RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 KIAA0232Q92628 1395 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 IBTKQ9P2D0 1353 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-214ENST00000565274 MPHOSPH10O00566 681 aaKnown RBP6.1□□□□□ -1.43
CAPN3-214ENST00000565274 NOS2P35228 1153 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 EIF5P55010 431 aaKnown RBP6.1□□□□□ -1.43
CAPN3-214ENST00000565274 TRIM28Q13263 835 aaKnown RBP6.1□□□□□ -1.43
CAPN3-214ENST00000565274 PLEKHG6Q3KR16 790 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 CT47A1Q5JQC4 288 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-214ENST00000565274 SH3PXD2AQ5TCZ1 1133 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 INTS3Q68E01 1043 aaKnown RBP6.1□□□□□ -1.43
CAPN3-214ENST00000565274 SDE2Q6IQ49 451 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 CHD1LQ86WJ1 897 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 NT5DC4Q86YG4 428 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 CCAR1Q8IX12 1150 aaKnown RBP6.1□□□□□ -1.43
CAPN3-214ENST00000565274 TNS4Q8IZW8 715 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 DEPDC4Q8N2C3 294 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 NLGN1Q8N2Q7 840 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 PDILTQ8N807 584 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 NEUROD6Q96NK8 337 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 LRRC27Q9C0I9 530 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 RETREG1Q9H6L5 497 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 SUDS3Q9H7L9 328 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-214ENST00000565274 SCHIP1Q9P0W5 487 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-214ENST00000565274 SUN2Q9UH99 717 aa6.1□□□□□ -1.43
CAPN3-214ENST00000565274 LRRC7Q96NW7 1537 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 KIF20BQ96Q89 1820 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 KNDC1Q76NI1 1749 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 KLHL33A6NCF5 533 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 CTAGE5O15320 804 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 TIMM44O43615 452 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 LETM1O95202 739 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-214ENST00000565274 ALBP02768 609 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 FAM163BP0C2L3 166 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 CCDC172P0C7W6 258 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 NAT2P11245 290 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 PRKAR2BP31323 418 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 PSMD2Q13200 908 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 GRIK4Q16099 956 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 SKOR2Q2VWA4 1001 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-214ENST00000565274 ZSCAN30Q86W11 494 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 ANKRD13BQ86YJ7 626 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 SLC9A9Q8IVB4 645 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 ITPRIPQ8IWB1 547 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 RHPN1Q8TCX5 695 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 GBP4Q96PP9 640 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 CDC5LQ99459 802 aaKnown RBP6.09□□□□□ -1.43
CAPN3-214ENST00000565274 BCL2L13Q9BXK5 485 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 USTQ9Y2C2 406 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 STARD13Q9Y3M8 1113 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 TBX22Q9Y458 520 aa6.09□□□□□ -1.43
CAPN3-214ENST00000565274 CFAP65Q6ZU64 1925 aaKnown RBP6.09□□□□□ -1.44
CAPN3-214ENST00000565274 CPS1P31327 1500 aa6.09□□□□□ -1.44
CAPN3-214ENST00000565274 USP31Q70CQ4 1352 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 SOS1Q07889 1333 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-214ENST00000565274 NRXN3Q9Y4C0 1643 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 IPO5O00410 1097 aaKnown RBP6.08□□□□□ -1.44
CAPN3-214ENST00000565274 CHL1O00533 1208 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 SIN3BO75182 1162 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 NEFHP12036 1026 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 SOX11P35716 441 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 TERF1P54274 439 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 TBC1D8BQ0IIM8 1120 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 CCDC173Q0VFZ6 552 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 NCOA4Q13772 614 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 RAB3GAP1Q15042 981 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 TEAD4Q15561 434 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 NKAPLQ5M9Q1 402 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 NUDT16Q96DE0 195 aaKnown RBP6.08□□□□□ -1.44
CAPN3-214ENST00000565274 IL17RAQ96F46 866 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 PHACTR3Q96KR7 559 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 GTPBP4Q9BZE4 634 aaKnown RBP6.08□□□□□ -1.44
CAPN3-214ENST00000565274 DCTPP1Q9H773 170 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 SFMBT1Q9UHJ3 866 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 AKAP2Q9Y2D5 859 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 HCN4Q9Y3Q4 1203 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 SSH2Q76I76 1423 aa6.08□□□□□ -1.44
CAPN3-214ENST00000565274 TSPOAP1O95153 1857 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 NRKQ7Z2Y5 1582 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 MYO5BQ9ULV0 1848 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 SERTM1A2A2V5 107 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 EML1O00423 815 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 PES1O00541 588 aaKnown RBP6.07□□□□□ -1.44
CAPN3-214ENST00000565274 DYRK3O43781 588 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 SKILP12757 684 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 CD53P19397 219 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 CASQ1P31415 396 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 MAN1A1P33908 653 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 ADH7P40394 386 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 HMGN5P82970 282 aaKnown RBP6.07□□□□□ -1.44
CAPN3-214ENST00000565274 SPEM2Q0P670 501 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 TRAPPC3LQ5T215 181 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 TTC30AQ86WT1 665 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 SIRT2Q8IXJ6 389 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 RPAP2Q8IXW5 612 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-214ENST00000565274 RPUSD2Q8IZ73 545 aaKnown RBP6.07□□□□□ -1.44
CAPN3-214ENST00000565274 MICALL1Q8N3F8 863 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 COG3Q96JB2 828 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 HSH2DQ96JZ2 352 aa6.07□□□□□ -1.44
CAPN3-214ENST00000565274 PPP1R9BQ96SB3 815 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms