RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 EPB41L4AQ9HCS5 686 aaPredicted RBP11.4□□□□□ -0.58
CCDC40-214ENST00000575431 ROBO3Q96MS0 1386 aa11.4□□□□□ -0.59
CCDC40-214ENST00000575431 TESPA1A2RU30 521 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-214ENST00000575431 AOC2O75106 756 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 CYP2D6P10635 497 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 PCP11498 1178 aaKnown RBP11.39□□□□□ -0.59
CCDC40-214ENST00000575431 CETPP11597 493 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 SHMT1P34896 483 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 PPARAQ07869 468 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 SNAPC2Q13487 334 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 ABCB5Q2M3G0 1257 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 SLC4A8Q2Y0W8 1093 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 MKNK2Q9HBH9 465 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-214ENST00000575431 CTNNA3Q9UI47 895 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 KCNH4Q9UQ05 1017 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 ZHX2Q9Y6X8 837 aa11.39□□□□□ -0.59
CCDC40-214ENST00000575431 ATAD5Q96QE3 1844 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 IRF6O14896 467 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 CDC45O75419 566 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 FGAP02671 866 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 CDK8P49336 464 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 VPS53Q5VIR6 699 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 KIAA1211Q6ZU35 1233 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 TMEM179Q6ZVK1 233 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 FASTKD5Q7L8L6 764 aaKnown RBP11.38□□□□□ -0.59
CCDC40-214ENST00000575431 ZNF589Q86UQ0 364 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-214ENST00000575431 ZNF280CQ8ND82 737 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 WDR18Q9BV38 432 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 ZCCHC17Q9NP64 241 aaKnown RBP11.38□□□□□ -0.59
CCDC40-214ENST00000575431 WBP1LQ9NX94 342 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 ANAPC4Q9UJX5 808 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 ZBTB21Q9ULJ3 1066 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 AFG3L2Q9Y4W6 797 aa11.38□□□□□ -0.59
CCDC40-214ENST00000575431 MYH8P13535 1937 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 CYP2D7A0A087X1C5 515 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 C19orf81C9J6K1 198 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 ZNF213O14771 459 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 FOXP2O15409 715 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 SGSM2O43147 1006 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 SLURP2P0DP57 97 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 GJA5P36382 358 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
CCDC40-214ENST00000575431 RRP1BQ14684 758 aaKnown RBP11.37□□□□□ -0.59
CCDC40-214ENST00000575431 ZNF444Q8N0Y2 327 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-214ENST00000575431 DYNLL2Q96FJ2 89 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 RNF41Q9H4P4 317 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-214ENST00000575431 SAGE1Q9NXZ1 904 aa11.37□□□□□ -0.59
CCDC40-214ENST00000575431 CCL15-CCL14A0A0B4J2E2 113 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 GDF11O95390 407 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 GH2P01242 217 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 SPP2Q13103 211 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 CCL15Q16663 113 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 IMMTQ16891 758 aaKnown RBP11.36□□□□□ -0.59
CCDC40-214ENST00000575431 PPP4R3BQ5MIZ7 849 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 SKAP1Q86WV1 359 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 IFNL1Q8IU54 200 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 ZIC5Q96T25 663 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 SH2D4AQ9H788 454 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 KANSL2Q9H9L4 492 aa11.36□□□□□ -0.59
CCDC40-214ENST00000575431 A0A0G2JLL6 359 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-214ENST00000575431 USP17L10C9JJH3 530 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 MPHOSPH10O00566 681 aaKnown RBP11.35□□□□□ -0.59
CCDC40-214ENST00000575431 EIF5BO60841 1220 aaKnown RBP11.35□□□□□ -0.59
CCDC40-214ENST00000575431 FGRP09769 529 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 USP14P54578 494 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 BACE1P56817 501 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 RAB3GAP1Q15042 981 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 PRRT2Q7Z6L0 340 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-214ENST00000575431 ANKRD23Q86SG2 305 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-214ENST00000575431 SLC44A5Q8NCS7 719 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 ESYT1Q9BSJ8 1104 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 CFHR5Q9BXR6 569 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 ARHGEF10LQ9HCE6 1279 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 SLC45A1Q9Y2W3 748 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-214ENST00000575431 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
CCDC40-214ENST00000575431 TRIM75PA6NK02 468 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 ORC4O43929 436 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 HSPA1AP0DMV8 641 aaKnown RBP11.34□□□□□ -0.59
CCDC40-214ENST00000575431 HSPA1BP0DMV9 641 aaKnown RBP11.34□□□□□ -0.59
CCDC40-214ENST00000575431 RASA1P20936 1047 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 EVX2Q03828 476 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 PABPC4Q13310 644 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC40-214ENST00000575431 NOM1Q5C9Z4 860 aaKnown RBP11.34□□□□□ -0.59
CCDC40-214ENST00000575431 MFSD6Q6ZSS7 791 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 BRI3BPQ8WY22 251 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 MAP4K1Q92918 833 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 KIAA1683Q9H0B3 1180 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 RNF186Q9NXI6 227 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 TMOD4Q9NZQ9 345 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 SYNPO2Q9UMS6 1093 aa11.34□□□□□ -0.59
CCDC40-214ENST00000575431 TSPY3P0CV98 308 aa11.33□□□□□ -0.6
CCDC40-214ENST00000575431 TSPY8P0CW00 308 aa11.33□□□□□ -0.6
CCDC40-214ENST00000575431 AKR1B1P15121 316 aa11.33□□□□□ -0.6
CCDC40-214ENST00000575431 GUCY1A2P33402 732 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms