RNA–Protein interactions for RNA: ENST00000561140.1

AC013489.1-201, humanhuman

TSL 3 BASIC

Gene AC013489.1, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013489.1-201ENST00000561140 NBPF3Q9H094 633 aa9.34□□□□□ -0.91
AC013489.1-201ENST00000561140 SLURP2P0DP57 97 aa9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 TRIM27P14373 513 aa9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 MAPK4P31152 587 aa9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 TTC39AQ5SRH9 613 aa9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 SSH3Q8TE77 659 aa9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 SH3RF3Q8TEJ3 882 aaPredicted RBP9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 SOCS4Q8WXH5 440 aa9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 P2RX7Q99572 595 aaKnown RBP9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 TRIM34Q9BYJ4 488 aa9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 TSHZ2Q9NRE2 1034 aa9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 OGDHLQ9ULD0 1010 aa9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 NOP58Q9Y2X3 529 aaKnown RBP9.33□□□□□ -0.92
AC013489.1-201ENST00000561140 PNMA6EA0A0J9YXQ4 647 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 FAM196BA6NMK8 535 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 GLRX3O76003 335 aaKnown RBP9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 HLA-DOAP06340 250 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 HERVK_113P62684 666 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 PDE3AQ14432 1141 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 RRP1BQ14684 758 aaKnown RBP9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 TNNI3KQ59H18 835 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 MAP3K21Q5TCX8 1036 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L2Q6R6M4 530 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 PI16Q6UXB8 463 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 CCDC84Q86UT8 332 aaPredicted RBP9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 CCAR1Q8IX12 1150 aaKnown RBP9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 CRACR2BQ8N4Y2 399 aaPredicted RBP9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 TGFBRAP1Q8WUH2 860 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 GDF15Q99988 308 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 FPGT-TNNI3KV9GXZ4 949 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 MYH2Q9UKX2 1941 aa9.32□□□□□ -0.92
AC013489.1-201ENST00000561140 SZT2Q5T011 3432 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 CYP2E1P05181 493 aaPredicted RBP9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 USP14P54578 494 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 CCNA1P78396 465 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 OS9Q13438 667 aaPredicted RBP9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 MTMR2Q13614 643 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 ZKSCAN2Q63HK3 967 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 USP6NLQ92738 828 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 FRAT1Q92837 279 aaPredicted RBP9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 C11orf49Q9H6J7 331 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 AATFQ9NY61 560 aaKnown RBP eCLIP9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 RBPJLQ9UBG7 517 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 STAP2Q9UGK3 403 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 RABGAP1Q9Y3P9 1069 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 DOCK3Q8IZD9 2030 aa9.31□□□□□ -0.92
AC013489.1-201ENST00000561140 A0A0C4DFX4 3053 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L15C9J2P7 530 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L13C9JLJ4 530 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L11C9JVI0 530 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L18D6R9N7 530 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L22D6RA61 530 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L17D6RBQ6 530 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L19D6RCP7 530 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L20D6RJB6 530 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 SURF6O75683 361 aaKnown RBP9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 RGS2P41220 211 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 ERVK-24P63145 666 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 USP17L24Q0WX57 530 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 LRIT3Q3SXY7 679 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 TATDN1Q6P1N9 297 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 PLEKHH3Q7Z736 793 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 TTC6Q86TZ1 520 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 MAPKAPK5Q8IW41 473 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 C12orf42Q96LP6 360 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 DBNDD2Q9BQY9 259 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 EHD4Q9H223 541 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 PALD1Q9ULE6 856 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 ZBTB21Q9ULJ3 1066 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 CIZ1Q9ULV3 898 aaPredicted RBP9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 SSUH2Q9Y2M2 353 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 FLT1P17948 1338 aa9.3□□□□□ -0.92
AC013489.1-201ENST00000561140 BCAR3O75815 825 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 ZKSCAN1P17029 563 aaPredicted RBP9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 CYP2B6P20813 491 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 CYP7A1P22680 504 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 ZAP70P43403 619 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 MNX1P50219 401 aaPredicted RBP9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 MAP3K12Q12852 859 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 Q3C1V9 767 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 MORN1Q5T089 497 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 LBX2Q6XYB7 198 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 TMEM57Q8N5G2 664 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 TRIB2Q92519 343 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 EDC3Q96F86 508 aaKnown RBP9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 DNAJC18Q9H819 358 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 TXNRD2Q9NNW7 524 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 EMILIN3Q9NT22 766 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 MYH13Q9UKX3 1938 aa9.29□□□□□ -0.92
AC013489.1-201ENST00000561140 SLC15A5A6NIM6 579 aa9.28□□□□□ -0.92
AC013489.1-201ENST00000561140 MSCO60682 206 aa9.28□□□□□ -0.92
AC013489.1-201ENST00000561140 HOXC6P09630 235 aa9.28□□□□□ -0.92
AC013489.1-201ENST00000561140 COL6A1P12109 1028 aa9.28□□□□□ -0.92
AC013489.1-201ENST00000561140 JAG1P78504 1218 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms