RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 IRF6O14896 467 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 CA12O43570 354 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 CYP2D6P10635 497 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 PTPRAP18433 802 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 INHBEP58166 350 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 TTC22Q5TAA0 569 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 C12orf60Q5U649 245 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 ASTLQ6HA08 431 aaPredicted RBP11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 TATDN1Q6P1N9 297 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 DDRGK1Q96HY6 314 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 FAM227BQ96M60 508 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 TSPYL2Q9H2G4 693 aaPredicted RBP11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 EPB41L4AQ9HCS5 686 aaPredicted RBP11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 METRNQ9UJH8 293 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 DOCK1Q14185 1865 aa11.5□□□□□ -0.57
HCCAT5-201ENST00000569990 CYP2D7A0A087X1C5 515 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 PATL2C9JE40 543 aaKnown RBP11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 SMIM22K7EJ46 135 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 SDSP20132 328 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 CTCFP49711 727 aaPredicted RBP11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 GTF2A2P52657 109 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 JAG1P78504 1218 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 NMIQ13287 307 aaPredicted RBP11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 CTR9Q6PD62 1173 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 CCDC129Q6ZRS4 1044 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 BRI3BPQ8WY22 251 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 HELLSQ9NRZ9 838 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 RNF186Q9NXI6 227 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 SAGE1Q9NXZ1 904 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 ARPP21Q9UBL0 812 aaPredicted RBP11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 KCNH4Q9UQ05 1017 aa11.49□□□□□ -0.57
HCCAT5-201ENST00000569990 CCL15-CCL14A0A0B4J2E2 113 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 IGF2BP3O00425 579 aaKnown RBP eCLIP11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 FOXP2O15409 715 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 TRPA1O75762 1119 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 GDF11O95390 407 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 ASNSP08243 561 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 HSPA8P11142 646 aaKnown RBP11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 SHMT1P34896 483 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 SNAPC2Q13487 334 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 CCL15Q16663 113 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 SHROOM1Q2M3G4 852 aaPredicted RBP11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 MCMDC2Q4G0Z9 681 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 ERICH6BQ5W0A0 696 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 CCDC84Q86UT8 332 aaPredicted RBP11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 IFNL1Q8IU54 200 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 AMOTL1Q8IY63 956 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 SLC44A5Q8NCS7 719 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 SLC39A7Q92504 469 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 PTPN18Q99952 460 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 GINM1Q9NU53 330 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 SWAP70Q9UH65 585 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 TSKSQ9UJT2 592 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 AFG3L2Q9Y4W6 797 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 ZHX2Q9Y6X8 837 aa11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 BAZ2AQ9UIF9 1905 aaKnown RBP11.48□□□□□ -0.57
HCCAT5-201ENST00000569990 HIP1O00291 1037 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 CXCL11O14625 94 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 APPP05067 770 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 CETPP11597 493 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 TDO2P48775 406 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 VPS53Q5VIR6 699 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 ZNF589Q86UQ0 364 aaPredicted RBP11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 SKAP1Q86WV1 359 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 IFNL3Q8IZI9 196 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 DYNLL2Q96FJ2 89 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 NACAP1Q9BZK3 213 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 DIAPH3Q9NSV4 1193 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
HCCAT5-201ENST00000569990 PHIPQ8WWQ0 1821 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 ATAD5Q96QE3 1844 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 ROBO3Q96MS0 1386 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 CCDC171Q6TFL3 1326 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 A0A0G2JLL6 359 aaPredicted RBP11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 TRIM75PA6NK02 468 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 USP17L5A8MUK1 530 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 ALDH1A1P00352 501 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 GH2P01242 217 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 C7P10643 843 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 LBX1P52954 281 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 MOGSQ13724 837 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 C16orf86Q6ZW13 317 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 PRRT2Q7Z6L0 340 aaPredicted RBP11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 FAM43AQ8N2R8 423 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 ZNF280CQ8ND82 737 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 WDR18Q9BV38 432 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 CFHR5Q9BXR6 569 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 TBC1D2Q9BYX2 928 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 NAPBQ9H115 298 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
HCCAT5-201ENST00000569990 POTEMA6NI47 508 aa11.45□□□□□ -0.58
HCCAT5-201ENST00000569990 MINDY4BA8MYZ0 360 aa11.45□□□□□ -0.58
HCCAT5-201ENST00000569990 BTBD19C9JJ37 291 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms