RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 Q3C1V9 767 aa15.39■□□□□ 0.05
SNX29-207ENST00000568949 MORN1Q5T089 497 aa15.39■□□□□ 0.05
SNX29-207ENST00000568949 GPR142Q7Z601 462 aa15.39■□□□□ 0.05
SNX29-207ENST00000568949 PLEKHH3Q7Z736 793 aa15.39■□□□□ 0.05
SNX29-207ENST00000568949 CCAR1Q8IX12 1150 aaKnown RBP15.39■□□□□ 0.05
SNX29-207ENST00000568949 GUCD1Q96NT3 240 aa15.39■□□□□ 0.05
SNX29-207ENST00000568949 APBA2Q99767 749 aa15.39■□□□□ 0.05
SNX29-207ENST00000568949 SMC4Q9NTJ3 1288 aa15.39■□□□□ 0.05
SNX29-207ENST00000568949 USP17L10C9JJH3 530 aa15.38■□□□□ 0.05
SNX29-207ENST00000568949 PEX10O60683 326 aa15.38■□□□□ 0.05
SNX29-207ENST00000568949 CCL14Q16627 93 aa15.38■□□□□ 0.05
SNX29-207ENST00000568949 TBC1D9Q6ZT07 1266 aa15.38■□□□□ 0.05
SNX29-207ENST00000568949 METTL16Q86W50 562 aaKnown RBP15.38■□□□□ 0.05
SNX29-207ENST00000568949 FOXP4Q8IVH2 680 aaPredicted RBP15.38■□□□□ 0.05
SNX29-207ENST00000568949 LBHD1Q9BQE6 289 aaPredicted RBP15.38■□□□□ 0.05
SNX29-207ENST00000568949 PORCNQ9H237 461 aa15.38■□□□□ 0.05
SNX29-207ENST00000568949 RAI14Q9P0K7 980 aa15.38■□□□□ 0.05
SNX29-207ENST00000568949 SIPA1L1O43166 1804 aa15.38■□□□□ 0.05
SNX29-207ENST00000568949 BAG3O95817 575 aa15.37■□□□□ 0.05
SNX29-207ENST00000568949 PLCG2P16885 1265 aa15.37■□□□□ 0.05
SNX29-207ENST00000568949 ARID4AP29374 1257 aaPredicted RBP15.37■□□□□ 0.05
SNX29-207ENST00000568949 SLFN5Q08AF3 891 aa15.37■□□□□ 0.05
SNX29-207ENST00000568949 SH3RF3Q8TEJ3 882 aaPredicted RBP15.37■□□□□ 0.05
SNX29-207ENST00000568949 NEUROD6Q96NK8 337 aa15.37■□□□□ 0.05
SNX29-207ENST00000568949 NOL10Q9BSC4 688 aaKnown RBP15.37■□□□□ 0.05
SNX29-207ENST00000568949 API5Q9BZZ5 524 aaKnown RBP15.37■□□□□ 0.05
SNX29-207ENST00000568949 FRMPD3Q5JV73 1810 aa15.37■□□□□ 0.05
SNX29-207ENST00000568949 MSCO60682 206 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 JAG1P78504 1218 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 MAP2K5Q13163 448 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 MTX1Q13505 466 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 GORABQ5T7V8 394 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 POTEEQ6S8J3 1075 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 PI16Q6UXB8 463 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 MEIS3Q99687 375 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 SENP6Q9GZR1 1112 aaPredicted RBP15.36■□□□□ 0.05
SNX29-207ENST00000568949 DNAJC18Q9H819 358 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 LRP2BPQ9P2M1 347 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 MAST2Q6P0Q8 1798 aa15.36■□□□□ 0.05
SNX29-207ENST00000568949 SRGAP3O43295 1099 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 GLRX3O76003 335 aaKnown RBP15.35■□□□□ 0.05
SNX29-207ENST00000568949 UQCRFS1P1P0C7P4 283 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 PPP4CP60510 307 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 ZNF697Q5TEC3 545 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 MFSD14CQ5VZR4 134 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 USP17L2Q6R6M4 530 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 EDC3Q96F86 508 aaKnown RBP15.35■□□□□ 0.05
SNX29-207ENST00000568949 PAGR1Q9BTK6 254 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 TRIM34Q9BYJ4 488 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 ZBTB21Q9ULJ3 1066 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 NOB1Q9ULX3 412 aaKnown RBP15.35■□□□□ 0.05
SNX29-207ENST00000568949 RABGAP1Q9Y3P9 1069 aa15.35■□□□□ 0.05
SNX29-207ENST00000568949 GNAI3P08754 354 aa15.34■□□□□ 0.05
SNX29-207ENST00000568949 MCAMP43121 646 aa15.34■□□□□ 0.05
SNX29-207ENST00000568949 CCNA1P78396 465 aa15.34■□□□□ 0.05
SNX29-207ENST00000568949 CRACR2BQ8N4Y2 399 aaPredicted RBP15.34■□□□□ 0.05
SNX29-207ENST00000568949 TGFBRAP1Q8WUH2 860 aa15.34■□□□□ 0.05
SNX29-207ENST00000568949 LPAR1Q92633 364 aa15.34■□□□□ 0.05
SNX29-207ENST00000568949 CWC22Q9HCG8 908 aaKnown RBP15.34■□□□□ 0.05
SNX29-207ENST00000568949 EMILIN3Q9NT22 766 aa15.34■□□□□ 0.05
SNX29-207ENST00000568949 AATFQ9NY61 560 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNX29-207ENST00000568949 DDX20Q9UHI6 824 aaKnown RBP15.34■□□□□ 0.05
SNX29-207ENST00000568949 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.34■□□□□ 0.05
SNX29-207ENST00000568949 FOCADQ5VW36 1801 aa15.33■□□□□ 0.05
SNX29-207ENST00000568949 CDK5RAP2Q96SN8 1893 aa15.33■□□□□ 0.05
SNX29-207ENST00000568949 SLC15A5A6NIM6 579 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 DNM1LO00429 736 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 IGSF3O75054 1194 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 GDF11O95390 407 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 HOXC6P09630 235 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 CT47B1P0C2W7 299 aaPredicted RBP15.33■□□□□ 0.04
SNX29-207ENST00000568949 NAA16Q6N069 864 aaPredicted RBP15.33■□□□□ 0.04
SNX29-207ENST00000568949 MAPKAPK5Q8IW41 473 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 C12orf42Q96LP6 360 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 FAM161BQ96MY7 647 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 PRKAG2Q9UGJ0 569 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 FLT1P17948 1338 aa15.33■□□□□ 0.04
SNX29-207ENST00000568949 USP17L15C9J2P7 530 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 USP17L13C9JLJ4 530 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 USP17L11C9JVI0 530 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 USP17L18D6R9N7 530 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 USP17L22D6RA61 530 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 USP17L17D6RBQ6 530 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 USP17L19D6RCP7 530 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 USP17L20D6RJB6 530 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 CNMDO75829 334 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 HLA-DOAP06340 250 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 PTPREP23469 700 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 USP17L24Q0WX57 530 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 SHROOM1Q2M3G4 852 aaPredicted RBP15.32■□□□□ 0.04
SNX29-207ENST00000568949 ATF7IPQ6VMQ6 1270 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 FLRT1Q9NZU1 646 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 PALD1Q9ULE6 856 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 UNC80Q8N2C7 3258 aa15.32■□□□□ 0.04
SNX29-207ENST00000568949 LTBP2Q14767 1821 aa15.31■□□□□ 0.04
SNX29-207ENST00000568949 ATN1P54259 1190 aaPredicted RBP15.31■□□□□ 0.04
SNX29-207ENST00000568949 ATP2B2Q01814 1243 aa15.31■□□□□ 0.04
SNX29-207ENST00000568949 LBX2Q6XYB7 198 aa15.31■□□□□ 0.04
SNX29-207ENST00000568949 CDX2Q99626 313 aaPredicted RBP15.31■□□□□ 0.04
SNX29-207ENST00000568949 USP14P54578 494 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms