RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 SOGA3Q5TF21 947 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 SPTY2D1Q68D10 685 aaPredicted RBP11.93□□□□□ -0.5
GDE1-205ENST00000569899 IL17RAQ96F46 866 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 BCS1LQ9Y276 419 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 DICER1Q9UPY3 1922 aaKnown RBP11.93□□□□□ -0.5
GDE1-205ENST00000569899 RABEP1Q15276 862 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 PPP2R2DQ66LE6 453 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 BRICD5Q6PL45 260 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 CERS5Q8N5B7 392 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 KCNB2Q92953 911 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 THAP11Q96EK4 314 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 IPO9Q96P70 1041 aaKnown RBP11.93□□□□□ -0.5
GDE1-205ENST00000569899 STRBPQ96SI9 672 aaKnown RBP11.93□□□□□ -0.5
GDE1-205ENST00000569899 MXD3Q9BW11 206 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 KCNQ5Q9NR82 932 aa11.93□□□□□ -0.5
GDE1-205ENST00000569899 ZNF277Q9NRM2 450 aaPredicted RBP11.93□□□□□ -0.5
GDE1-205ENST00000569899 RPAP1Q9BWH6 1393 aaPredicted RBP11.92□□□□□ -0.5
GDE1-205ENST00000569899 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
GDE1-205ENST00000569899 CD2BP2O95400 341 aaKnown RBP11.92□□□□□ -0.5
GDE1-205ENST00000569899 DYNLL1P63167 89 aaKnown RBP11.92□□□□□ -0.5
GDE1-205ENST00000569899 TTLL5Q6EMB2 1281 aa11.92□□□□□ -0.5
GDE1-205ENST00000569899 PODNQ7Z5L7 613 aa11.92□□□□□ -0.5
GDE1-205ENST00000569899 TBC1D22AQ8WUA7 517 aa11.92□□□□□ -0.5
GDE1-205ENST00000569899 ZNF516Q92618 1163 aa11.92□□□□□ -0.5
GDE1-205ENST00000569899 RIOK1Q9BRS2 568 aaKnown RBP11.92□□□□□ -0.5
GDE1-205ENST00000569899 FHDC1Q9C0D6 1143 aaPredicted RBP11.92□□□□□ -0.5
GDE1-205ENST00000569899 IL21Q9HBE4 155 aa11.92□□□□□ -0.5
GDE1-205ENST00000569899 EPB41L4AQ9HCS5 686 aaPredicted RBP11.92□□□□□ -0.5
GDE1-205ENST00000569899 SBF1O95248 1867 aa11.91□□□□□ -0.5
GDE1-205ENST00000569899 MYH1P12882 1939 aa11.91□□□□□ -0.5
GDE1-205ENST00000569899 YDJCA8MPS7 323 aa11.91□□□□□ -0.5
GDE1-205ENST00000569899 NFKBIEO00221 500 aa11.91□□□□□ -0.5
GDE1-205ENST00000569899 PRKAB2O43741 272 aa11.91□□□□□ -0.5
GDE1-205ENST00000569899 CYP21A2P08686 494 aa11.91□□□□□ -0.5
GDE1-205ENST00000569899 ADCK5Q3MIX3 580 aa11.91□□□□□ -0.5
GDE1-205ENST00000569899 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
GDE1-205ENST00000569899 UPF3BQ9BZI7 483 aaKnown RBP11.91□□□□□ -0.5
GDE1-205ENST00000569899 AATFQ9NY61 560 aaKnown RBP eCLIP11.91□□□□□ -0.5
GDE1-205ENST00000569899 MROH7-TTC4A0A0A0MT08 1334 aa11.91□□□□□ -0.5
GDE1-205ENST00000569899 COL9A3Q14050 684 aaPredicted RBP11.9□□□□□ -0.5
GDE1-205ENST00000569899 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
GDE1-205ENST00000569899 SDR42E1Q8WUS8 393 aa11.9□□□□□ -0.5
GDE1-205ENST00000569899 JAKMIP1Q96N16 626 aaKnown RBP11.9□□□□□ -0.5
GDE1-205ENST00000569899 TAOK3Q9H2K8 898 aa11.9□□□□□ -0.5
GDE1-205ENST00000569899 SLC4A4Q9Y6R1 1079 aa11.9□□□□□ -0.5
GDE1-205ENST00000569899 GSG1L2A8MUP6 293 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
GDE1-205ENST00000569899 TLL1O43897 1013 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 FMNL1O95466 1100 aaPredicted RBP11.89□□□□□ -0.51
GDE1-205ENST00000569899 FGAP02671 866 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 APPP05067 770 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 CPA1P15085 419 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 ZKSCAN1P17029 563 aaPredicted RBP11.89□□□□□ -0.51
GDE1-205ENST00000569899 RFC5P40937 340 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
GDE1-205ENST00000569899 HAND2P61296 217 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 RASSF7Q02833 373 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 ZMYM6O95789 1325 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 IGSF3O75054 1194 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
GDE1-205ENST00000569899 GSTO1P78417 241 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 TMED8Q6PL24 325 aaPredicted RBP11.89□□□□□ -0.51
GDE1-205ENST00000569899 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
GDE1-205ENST00000569899 GAKO14976 1311 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 MYH8P13535 1937 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 PATL2C9JE40 543 aaKnown RBP11.88□□□□□ -0.51
GDE1-205ENST00000569899 GNAT2P19087 354 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 NEK4P51957 841 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 BECN1Q14457 450 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 IMMTQ16891 758 aaKnown RBP11.88□□□□□ -0.51
GDE1-205ENST00000569899 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 RETREG3Q86VR2 466 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 IFNL3Q8IZI9 196 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 SNX21Q969T3 373 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 NAPBQ9H115 298 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 CTNNA3Q9UI47 895 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 TTF2Q9UNY4 1162 aaKnown RBP11.88□□□□□ -0.51
GDE1-205ENST00000569899 SUGT1Q9Y2Z0 365 aa11.88□□□□□ -0.51
GDE1-205ENST00000569899 CFAP99D6REC4 459 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 BTDP43251 543 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 TDO2P48775 406 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 SCNN1DP51172 638 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 FKBP1AP62942 108 aaKnown RBP11.87□□□□□ -0.51
GDE1-205ENST00000569899 ALX1Q15699 326 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 TSGA10IPQ3SY00 556 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 KIAA0825Q8IV33 1275 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 NIM1KQ8IY84 436 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
GDE1-205ENST00000569899 USB1Q9BQ65 265 aaKnown RBP11.87□□□□□ -0.51
GDE1-205ENST00000569899 DAGLAQ9Y4D2 1042 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 LTBP3Q9NS15 1303 aa11.87□□□□□ -0.51
GDE1-205ENST00000569899 RAD17O75943 681 aa11.86□□□□□ -0.51
GDE1-205ENST00000569899 LDHCP07864 332 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms