RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 SPATA31A6Q5VVP1 1343 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 NPHP3Q7Z494 1330 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 POLR3AO14802 1390 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-205ENST00000563283 ITSN1Q15811 1721 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 ABCA3Q99758 1704 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 SSH2Q76I76 1423 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 CD163L1Q9NR16 1453 aa7.17□□□□□ -1.26
CNOT1-205ENST00000563283 FSTP19883 344 aa7.17□□□□□ -1.26
CNOT1-205ENST00000563283 ARTNQ5T4W7 220 aa7.17□□□□□ -1.26
CNOT1-205ENST00000563283 RNF208Q9H0X6 261 aa7.17□□□□□ -1.26
CNOT1-205ENST00000563283 MARF1Q9Y4F3 1742 aaKnown RBP7.17□□□□□ -1.26
CNOT1-205ENST00000563283 ACEP12821 1306 aa7.17□□□□□ -1.26
CNOT1-205ENST00000563283 SBNO2Q9Y2G9 1366 aa7.17□□□□□ -1.26
CNOT1-205ENST00000563283 A0A1W2PP55 124 aa7.16□□□□□ -1.26
CNOT1-205ENST00000563283 DHX15O43143 795 aaKnown RBP7.16□□□□□ -1.26
CNOT1-205ENST00000563283 ESRRAP11474 423 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-205ENST00000563283 LRP8Q14114 963 aa7.16□□□□□ -1.26
CNOT1-205ENST00000563283 ANKRD34AQ69YU3 496 aa7.16□□□□□ -1.26
CNOT1-205ENST00000563283 CCNJLQ8IV13 435 aa7.16□□□□□ -1.26
CNOT1-205ENST00000563283 UTP4Q969X6 686 aaKnown RBP7.16□□□□□ -1.26
CNOT1-205ENST00000563283 RUSC1Q9BVN2 902 aa7.16□□□□□ -1.26
CNOT1-205ENST00000563283 RNF112Q9ULX5 631 aa7.16□□□□□ -1.26
CNOT1-205ENST00000563283 SBNO1A3KN83 1393 aa7.16□□□□□ -1.26
CNOT1-205ENST00000563283 PPIP5K1Q6PFW1 1433 aa7.16□□□□□ -1.26
CNOT1-205ENST00000563283 AKAP12Q02952 1782 aa7.15□□□□□ -1.26
CNOT1-205ENST00000563283 METTL12A8MUP2 240 aa7.15□□□□□ -1.26
CNOT1-205ENST00000563283 IGHA2P01877 340 aa7.15□□□□□ -1.26
CNOT1-205ENST00000563283 USPL1Q5W0Q7 1092 aa7.15□□□□□ -1.26
CNOT1-205ENST00000563283 MYRFLQ96LU7 910 aa7.15□□□□□ -1.26
CNOT1-205ENST00000563283 TCF12Q99081 682 aa7.15□□□□□ -1.26
CNOT1-205ENST00000563283 LIN7BQ9HAP6 207 aa7.15□□□□□ -1.26
CNOT1-205ENST00000563283 ZFP64Q9NPA5 681 aa7.15□□□□□ -1.26
CNOT1-205ENST00000563283 EIF3AQ14152 1382 aaKnown RBP7.15□□□□□ -1.26
CNOT1-205ENST00000563283 CPSF1Q10570 1443 aaKnown RBP7.15□□□□□ -1.27
CNOT1-205ENST00000563283 TNS3Q68CZ2 1445 aa7.15□□□□□ -1.27
CNOT1-205ENST00000563283 MEGF11A6BM72 1044 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 SOWAHDA6NJG2 315 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 GPR182O15218 404 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 GSC2O15499 205 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 CPNE3O75131 537 aaKnown RBP7.14□□□□□ -1.27
CNOT1-205ENST00000563283 ORC1Q13415 861 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 KIAA0319Q5VV43 1072 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.14□□□□□ -1.27
CNOT1-205ENST00000563283 NRKQ7Z2Y5 1582 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 EVC2Q86UK5 1308 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 NGDNQ8NEJ9 315 aaKnown RBP7.14□□□□□ -1.27
CNOT1-205ENST00000563283 USP47Q96K76 1375 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 SLC12A5Q9H2X9 1139 aa7.14□□□□□ -1.27
CNOT1-205ENST00000563283 GNEQ9Y223 722 aaKnown RBP7.14□□□□□ -1.27
CNOT1-205ENST00000563283 PIK3C2AO00443 1686 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 PHRF1Q9P1Y6 1649 aaKnown RBP7.13□□□□□ -1.27
CNOT1-205ENST00000563283 BCL9LQ86UU0 1499 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 A0A096LPE4 126 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 A0A1W2PPZ6 126 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 FAM83GA6ND36 823 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 EIF4EBP3O60516 100 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-205ENST00000563283 GRIA4P48058 902 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 PREPP48147 710 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 RBCK1Q9BYM8 510 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 DNAJC25Q9H1X3 360 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 CLEC4MQ9H2X3 399 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-205ENST00000563283 STOML1Q9UBI4 398 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 MON2Q7Z3U7 1717 aa7.13□□□□□ -1.27
CNOT1-205ENST00000563283 USP6P35125 1406 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 AFF2P51816 1311 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 LOC100289279A0A1B0GTE1 492 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 SART1O43290 800 aaKnown RBP7.12□□□□□ -1.27
CNOT1-205ENST00000563283 BRD1O95696 1058 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 IGLV1-40P01703 118 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 PCDH1Q08174 1060 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 NUTM2GQ5VZR2 741 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 FDX2Q6P4F2 183 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 FAM20CQ8IXL6 584 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 ALKBH8Q96BT7 664 aaKnown RBP7.12□□□□□ -1.27
CNOT1-205ENST00000563283 DMRTB1Q96MA1 342 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 C8orf37Q96NL8 207 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 USP26Q9BXU7 913 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 TMPRSS13Q9BYE2 586 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 NRSN2Q9GZP1 204 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 C7orf69Q9H7B7 122 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 NPHS2Q9NP85 383 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 HIF3AQ9Y2N7 669 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 MYOM1P52179 1685 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 EP400Q96L91 3159 aa7.12□□□□□ -1.27
CNOT1-205ENST00000563283 SLIT2O94813 1529 aa7.11□□□□□ -1.27
CNOT1-205ENST00000563283 EIF1AYO14602 144 aaKnown RBP7.11□□□□□ -1.27
CNOT1-205ENST00000563283 HYAL3O43820 417 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-205ENST00000563283 HSPA5P11021 654 aaKnown RBP7.11□□□□□ -1.27
CNOT1-205ENST00000563283 SPRED3Q2MJR0 410 aa7.11□□□□□ -1.27
CNOT1-205ENST00000563283 SMG8Q8ND04 991 aaKnown RBP7.11□□□□□ -1.27
CNOT1-205ENST00000563283 PUS7Q96PZ0 661 aaKnown RBP7.11□□□□□ -1.27
CNOT1-205ENST00000563283 SUGCTQ9HAC7 445 aa7.11□□□□□ -1.27
CNOT1-205ENST00000563283 PLCH1Q4KWH8 1693 aa7.11□□□□□ -1.27
CNOT1-205ENST00000563283 NRAPQ86VF7 1730 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 ARHGEF10O15013 1369 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 USP19O94966 1318 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 TTC21BQ7Z4L5 1316 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 BTBD11A6QL63 1104 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 ITPKAP23677 461 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms