RNA–Protein interactions for RNA: ENST00000563678.1

CLUHP3-207, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

BASIC

Gene CLUHP3, Length 1,303 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-207ENST00000563678 RAB11FIP3O75154 756 aa13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 IFIT1P09914 478 aaKnown RBP13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 RFX5P48382 616 aaPredicted RBP13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 LRRC24Q50LG9 513 aa13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 CCDC84Q86UT8 332 aaPredicted RBP13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 CHD1LQ86WJ1 897 aa13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 ZSCAN29Q8IWY8 852 aaPredicted RBP13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 IDI2Q9BXS1 227 aa13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 COPRSQ9NQ92 184 aa13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.79□□□□□ -0.2
CLUHP3-207ENST00000563678 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 TMEM265A0A087WTH1 108 aa13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 PRDX5P30044 214 aa13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 CCND3P30281 292 aaPredicted RBP13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 SHHQ15465 462 aa13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 SH3BP5LQ7L8J4 393 aa13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 SENP6Q9GZR1 1112 aaPredicted RBP13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 EXOC6BQ9Y2D4 811 aa13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 RFX7Q2KHR2 1363 aa13.78□□□□□ -0.2
CLUHP3-207ENST00000563678 LDHBP07195 334 aaKnown RBP13.77□□□□□ -0.21
CLUHP3-207ENST00000563678 SPP2Q13103 211 aa13.77□□□□□ -0.21
CLUHP3-207ENST00000563678 PUM3Q15397 648 aaKnown RBP13.77□□□□□ -0.21
CLUHP3-207ENST00000563678 C9orf50Q5SZB4 431 aa13.77□□□□□ -0.21
CLUHP3-207ENST00000563678 ERC1Q8IUD2 1116 aa13.77□□□□□ -0.21
CLUHP3-207ENST00000563678 DDTLA6NHG4 134 aaPredicted RBP13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 FGFR2P21802 821 aa13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 HMGCS2P54868 508 aa13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 KIF1BPQ96EK5 621 aa13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 TBC1D2Q9BYX2 928 aa13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 LRRCC1Q9C099 1032 aa13.76□□□□□ -0.21
CLUHP3-207ENST00000563678 FRMPD3Q5JV73 1810 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 MYO9BQ13459 2157 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 SLURP2P0DP57 97 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 PDE4AP27815 886 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 MAPK4P31152 587 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 RGS2P41220 211 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 RTP1P59025 263 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 USP38Q8NB14 1042 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 USP6NLQ92738 828 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 APBA2Q99767 749 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 LNPKQ9C0E8 428 aa13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 PA2G4Q9UQ80 394 aaKnown RBP13.75□□□□□ -0.21
CLUHP3-207ENST00000563678 TBC1D12O60347 775 aa13.74□□□□□ -0.21
CLUHP3-207ENST00000563678 CIAO1O76071 339 aa13.74□□□□□ -0.21
CLUHP3-207ENST00000563678 SLC5A1P13866 664 aa13.74□□□□□ -0.21
CLUHP3-207ENST00000563678 IRX3P78415 501 aaPredicted RBP13.74□□□□□ -0.21
CLUHP3-207ENST00000563678 SH3D19Q5HYK7 790 aa13.74□□□□□ -0.21
CLUHP3-207ENST00000563678 GPRC5AQ8NFJ5 357 aa13.74□□□□□ -0.21
CLUHP3-207ENST00000563678 OSBPL5Q9H0X9 879 aaPredicted RBP13.74□□□□□ -0.21
CLUHP3-207ENST00000563678 GAKO14976 1311 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 SALL3Q9BXA9 1300 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 SALL1Q9NSC2 1324 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 MAP3K12Q12852 859 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 OS9Q13438 667 aaPredicted RBP13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 CCL14Q16627 93 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 MORN1Q5T089 497 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 RHPN1Q8TCX5 695 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 TXNRD2Q9NNW7 524 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 DDX4Q9NQI0 724 aaKnown RBP13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 MYH2Q9UKX2 1941 aa13.73□□□□□ -0.21
CLUHP3-207ENST00000563678 DNM1LO00429 736 aa13.72□□□□□ -0.21
CLUHP3-207ENST00000563678 MSCO60682 206 aa13.72□□□□□ -0.21
CLUHP3-207ENST00000563678 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLUHP3-207ENST00000563678 KLHDC4Q8TBB5 520 aa13.72□□□□□ -0.21
CLUHP3-207ENST00000563678 LPIN2Q92539 896 aa13.72□□□□□ -0.21
CLUHP3-207ENST00000563678 LPAR1Q92633 364 aa13.72□□□□□ -0.21
CLUHP3-207ENST00000563678 GNL3LQ9NVN8 582 aaKnown RBP13.72□□□□□ -0.21
CLUHP3-207ENST00000563678 ATP11BQ9Y2G3 1177 aa13.72□□□□□ -0.21
CLUHP3-207ENST00000563678 USP17L5A8MUK1 530 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 EYA2O00167 538 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 HOXA7P31268 230 aaPredicted RBP13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 HERVK_113P62684 666 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 PICALMQ13492 652 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 MFSD14CQ5VZR4 134 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 GPR142Q7Z601 462 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 CCAR1Q8IX12 1150 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 ATXN2LQ8WWM7 1075 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 BADQ92934 168 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 P2RX7Q99572 595 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 SIL1Q9H173 461 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.71□□□□□ -0.214e-6■■□□□ 13.9
CLUHP3-207ENST00000563678 AS3MTQ9HBK9 375 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 DDX20Q9UHI6 824 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-207ENST00000563678 RLFQ13129 1914 aa13.7□□□□□ -0.22
CLUHP3-207ENST00000563678 FAM196BA6NMK8 535 aa13.7□□□□□ -0.22
CLUHP3-207ENST00000563678 APBB1O00213 710 aa13.7□□□□□ -0.22
CLUHP3-207ENST00000563678 SMARCA5O60264 1052 aaPredicted RBP13.7□□□□□ -0.22
CLUHP3-207ENST00000563678 PEX10O60683 326 aa13.7□□□□□ -0.22
CLUHP3-207ENST00000563678 IL15P40933 162 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms