RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 OTUD7BQ6GQQ9 843 aa21.88■■□□□ 1.09
PKD1-227ENST00000564313 TATDN1Q6P1N9 297 aa21.88■■□□□ 1.09
PKD1-227ENST00000564313 SWAP70Q9UH65 585 aa21.88■■□□□ 1.09
PKD1-227ENST00000564313 TESPA1A2RU30 521 aaPredicted RBP21.87■■□□□ 1.09
PKD1-227ENST00000564313 GSG1L2A8MUP6 293 aa21.87■■□□□ 1.09
PKD1-227ENST00000564313 PATL2C9JE40 543 aaKnown RBP21.87■■□□□ 1.09
PKD1-227ENST00000564313 ASNSP08243 561 aa21.87■■□□□ 1.09
PKD1-227ENST00000564313 SLURP2P0DP57 97 aa21.87■■□□□ 1.09
PKD1-227ENST00000564313 SDSP20132 328 aa21.87■■□□□ 1.09
PKD1-227ENST00000564313 GABPAQ06546 454 aa21.87■■□□□ 1.09
PKD1-227ENST00000564313 SBK1Q52WX2 424 aa21.87■■□□□ 1.09
PKD1-227ENST00000564313 C12orf60Q5U649 245 aa21.87■■□□□ 1.09
PKD1-227ENST00000564313 SEC62Q99442 399 aaKnown RBP21.87■■□□□ 1.09
PKD1-227ENST00000564313 KCNH4Q9UQ05 1017 aa21.87■■□□□ 1.09
PKD1-227ENST00000564313 USP17L12C9JPN9 530 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 USP17L21D6R901 530 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 GPR25O00155 361 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 CXCL11O14625 94 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 IRF6O14896 467 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 APPP05067 770 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 CETPP11597 493 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 MS4A4AQ96JQ5 239 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 DIAPH3Q9NSV4 1193 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 PPP4R2Q9NY27 417 aa21.86■■□□□ 1.09
PKD1-227ENST00000564313 GSPT1P15170 499 aaKnown RBP21.85■■□□□ 1.09
PKD1-227ENST00000564313 TDO2P48775 406 aa21.85■■□□□ 1.09
PKD1-227ENST00000564313 NMIQ13287 307 aaPredicted RBP21.85■■□□□ 1.09
PKD1-227ENST00000564313 CTR9Q6PD62 1173 aa21.85■■□□□ 1.09
PKD1-227ENST00000564313 AS3MTQ9HBK9 375 aa21.85■■□□□ 1.09
PKD1-227ENST00000564313 ZHX2Q9Y6X8 837 aa21.85■■□□□ 1.09
PKD1-227ENST00000564313 CCL15-CCL14A0A0B4J2E2 113 aa21.84■■□□□ 1.09
PKD1-227ENST00000564313 A0A0D9SFI3 127 aa21.84■■□□□ 1.09
PKD1-227ENST00000564313 CCL15Q16663 113 aa21.84■■□□□ 1.09
PKD1-227ENST00000564313 CERKLQ49MI3 558 aaPredicted RBP21.84■■□□□ 1.09
PKD1-227ENST00000564313 IFNL1Q8IU54 200 aa21.84■■□□□ 1.09
PKD1-227ENST00000564313 IFNL3Q8IZI9 196 aa21.84■■□□□ 1.09
PKD1-227ENST00000564313 FAM227BQ96M60 508 aa21.84■■□□□ 1.09
PKD1-227ENST00000564313 PHIPQ8WWQ0 1821 aa21.83■■□□□ 1.09
PKD1-227ENST00000564313 MYH8P13535 1937 aa21.83■■□□□ 1.09
PKD1-227ENST00000564313 USP17L5A8MUK1 530 aa21.83■■□□□ 1.09
PKD1-227ENST00000564313 SHMT1P34896 483 aa21.83■■□□□ 1.09
PKD1-227ENST00000564313 NOM1Q5C9Z4 860 aaKnown RBP21.83■■□□□ 1.09
PKD1-227ENST00000564313 NAPBQ9H115 298 aa21.83■■□□□ 1.09
PKD1-227ENST00000564313 EPB41L4AQ9HCS5 686 aaPredicted RBP21.83■■□□□ 1.09
PKD1-227ENST00000564313 ZCCHC17Q9NP64 241 aaKnown RBP21.83■■□□□ 1.09
PKD1-227ENST00000564313 CABP5Q9NP86 173 aa21.83■■□□□ 1.09
PKD1-227ENST00000564313 ZBTB21Q9ULJ3 1066 aa21.83■■□□□ 1.09
PKD1-227ENST00000564313 AFG3L2Q9Y4W6 797 aa21.83■■□□□ 1.09
PKD1-227ENST00000564313 ROBO3Q96MS0 1386 aa21.83■■□□□ 1.08
PKD1-227ENST00000564313 CCDC171Q6TFL3 1326 aa21.82■■□□□ 1.08
PKD1-227ENST00000564313 IGF2BP3O00425 579 aaKnown RBP eCLIP21.82■■□□□ 1.08
PKD1-227ENST00000564313 CYP2D6P10635 497 aa21.82■■□□□ 1.08
PKD1-227ENST00000564313 FXR1P51114 621 aaKnown RBP eCLIP21.82■■□□□ 1.08
PKD1-227ENST00000564313 RRP1BQ14684 758 aaKnown RBP21.82■■□□□ 1.08
PKD1-227ENST00000564313 C16orf86Q6ZW13 317 aa21.82■■□□□ 1.08
PKD1-227ENST00000564313 PTPN18Q99952 460 aa21.82■■□□□ 1.08
PKD1-227ENST00000564313 CFHR5Q9BXR6 569 aa21.82■■□□□ 1.08
PKD1-227ENST00000564313 ZNF287Q9HBT7 754 aa21.82■■□□□ 1.08
PKD1-227ENST00000564313 HTTP42858 3142 aa21.81■■□□□ 1.08
PKD1-227ENST00000564313 GDF11O95390 407 aa21.81■■□□□ 1.08
PKD1-227ENST00000564313 ABCB5Q2M3G0 1257 aa21.81■■□□□ 1.08
PKD1-227ENST00000564313 CCDC129Q6ZRS4 1044 aa21.81■■□□□ 1.08
PKD1-227ENST00000564313 FASTKD5Q7L8L6 764 aaKnown RBP21.81■■□□□ 1.08
PKD1-227ENST00000564313 ZNF280CQ8ND82 737 aa21.81■■□□□ 1.08
PKD1-227ENST00000564313 BRI3BPQ8WY22 251 aa21.81■■□□□ 1.08
PKD1-227ENST00000564313 CCDC17Q96LX7 622 aa21.81■■□□□ 1.08
PKD1-227ENST00000564313 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
PKD1-227ENST00000564313 RAD50Q92878 1312 aa21.8■■□□□ 1.08
PKD1-227ENST00000564313 A0A0G2JLL6 359 aaPredicted RBP21.8■■□□□ 1.08
PKD1-227ENST00000564313 FKTNO75072 461 aa21.8■■□□□ 1.08
PKD1-227ENST00000564313 SLC3A2P08195 630 aaKnown RBP21.8■■□□□ 1.08
PKD1-227ENST00000564313 CDK8P49336 464 aa21.8■■□□□ 1.08
PKD1-227ENST00000564313 CWC27Q6UX04 472 aaKnown RBP21.8■■□□□ 1.08
PKD1-227ENST00000564313 PRRT2Q7Z6L0 340 aaPredicted RBP21.8■■□□□ 1.08
PKD1-227ENST00000564313 RUFY2Q8WXA3 655 aa21.8■■□□□ 1.08
PKD1-227ENST00000564313 WDR18Q9BV38 432 aa21.8■■□□□ 1.08
PKD1-227ENST00000564313 R3HDMLQ9H3Y0 253 aa21.8■■□□□ 1.08
PKD1-227ENST00000564313 CENPFP49454 3210 aa21.79■■□□□ 1.08
PKD1-227ENST00000564313 PTPRFP10586 1907 aa21.79■■□□□ 1.08
PKD1-227ENST00000564313 CYP2D7A0A087X1C5 515 aa21.79■■□□□ 1.08
PKD1-227ENST00000564313 POTEFA5A3E0 1075 aa21.79■■□□□ 1.08
PKD1-227ENST00000564313 MINDY4BA8MYZ0 360 aa21.79■■□□□ 1.08
PKD1-227ENST00000564313 GH2P01242 217 aa21.79■■□□□ 1.08
PKD1-227ENST00000564313 ALX1Q15699 326 aa21.79■■□□□ 1.08
PKD1-227ENST00000564313 DYNLL2Q96FJ2 89 aa21.79■■□□□ 1.08
PKD1-227ENST00000564313 TRIM75PA6NK02 468 aa21.78■■□□□ 1.08
PKD1-227ENST00000564313 ANKRD23Q86SG2 305 aa21.78■■□□□ 1.08
PKD1-227ENST00000564313 ZNF589Q86UQ0 364 aaPredicted RBP21.78■■□□□ 1.08
PKD1-227ENST00000564313 BRCA2P51587 3418 aa21.78■■□□□ 1.08
PKD1-227ENST00000564313 C19orf81C9J6K1 198 aa21.77■■□□□ 1.08
PKD1-227ENST00000564313 HSPD1P10809 573 aaKnown RBP21.77■■□□□ 1.08
PKD1-227ENST00000564313 EVX2Q03828 476 aa21.77■■□□□ 1.08
PKD1-227ENST00000564313 SPP2Q13103 211 aa21.77■■□□□ 1.08
PKD1-227ENST00000564313 BMP2KLQ5H9B9 411 aa21.77■■□□□ 1.08
PKD1-227ENST00000564313 TMEM179Q6ZVK1 233 aa21.77■■□□□ 1.08
PKD1-227ENST00000564313 PROCA1Q8NCQ7 364 aaPredicted RBP21.77■■□□□ 1.08
PKD1-227ENST00000564313 SLC44A5Q8NCS7 719 aa21.77■■□□□ 1.08
PKD1-227ENST00000564313 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.77■■□□□ 1.08
PKD1-227ENST00000564313 BTBD19C9JJ37 291 aa21.76■■□□□ 1.07
PKD1-227ENST00000564313 MPHOSPH10O00566 681 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms