RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 EPB41L4AQ9HCS5 686 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC1-206ENST00000573989 ZHX2Q9Y6X8 837 aa15.22■□□□□ 0.03
TRAPPC1-206ENST00000573989 ZMYM6O95789 1325 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 CXCL11O14625 94 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 IRF6O14896 467 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 GDF11O95390 407 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 ALDH1A1P00352 501 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 HSPD1P10809 573 aaKnown RBP15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 CHMLP26374 656 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 SHMT1P34896 483 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 CDK8P49336 464 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 PDE4BQ07343 736 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 ALX1Q15699 326 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 ABCB5Q2M3G0 1257 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 C16orf86Q6ZW13 317 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 ZNF589Q86UQ0 364 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 CNKSR2Q8WXI2 1034 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 CCDC17Q96LX7 622 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 ZIC5Q96T25 663 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 MKNK2Q9HBH9 465 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 WBP1LQ9NX94 342 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 PHIPQ8WWQ0 1821 aa15.21■□□□□ 0.03
TRAPPC1-206ENST00000573989 CYP2D7A0A087X1C5 515 aa15.2■□□□□ 0.02
TRAPPC1-206ENST00000573989 CCL15-CCL14A0A0B4J2E2 113 aa15.2■□□□□ 0.02
TRAPPC1-206ENST00000573989 MPHOSPH10O00566 681 aaKnown RBP15.2■□□□□ 0.02
TRAPPC1-206ENST00000573989 GJA5P36382 358 aa15.2■□□□□ 0.02
TRAPPC1-206ENST00000573989 CCL15Q16663 113 aa15.2■□□□□ 0.02
TRAPPC1-206ENST00000573989 DYNLL2Q96FJ2 89 aa15.2■□□□□ 0.02
TRAPPC1-206ENST00000573989 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
TRAPPC1-206ENST00000573989 KCNH4Q9UQ05 1017 aa15.2■□□□□ 0.02
TRAPPC1-206ENST00000573989 ROBO3Q96MS0 1386 aa15.2■□□□□ 0.02
TRAPPC1-206ENST00000573989 GH2P01242 217 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 PPARAQ07869 468 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 RAB3GAP1Q15042 981 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 VPS53Q5VIR6 699 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 FASTKD5Q7L8L6 764 aaKnown RBP15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 DSCC1Q9BVC3 393 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 SAGE1Q9NXZ1 904 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 AFG3L2Q9Y4W6 797 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 PTPRFP10586 1907 aa15.19■□□□□ 0.02
TRAPPC1-206ENST00000573989 TESPA1A2RU30 521 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 FGAP02671 866 aa15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 HSPA1AP0DMV8 641 aaKnown RBP15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 HSPA1BP0DMV9 641 aaKnown RBP15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 RRP1BQ14684 758 aaKnown RBP15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 TMEM179Q6ZVK1 233 aa15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 SKAP1Q86WV1 359 aa15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 IFNL1Q8IU54 200 aa15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 SLC44A5Q8NCS7 719 aa15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 MS4A4AQ96JQ5 239 aa15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 WDR18Q9BV38 432 aa15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 PCNTO95613 3336 aa15.18■□□□□ 0.02
TRAPPC1-206ENST00000573989 TRIM75PA6NK02 468 aa15.17■□□□□ 0.02
TRAPPC1-206ENST00000573989 EVX2Q03828 476 aa15.17■□□□□ 0.02
TRAPPC1-206ENST00000573989 SPP2Q13103 211 aa15.17■□□□□ 0.02
TRAPPC1-206ENST00000573989 KIAA1211Q6ZU35 1233 aa15.17■□□□□ 0.02
TRAPPC1-206ENST00000573989 STK11IPQ8N1F8 1099 aa15.17■□□□□ 0.02
TRAPPC1-206ENST00000573989 ZCCHC17Q9NP64 241 aaKnown RBP15.17■□□□□ 0.02
TRAPPC1-206ENST00000573989 ANAPC4Q9UJX5 808 aa15.17■□□□□ 0.02
TRAPPC1-206ENST00000573989 A0A0G2JLL6 359 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 C19orf81C9J6K1 198 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 USP17L10C9JJH3 530 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 ZNF213O14771 459 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 FOXP2O15409 715 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 SGSM2O43147 1006 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 CDC45O75419 566 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 TRPA1O75762 1119 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 PCP11498 1178 aaKnown RBP15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 CTCFP49711 727 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 PRRT2Q7Z6L0 340 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 BRI3BPQ8WY22 251 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 FEZ1Q99689 392 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 RNF186Q9NXI6 227 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 TMOD4Q9NZQ9 345 aa15.16■□□□□ 0.02
TRAPPC1-206ENST00000573989 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 TSPY3P0CV98 308 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 TSPY8P0CW00 308 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 USP14P54578 494 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 BACE1P56817 501 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 IMMTQ16891 758 aaKnown RBP15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 PPP4R3BQ5MIZ7 849 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 GADL1Q6ZQY3 521 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 ANKRD23Q86SG2 305 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 PROCA1Q8NCQ7 364 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 RNF41Q9H4P4 317 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 SH2D4AQ9H788 454 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 KANSL2Q9H9L4 492 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 ARHGEF10LQ9HCE6 1279 aa15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC1-206ENST00000573989 IGF2BP3O00425 579 aaKnown RBP eCLIP15.14■□□□□ 0.01
TRAPPC1-206ENST00000573989 AKR1B1P15121 316 aa15.14■□□□□ 0.01
TRAPPC1-206ENST00000573989 RASA1P20936 1047 aa15.14■□□□□ 0.01
TRAPPC1-206ENST00000573989 NT5C2P49902 561 aa15.14■□□□□ 0.01
TRAPPC1-206ENST00000573989 CTDSPL2Q05D32 466 aa15.14■□□□□ 0.01
TRAPPC1-206ENST00000573989 PABPC4Q13310 644 aaKnown RBP eCLIP15.14■□□□□ 0.015e-7■■■□□ 16
TRAPPC1-206ENST00000573989 SEPT2Q15019 361 aa15.14■□□□□ 0.01
TRAPPC1-206ENST00000573989 MFSD6Q6ZSS7 791 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms