RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 TCP10Q12799 353 aa18.28■□□□□ 0.52
SCAMP2-205ENST00000564529 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
SCAMP2-205ENST00000564529 MAPKAPK5Q8IW41 473 aa18.28■□□□□ 0.52
SCAMP2-205ENST00000564529 HOOK2Q96ED9 719 aa18.28■□□□□ 0.52
SCAMP2-205ENST00000564529 ARHGAP39Q9C0H5 1083 aa18.28■□□□□ 0.52
SCAMP2-205ENST00000564529 CSADQ9Y600 493 aa18.28■□□□□ 0.52
SCAMP2-205ENST00000564529 SLC4A4Q9Y6R1 1079 aa18.28■□□□□ 0.52
SCAMP2-205ENST00000564529 CCDC171Q6TFL3 1326 aa18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 CEP290O15078 2479 aa18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 SGSM2O43147 1006 aa18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 PICALMQ13492 652 aa18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 SBK1Q52WX2 424 aa18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 FOXP4Q8IVH2 680 aaPredicted RBP18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 SH3TC2Q8TF17 1288 aa18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 SDR42E1Q8WUS8 393 aa18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 PI4KBQ9UBF8 816 aa18.27■□□□□ 0.52
SCAMP2-205ENST00000564529 SPDYE5A6NIY4 337 aa18.26■□□□□ 0.51
SCAMP2-205ENST00000564529 H0YGN5 161 aa18.26■□□□□ 0.51
SCAMP2-205ENST00000564529 HSPD1P10809 573 aaKnown RBP18.26■□□□□ 0.51
SCAMP2-205ENST00000564529 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
SCAMP2-205ENST00000564529 IFNL3Q8IZI9 196 aa18.26■□□□□ 0.51
SCAMP2-205ENST00000564529 IL25Q9H293 177 aa18.26■□□□□ 0.51
SCAMP2-205ENST00000564529 BTBD19C9JJ37 291 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 TLR2O60603 784 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 CDC45O75419 566 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 LACTBP83111 547 aaPredicted RBP18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 TTC6Q86TZ1 520 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 DSCC1Q9BVC3 393 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 EHD4Q9H223 541 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 EPB41L4AQ9HCS5 686 aaPredicted RBP18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 ZNF112Q9UJU3 913 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 SNCAIPQ9Y6H5 919 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 FOCADQ5VW36 1801 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 AK9Q5TCS8 1911 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 TRIOBPQ9H2D6 2365 aa18.25■□□□□ 0.51
SCAMP2-205ENST00000564529 ZMYM6O95789 1325 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 CETPP11597 493 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 GABPAQ06546 454 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 C12orf60Q5U649 245 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 VPS53Q5VIR6 699 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 CTR9Q6PD62 1173 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 ZKSCAN4Q969J2 545 aaPredicted RBP18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 ESYT1Q9BSJ8 1104 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 NACAP1Q9BZK3 213 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 CDK5RAP2Q96SN8 1893 aa18.24■□□□□ 0.51
SCAMP2-205ENST00000564529 USP17L12C9JPN9 530 aa18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 USP17L21D6R901 530 aa18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 IRF6O14896 467 aa18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 KIF22Q14807 665 aa18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 DCAF15Q66K64 600 aa18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 ERO1BQ86YB8 467 aa18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 DDRGK1Q96HY6 314 aa18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 ZCCHC17Q9NP64 241 aaKnown RBP18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 ARPP21Q9UBL0 812 aaPredicted RBP18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 HERC5Q9UII4 1024 aaKnown RBP18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 ZSWIM8A7E2V4 1837 aa18.23■□□□□ 0.51
SCAMP2-205ENST00000564529 ECM2O94769 699 aaPredicted RBP18.22■□□□□ 0.51
SCAMP2-205ENST00000564529 FGAP02671 866 aa18.22■□□□□ 0.51
SCAMP2-205ENST00000564529 PLCD1P51178 756 aa18.22■□□□□ 0.51
SCAMP2-205ENST00000564529 SNAPC2Q13487 334 aa18.22■□□□□ 0.51
SCAMP2-205ENST00000564529 ZSCAN29Q8IWY8 852 aaPredicted RBP18.22■□□□□ 0.51
SCAMP2-205ENST00000564529 WRNIP1Q96S55 665 aa18.22■□□□□ 0.51
SCAMP2-205ENST00000564529 PHF20L1A8MW92 1017 aa18.21■□□□□ 0.51
SCAMP2-205ENST00000564529 GNRH1P01148 92 aa18.21■□□□□ 0.51
SCAMP2-205ENST00000564529 HLA-DOAP06340 250 aa18.21■□□□□ 0.51
SCAMP2-205ENST00000564529 CASC1Q6TDU7 716 aa18.21■□□□□ 0.51
SCAMP2-205ENST00000564529 SAP30BPQ9UHR5 308 aaKnown RBP18.21■□□□□ 0.51
SCAMP2-205ENST00000564529 ANAPC4Q9UJX5 808 aa18.21■□□□□ 0.51
SCAMP2-205ENST00000564529 SZT2Q5T011 3432 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 APPP05067 770 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 POLR3DP05423 398 aaPredicted RBP18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 CTGFP29279 349 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 PRMT2P55345 433 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 PPIL2Q13356 520 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 MTFR1Q15390 333 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 TATDN1Q6P1N9 297 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 C17orf99Q6UX52 265 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 MAP4K1Q92918 833 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 SHISA4Q96DD7 197 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 ZNF341Q9BYN7 854 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 DNAJC18Q9H819 358 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 SERPINB13Q9UIV8 391 aa18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
SCAMP2-205ENST00000564529 EPB41L2O43491 1005 aaKnown RBP18.19■□□□□ 0.5
SCAMP2-205ENST00000564529 FGRP09769 529 aa18.19■□□□□ 0.5
SCAMP2-205ENST00000564529 CHRDL2Q6WN34 429 aa18.19■□□□□ 0.5
SCAMP2-205ENST00000564529 MIGA2Q7L4E1 593 aa18.19■□□□□ 0.5
SCAMP2-205ENST00000564529 LSG1Q9H089 658 aaKnown RBP18.19■□□□□ 0.5
SCAMP2-205ENST00000564529 NAPBQ9H115 298 aa18.19■□□□□ 0.5
SCAMP2-205ENST00000564529 CPA4Q9UI42 421 aa18.19■□□□□ 0.5
SCAMP2-205ENST00000564529 ROBO3Q96MS0 1386 aa18.18■□□□□ 0.5
SCAMP2-205ENST00000564529 CYP2D6P10635 497 aa18.18■□□□□ 0.5
SCAMP2-205ENST00000564529 TDO2P48775 406 aa18.18■□□□□ 0.5
SCAMP2-205ENST00000564529 PTH1RQ03431 593 aa18.18■□□□□ 0.5
SCAMP2-205ENST00000564529 NOL9Q5SY16 702 aaKnown RBP18.18■□□□□ 0.5
SCAMP2-205ENST00000564529 C16orf86Q6ZW13 317 aa18.18■□□□□ 0.5
SCAMP2-205ENST00000564529 AMOTL1Q8IY63 956 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms