RNA–Protein interactions for RNA: ENST00000572621.5

PRPF8-205, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF8, Length 7,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-205ENST00000572621 NELFBQ8WX92 580 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 ZC3H12CQ9C0D7 883 aaKnown RBP15.3■□□□□ 0.04
PRPF8-205ENST00000572621 HELLSQ9NRZ9 838 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 CTNNA1P35221 906 aaKnown RBP15.3■□□□□ 0.04
PRPF8-205ENST00000572621 LIG3P49916 1009 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 PRR16Q569H4 304 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 HERC4Q5GLZ8 1057 aaPredicted RBP15.3■□□□□ 0.04
PRPF8-205ENST00000572621 WHAMMQ8TF30 809 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 ACSBG1Q96GR2 724 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 UIMC1Q96RL1 719 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 LMBRD1Q9NUN5 540 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 NSFL1CQ9UNZ2 370 aaKnown RBP15.3■□□□□ 0.04
PRPF8-205ENST00000572621 MSH6P52701 1360 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 SESN3P58005 492 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 SYCE1Q8N0S2 351 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 OTUD7AQ8TE49 926 aaPredicted RBP15.3■□□□□ 0.04
PRPF8-205ENST00000572621 RAB3IPQ96QF0 476 aaPredicted RBP15.3■□□□□ 0.04
PRPF8-205ENST00000572621 MYO1AQ9UBC5 1043 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 SAP30BPQ9UHR5 308 aaKnown RBP15.3■□□□□ 0.04
PRPF8-205ENST00000572621 B4DLN1 442 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 TRPC3Q13507 836 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 C2CD5Q86YS7 1000 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 RAB17Q9H0T7 212 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 FAM207AQ9NSI2 230 aaPredicted RBP15.3■□□□□ 0.04
PRPF8-205ENST00000572621 SNX14Q9Y5W7 946 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 DYMQ7RTS9 669 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 CCDC89Q8N998 374 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 BCAS4Q8TDM0 211 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 TTLL3Q9Y4R7 772 aa15.3■□□□□ 0.04
PRPF8-205ENST00000572621 RRAGAQ7L523 313 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 LRRC43Q8N309 656 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 ARHGAP42A6NI28 874 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 TRIM6Q9C030 488 aaPredicted RBP15.29■□□□□ 0.04
PRPF8-205ENST00000572621 TMEM63CQ9P1W3 806 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 TPX2Q9ULW0 747 aaKnown RBP15.29■□□□□ 0.04
PRPF8-205ENST00000572621 NLRC4Q9NPP4 1024 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 TTC38Q5R3I4 469 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 DIS3L2Q8IYB7 885 aaKnown RBP15.29■□□□□ 0.04
PRPF8-205ENST00000572621 ATP2A3Q93084 1043 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 TMEM87BQ96K49 555 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 IRS4O14654 1257 aaPredicted RBP15.29■□□□□ 0.04
PRPF8-205ENST00000572621 BRD3Q15059 726 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 FAM227BQ96M60 508 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 WWC3Q9ULE0 1092 aa15.29■□□□□ 0.04
PRPF8-205ENST00000572621 SFMBT2Q5VUG0 894 aa15.28■□□□□ 0.04
PRPF8-205ENST00000572621 HAUS3Q68CZ6 603 aa15.28■□□□□ 0.04
PRPF8-205ENST00000572621 GABPB2Q8TAK5 448 aaPredicted RBP15.28■□□□□ 0.04
PRPF8-205ENST00000572621 VPS37BQ9H9H4 285 aa15.28■□□□□ 0.04
PRPF8-205ENST00000572621 RNF168Q8IYW5 571 aaPredicted RBP15.28■□□□□ 0.04
PRPF8-205ENST00000572621 KLHL14Q9P2G3 628 aa15.28■□□□□ 0.04
PRPF8-205ENST00000572621 GCNT3O95395 438 aa15.28■□□□□ 0.04
PRPF8-205ENST00000572621 TROVE2P10155 538 aaKnown RBP eCLIP15.28■□□□□ 0.04
PRPF8-205ENST00000572621 DESI2Q9BSY9 194 aa15.28■□□□□ 0.04
PRPF8-205ENST00000572621 KDM2BQ8NHM5 1336 aa15.28■□□□□ 0.04
PRPF8-205ENST00000572621 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
PRPF8-205ENST00000572621 CCDC117Q8IWD4 279 aaPredicted RBP15.28■□□□□ 0.04
PRPF8-205ENST00000572621 BCRP11274 1271 aa15.27■□□□□ 0.04
PRPF8-205ENST00000572621 KIF14Q15058 1648 aa15.27■□□□□ 0.04
PRPF8-205ENST00000572621 MGEA5O60502 916 aa15.27■□□□□ 0.04
PRPF8-205ENST00000572621 PPFIA4O75335 1185 aa15.27■□□□□ 0.04
PRPF8-205ENST00000572621 EIF6P56537 245 aaKnown RBP15.27■□□□□ 0.04
PRPF8-205ENST00000572621 CCDC84Q86UT8 332 aaPredicted RBP15.27■□□□□ 0.04
PRPF8-205ENST00000572621 DZIP3Q86Y13 1208 aaKnown RBP15.27■□□□□ 0.04
PRPF8-205ENST00000572621 CTAGE3PQ8IX95 158 aa15.27■□□□□ 0.04
PRPF8-205ENST00000572621 STAG1Q8WVM7 1258 aa15.27■□□□□ 0.04
PRPF8-205ENST00000572621 FRMD3A2A2Y4 597 aa15.27■□□□□ 0.04
PRPF8-205ENST00000572621 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.04
PRPF8-205ENST00000572621 EIF4A2Q14240 407 aaKnown RBP15.27■□□□□ 0.04
PRPF8-205ENST00000572621 RPS6KA2Q15349 733 aa15.27■□□□□ 0.04
PRPF8-205ENST00000572621 JAK2O60674 1132 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 GABPAQ06546 454 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 PNOCQ13519 176 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 LONRF2Q1L5Z9 754 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 BSPRYQ5W0U4 402 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 CAPS2Q9BXY5 557 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 TSPYL2Q9H2G4 693 aaPredicted RBP15.27■□□□□ 0.03
PRPF8-205ENST00000572621 VCX3AQ9NNX9 186 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 LRMPQ12912 555 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 C14orf93Q9H972 538 aaKnown RBP15.27■□□□□ 0.03
PRPF8-205ENST00000572621 PHLDB3Q6NSJ2 640 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 BLZF1Q9H2G9 400 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 PARP2Q9UGN5 583 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 USH1CQ9Y6N9 552 aa15.27■□□□□ 0.03
PRPF8-205ENST00000572621 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
PRPF8-205ENST00000572621 MRPL44Q9H9J2 332 aaKnown RBP15.26■□□□□ 0.03
PRPF8-205ENST00000572621 ZBTB7BO15156 539 aaPredicted RBP15.26■□□□□ 0.03
PRPF8-205ENST00000572621 PTPROQ16827 1216 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 ZNF215Q9UL58 517 aaPredicted RBP15.26■□□□□ 0.03
PRPF8-205ENST00000572621 ARHGAP44Q17R89 818 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
PRPF8-205ENST00000572621 NELFCDQ8IXH7 590 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 HINFPQ9BQA5 517 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 KCNK3O14649 394 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 RIMBP2O15034 1052 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 SMIM24O75264 130 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 NR1I2O75469 434 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 SNX29Q8TEQ0 813 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 MYL10Q9BUA6 226 aa15.26■□□□□ 0.03
PRPF8-205ENST00000572621 AMFRQ9UKV5 643 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms