RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 PXDNQ92626 1479 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 TMEM94Q12767 1356 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 SYNRGQ9UMZ2 1314 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 LMTK3Q96Q04 1460 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 SHTN1A0MZ66 631 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 FOXP2O15409 715 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 GGCXP38435 758 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 ATP6V1AP38606 617 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 MNAT1P51948 309 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 ATXN2Q99700 1313 aaKnown RBP28.3■■■□□ 2.12
FANCA-221ENST00000566889 GOLGA6CA6NDK9 693 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 PSMD14O00487 310 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 ZNF213O14771 459 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 GOLGA6DP0CG33 693 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 FXR1P51114 621 aaKnown RBP eCLIP28.3■■■□□ 2.12
FANCA-221ENST00000566889 CKAP4Q07065 602 aaKnown RBP28.3■■■□□ 2.12
FANCA-221ENST00000566889 KAT14Q9H8E8 782 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 GOLGA6AQ9NYA3 693 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 A6NNZ2 444 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 ERVK-24P63145 666 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 TUBB8Q3ZCM7 444 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 ESF1Q9H501 851 aaKnown RBP28.3■■■□□ 2.12
FANCA-221ENST00000566889 ABHD10Q9NUJ1 306 aa28.3■■■□□ 2.12
FANCA-221ENST00000566889 CLGNO14967 610 aa28.29■■■□□ 2.12
FANCA-221ENST00000566889 ACTN4O43707 911 aaKnown RBP28.29■■■□□ 2.12
FANCA-221ENST00000566889 MYL6BP14649 208 aa28.29■■■□□ 2.12
FANCA-221ENST00000566889 IL15P40933 162 aaPredicted RBP28.29■■■□□ 2.12
FANCA-221ENST00000566889 ATG9AQ7Z3C6 839 aa28.29■■■□□ 2.12
FANCA-221ENST00000566889 NOSTRINQ8IVI9 506 aa28.29■■■□□ 2.12
FANCA-221ENST00000566889 TACO1Q9BSH4 297 aaKnown RBP28.29■■■□□ 2.12
FANCA-221ENST00000566889 CEP83Q9Y592 693 aa28.29■■■□□ 2.12
FANCA-221ENST00000566889 SLIT3O75094 1523 aa28.29■■■□□ 2.12
FANCA-221ENST00000566889 KIF1CO43896 1103 aaKnown RBP28.28■■■□□ 2.12
FANCA-221ENST00000566889 IARSP41252 1262 aaKnown RBP28.28■■■□□ 2.12
FANCA-221ENST00000566889 SPECC1Q5M775 1068 aa28.28■■■□□ 2.12
FANCA-221ENST00000566889 CNPY4Q8N129 248 aa28.28■■■□□ 2.12
FANCA-221ENST00000566889 TIMM10P62072 90 aa28.28■■■□□ 2.12
FANCA-221ENST00000566889 CUL4BQ13620 913 aa28.28■■■□□ 2.12
FANCA-221ENST00000566889 DONSONQ9NYP3 566 aa28.28■■■□□ 2.12
FANCA-221ENST00000566889 STK36Q9NRP7 1315 aa28.28■■■□□ 2.12
FANCA-221ENST00000566889 NFAT5O94916 1531 aa28.28■■■□□ 2.12
FANCA-221ENST00000566889 ABL1P00519 1130 aa28.27■■■□□ 2.12
FANCA-221ENST00000566889 INPP5BP32019 993 aa28.27■■■□□ 2.12
FANCA-221ENST00000566889 SETQ01105 290 aaPredicted RBP28.27■■■□□ 2.12
FANCA-221ENST00000566889 CAPS2Q9BXY5 557 aa28.27■■■□□ 2.12
FANCA-221ENST00000566889 AFDNP55196 1824 aaKnown RBP28.27■■■□□ 2.12
FANCA-221ENST00000566889 AGPSO00116 658 aa28.27■■■□□ 2.12
FANCA-221ENST00000566889 HAUS4Q9H6D7 363 aa28.27■■■□□ 2.12
FANCA-221ENST00000566889 A1CFQ9NQ94 594 aaKnown RBP28.27■■■□□ 2.12
FANCA-221ENST00000566889 A0A087WZG4 1122 aa28.26■■■□□ 2.11
FANCA-221ENST00000566889 CASP7P55210 303 aa28.26■■■□□ 2.11
FANCA-221ENST00000566889 LMBR1LQ6UX01 489 aa28.26■■■□□ 2.11
FANCA-221ENST00000566889 SAR1BQ9Y6B6 198 aa28.26■■■□□ 2.11
FANCA-221ENST00000566889 EIF3HO15372 352 aaKnown RBP eCLIP28.26■■■□□ 2.11
FANCA-221ENST00000566889 LTKP29376 864 aa28.26■■■□□ 2.11
FANCA-221ENST00000566889 WASHC4Q2M389 1173 aa28.26■■■□□ 2.11
FANCA-221ENST00000566889 RILPL1Q5EBL4 403 aa28.26■■■□□ 2.11
FANCA-221ENST00000566889 PAPD7Q5XG87 772 aaKnown RBP28.26■■■□□ 2.11
FANCA-221ENST00000566889 KCNV1Q6PIU1 500 aa28.26■■■□□ 2.11
FANCA-221ENST00000566889 BCAS4Q8TDM0 211 aa28.26■■■□□ 2.11
FANCA-221ENST00000566889 GOLGA6BA6NDN3 693 aa28.25■■■□□ 2.11
FANCA-221ENST00000566889 SH2B2O14492 632 aaPredicted RBP28.25■■■□□ 2.11
FANCA-221ENST00000566889 RIN2Q8WYP3 895 aaPredicted RBP28.25■■■□□ 2.11
FANCA-221ENST00000566889 WASF1Q92558 559 aa28.25■■■□□ 2.11
FANCA-221ENST00000566889 PHKBQ93100 1093 aa28.25■■■□□ 2.11
FANCA-221ENST00000566889 SELENOOQ9BVL4 669 aa28.25■■■□□ 2.11
FANCA-221ENST00000566889 SRPRBQ9Y5M8 271 aaKnown RBP28.25■■■□□ 2.11
FANCA-221ENST00000566889 GOLGA8KD6RF30 607 aa28.24■■■□□ 2.11
FANCA-221ENST00000566889 SAFBQ15424 915 aaKnown RBP eCLIP28.24■■■□□ 2.11
FANCA-221ENST00000566889 APOA5Q6Q788 366 aa28.24■■■□□ 2.11
FANCA-221ENST00000566889 CCNI2Q6ZMN8 369 aaPredicted RBP28.24■■■□□ 2.11
FANCA-221ENST00000566889 SPATS2Q86XZ4 545 aaKnown RBP28.24■■■□□ 2.11
FANCA-221ENST00000566889 GRAMD1CQ8IYS0 662 aa28.24■■■□□ 2.11
FANCA-221ENST00000566889 PRPF38AQ8NAV1 312 aaKnown RBP28.24■■■□□ 2.11
FANCA-221ENST00000566889 CEP131Q9UPN4 1083 aa28.24■■■□□ 2.11
FANCA-221ENST00000566889 PHRF1Q9P1Y6 1649 aaKnown RBP28.24■■■□□ 2.11
FANCA-221ENST00000566889 ADAMTS7Q9UKP4 1686 aa28.24■■■□□ 2.11
FANCA-221ENST00000566889 RGPD2P0DJD1 1756 aa28.24■■■□□ 2.11
FANCA-221ENST00000566889 ECM29Q5VYK3 1845 aa28.24■■■□□ 2.11
FANCA-221ENST00000566889 NTRK3Q16288 839 aa28.24■■■□□ 2.11
FANCA-221ENST00000566889 SKIDA1Q1XH10 827 aa28.23■■■□□ 2.11
FANCA-221ENST00000566889 APPBP2Q92624 585 aa28.23■■■□□ 2.11
FANCA-221ENST00000566889 MMS19Q96T76 1030 aa28.23■■■□□ 2.11
FANCA-221ENST00000566889 SLF1Q9BQI6 1058 aa28.23■■■□□ 2.11
FANCA-221ENST00000566889 B4GALNT4Q76KP1 1039 aa28.23■■■□□ 2.11
FANCA-221ENST00000566889 EHBP1Q8NDI1 1231 aa28.23■■■□□ 2.11
FANCA-221ENST00000566889 RUBCNQ92622 972 aa28.23■■■□□ 2.11
FANCA-221ENST00000566889 LIMA1Q9UHB6 759 aaKnown RBP28.23■■■□□ 2.11
FANCA-221ENST00000566889 UBN2Q6ZU65 1347 aa28.23■■■□□ 2.11
FANCA-221ENST00000566889 C5P01031 1676 aa28.23■■■□□ 2.11
FANCA-221ENST00000566889 MST1RQ04912 1400 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 LRRC10BA6NIK2 292 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 TOB1P50616 345 aaPredicted RBP28.22■■■□□ 2.11
FANCA-221ENST00000566889 IQCEQ6IPM2 695 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 ZNF790Q6PG37 636 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 C14orf37Q86TY3 774 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 LRRC59Q96AG4 307 aaKnown RBP28.22■■■□□ 2.11
FANCA-221ENST00000566889 TMEM87BQ96K49 555 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 NUP88Q99567 741 aaPredicted RBP28.22■■■□□ 2.11
FANCA-221ENST00000566889 NBPF3Q9H094 633 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms