RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ZNF697Q5TEC3 545 aa14.72□□□□□ -0.05
CTNS-208ENST00000574218 FAM109BQ6ICB4 259 aaPredicted RBP14.72□□□□□ -0.05
CTNS-208ENST00000574218 CRACR2BQ8N4Y2 399 aaPredicted RBP14.72□□□□□ -0.05
CTNS-208ENST00000574218 XAGE2Q96GT9 111 aa14.72□□□□□ -0.05
CTNS-208ENST00000574218 P2RX7Q99572 595 aaKnown RBP14.72□□□□□ -0.05
CTNS-208ENST00000574218 APBA2Q99767 749 aa14.72□□□□□ -0.05
CTNS-208ENST00000574218 PAGR1Q9BTK6 254 aa14.72□□□□□ -0.05
CTNS-208ENST00000574218 DHX36Q9H2U1 1008 aaKnown RBP14.72□□□□□ -0.05
CTNS-208ENST00000574218 COPRSQ9NQ92 184 aa14.72□□□□□ -0.05
CTNS-208ENST00000574218 PI4KBQ9UBF8 816 aa14.72□□□□□ -0.05
CTNS-208ENST00000574218 UNC80Q8N2C7 3258 aa14.72□□□□□ -0.05
CTNS-208ENST00000574218 MYH1P12882 1939 aa14.71□□□□□ -0.05
CTNS-208ENST00000574218 E9PSI1 815 aa14.71□□□□□ -0.05
CTNS-208ENST00000574218 BAG3O95817 575 aa14.71□□□□□ -0.05
CTNS-208ENST00000574218 COL6A1P12109 1028 aa14.71□□□□□ -0.05
CTNS-208ENST00000574218 CCND3P30281 292 aaPredicted RBP14.71□□□□□ -0.05
CTNS-208ENST00000574218 HOXA7P31268 230 aaPredicted RBP14.71□□□□□ -0.05
CTNS-208ENST00000574218 ERVK-9P63128 1117 aa14.71□□□□□ -0.05
CTNS-208ENST00000574218 ERVK-24P63145 666 aa14.71□□□□□ -0.05
CTNS-208ENST00000574218 ALDH1L2Q3SY69 923 aa14.71□□□□□ -0.05
CTNS-208ENST00000574218 PLEKHH3Q7Z736 793 aa14.71□□□□□ -0.05
CTNS-208ENST00000574218 FAM161BQ96MY7 647 aa14.71□□□□□ -0.05
CTNS-208ENST00000574218 USP17L10C9JJH3 530 aa14.7□□□□□ -0.06
CTNS-208ENST00000574218 PLCG2P16885 1265 aa14.7□□□□□ -0.06
CTNS-208ENST00000574218 CCNA1P78396 465 aa14.7□□□□□ -0.06
CTNS-208ENST00000574218 WDR78Q5VTH9 848 aa14.7□□□□□ -0.06
CTNS-208ENST00000574218 MFSD14CQ5VZR4 134 aa14.7□□□□□ -0.06
CTNS-208ENST00000574218 GPR142Q7Z601 462 aa14.7□□□□□ -0.06
CTNS-208ENST00000574218 SPATA5Q8NB90 893 aa14.7□□□□□ -0.06
CTNS-208ENST00000574218 NSUN4Q96CB9 384 aaKnown RBP14.7□□□□□ -0.06
CTNS-208ENST00000574218 SENP6Q9GZR1 1112 aaPredicted RBP14.7□□□□□ -0.06
CTNS-208ENST00000574218 GINM1Q9NU53 330 aa14.7□□□□□ -0.06
CTNS-208ENST00000574218 LRP2BPQ9P2M1 347 aa14.7□□□□□ -0.06
CTNS-208ENST00000574218 LTBP2Q14767 1821 aa14.69□□□□□ -0.06
CTNS-208ENST00000574218 CNGA1P29973 690 aa14.69□□□□□ -0.06
CTNS-208ENST00000574218 TFCP2Q12800 502 aa14.69□□□□□ -0.06
CTNS-208ENST00000574218 ATF7IPQ6VMQ6 1270 aa14.69□□□□□ -0.06
CTNS-208ENST00000574218 API5Q9BZZ5 524 aaKnown RBP14.69□□□□□ -0.06
CTNS-208ENST00000574218 TXNRD2Q9NNW7 524 aa14.69□□□□□ -0.06
CTNS-208ENST00000574218 HMG20BQ9P0W2 317 aa14.69□□□□□ -0.06
CTNS-208ENST00000574218 MSCO60682 206 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 HLA-DOAP06340 250 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 MAP2K5Q13163 448 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 RRP1BQ14684 758 aaKnown RBP14.68□□□□□ -0.06
CTNS-208ENST00000574218 CCL14Q16627 93 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 LHX8Q68G74 356 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 USP17L2Q6R6M4 530 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 TBC1D9Q6ZT07 1266 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 SH3RF3Q8TEJ3 882 aaPredicted RBP14.68□□□□□ -0.06
CTNS-208ENST00000574218 EDC3Q96F86 508 aaKnown RBP14.68□□□□□ -0.06
CTNS-208ENST00000574218 GUCD1Q96NT3 240 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 RBPJLQ9UBG7 517 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 IVNS1ABPQ9Y6Y0 642 aa14.68□□□□□ -0.06
CTNS-208ENST00000574218 MYO5AQ9Y4I1 1855 aaKnown RBP14.67□□□□□ -0.06
CTNS-208ENST00000574218 RLFQ13129 1914 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 POTEB2H3BUK9 544 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 SRGAP3O43295 1099 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 PEX10O60683 326 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 GDF11O95390 407 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 UQCRFS1P1P0C7P4 283 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 ATN1P54259 1190 aaPredicted RBP14.67□□□□□ -0.06
CTNS-208ENST00000574218 MORN1Q5T089 497 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 NAA16Q6N069 864 aaPredicted RBP14.67□□□□□ -0.06
CTNS-208ENST00000574218 FOXP4Q8IVH2 680 aaPredicted RBP14.67□□□□□ -0.06
CTNS-208ENST00000574218 ZNF384Q8TF68 577 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 USP6NLQ92738 828 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 FEZ1Q99689 392 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 PORCNQ9H237 461 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 AATFQ9NY61 560 aaKnown RBP eCLIP14.67□□□□□ -0.06
CTNS-208ENST00000574218 ZBTB21Q9ULJ3 1066 aa14.67□□□□□ -0.06
CTNS-208ENST00000574218 ZNF521Q96K83 1311 aa14.66□□□□□ -0.06
CTNS-208ENST00000574218 GNAI3P08754 354 aa14.66□□□□□ -0.06
CTNS-208ENST00000574218 ATP2B2Q01814 1243 aa14.66□□□□□ -0.06
CTNS-208ENST00000574218 Q3C1V9 767 aa14.66□□□□□ -0.06
CTNS-208ENST00000574218 MAPKAPK5Q8IW41 473 aa14.66□□□□□ -0.06
CTNS-208ENST00000574218 TGFBRAP1Q8WUH2 860 aa14.66□□□□□ -0.06
CTNS-208ENST00000574218 DDX20Q9UHI6 824 aaKnown RBP14.66□□□□□ -0.06
CTNS-208ENST00000574218 RABGAP1Q9Y3P9 1069 aa14.66□□□□□ -0.06
CTNS-208ENST00000574218 DNM1LO00429 736 aa14.65□□□□□ -0.06
CTNS-208ENST00000574218 ARID4AP29374 1257 aaPredicted RBP14.65□□□□□ -0.06
CTNS-208ENST00000574218 RTP1P59025 263 aa14.65□□□□□ -0.06
CTNS-208ENST00000574218 PI16Q6UXB8 463 aa14.65□□□□□ -0.06
CTNS-208ENST00000574218 MAFAQ8NHW3 353 aaPredicted RBP14.65□□□□□ -0.06
CTNS-208ENST00000574218 LPAR1Q92633 364 aa14.65□□□□□ -0.06
CTNS-208ENST00000574218 MEIS3Q99687 375 aa14.65□□□□□ -0.06
CTNS-208ENST00000574218 ATP11BQ9Y2G3 1177 aa14.65□□□□□ -0.06
CTNS-208ENST00000574218 FLT1P17948 1338 aa14.65□□□□□ -0.06
CTNS-208ENST00000574218 SLC15A5A6NIM6 579 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 USP17L15C9J2P7 530 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 USP17L13C9JLJ4 530 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 USP17L11C9JVI0 530 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 USP17L18D6R9N7 530 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 USP17L22D6RA61 530 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 USP17L17D6RBQ6 530 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 USP17L19D6RCP7 530 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 USP17L20D6RJB6 530 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 USP17L24Q0WX57 530 aa14.64□□□□□ -0.07
CTNS-208ENST00000574218 G3BP1Q13283 466 aaKnown RBP eCLIP14.64□□□□□ -0.07
CTNS-208ENST00000574218 ZYXQ15942 572 aaKnown RBP14.64□□□□□ -0.07
CTNS-208ENST00000574218 PRDM5Q9NQX1 630 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms