RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 TXNRD2Q9NNW7 524 aa21.98■■□□□ 1.11
TSPAN3-208ENST00000560514 PRKAG2Q9UGJ0 569 aa21.98■■□□□ 1.11
TSPAN3-208ENST00000560514 USP17L10C9JJH3 530 aa21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 ERVK-9P63128 1117 aa21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 ERVK-24P63145 666 aa21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 ZNF697Q5TEC3 545 aa21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 GPR142Q7Z601 462 aa21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 PLEKHH3Q7Z736 793 aa21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 CRACR2BQ8N4Y2 399 aaPredicted RBP21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 SPATA5Q8NB90 893 aa21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 APBA2Q99767 749 aa21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 LRP2BPQ9P2M1 347 aa21.97■■□□□ 1.11
TSPAN3-208ENST00000560514 POTEB2H3BUK9 544 aa21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 PEX10O60683 326 aa21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 GLRX3O76003 335 aaKnown RBP21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 TFCP2Q12800 502 aa21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 LHX8Q68G74 356 aa21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 TBC1D9Q6ZT07 1266 aa21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 ZNF384Q8TF68 577 aa21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 SENP6Q9GZR1 1112 aaPredicted RBP21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 HMG20BQ9P0W2 317 aa21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
TSPAN3-208ENST00000560514 BAG3O95817 575 aa21.95■■□□□ 1.1
TSPAN3-208ENST00000560514 CCL14Q16627 93 aa21.95■■□□□ 1.1
TSPAN3-208ENST00000560514 MFSD14CQ5VZR4 134 aa21.95■■□□□ 1.1
TSPAN3-208ENST00000560514 GUCD1Q96NT3 240 aa21.95■■□□□ 1.1
TSPAN3-208ENST00000560514 RBPJLQ9UBG7 517 aa21.95■■□□□ 1.1
TSPAN3-208ENST00000560514 PLCG2P16885 1265 aa21.94■■□□□ 1.1
TSPAN3-208ENST00000560514 CCNA1P78396 465 aa21.94■■□□□ 1.1
TSPAN3-208ENST00000560514 SH3RF3Q8TEJ3 882 aaPredicted RBP21.94■■□□□ 1.1
TSPAN3-208ENST00000560514 PORCNQ9H237 461 aa21.94■■□□□ 1.1
TSPAN3-208ENST00000560514 GINM1Q9NU53 330 aa21.94■■□□□ 1.1
TSPAN3-208ENST00000560514 Q3C1V9 767 aa21.93■■□□□ 1.1
TSPAN3-208ENST00000560514 MORN1Q5T089 497 aa21.93■■□□□ 1.1
TSPAN3-208ENST00000560514 WDR78Q5VTH9 848 aa21.93■■□□□ 1.1
TSPAN3-208ENST00000560514 FOXP4Q8IVH2 680 aaPredicted RBP21.93■■□□□ 1.1
TSPAN3-208ENST00000560514 USP6NLQ92738 828 aa21.93■■□□□ 1.1
TSPAN3-208ENST00000560514 EDC3Q96F86 508 aaKnown RBP21.93■■□□□ 1.1
TSPAN3-208ENST00000560514 FRMPD3Q5JV73 1810 aa21.92■■□□□ 1.1
TSPAN3-208ENST00000560514 SRGAP3O43295 1099 aa21.92■■□□□ 1.1
TSPAN3-208ENST00000560514 MSCO60682 206 aa21.92■■□□□ 1.1
TSPAN3-208ENST00000560514 CNGA1P29973 690 aa21.92■■□□□ 1.1
TSPAN3-208ENST00000560514 MAP2K5Q13163 448 aa21.92■■□□□ 1.1
TSPAN3-208ENST00000560514 USP17L2Q6R6M4 530 aa21.92■■□□□ 1.1
TSPAN3-208ENST00000560514 PI16Q6UXB8 463 aa21.92■■□□□ 1.1
TSPAN3-208ENST00000560514 API5Q9BZZ5 524 aaKnown RBP21.92■■□□□ 1.1
TSPAN3-208ENST00000560514 AATFQ9NY61 560 aaKnown RBP eCLIP21.92■■□□□ 1.1
TSPAN3-208ENST00000560514 GDF11O95390 407 aa21.91■■□□□ 1.1
TSPAN3-208ENST00000560514 ATN1P54259 1190 aaPredicted RBP21.91■■□□□ 1.1
TSPAN3-208ENST00000560514 NAA16Q6N069 864 aaPredicted RBP21.91■■□□□ 1.1
TSPAN3-208ENST00000560514 ATF7IPQ6VMQ6 1270 aa21.91■■□□□ 1.1
TSPAN3-208ENST00000560514 MAPKAPK5Q8IW41 473 aa21.91■■□□□ 1.1
TSPAN3-208ENST00000560514 TGFBRAP1Q8WUH2 860 aa21.91■■□□□ 1.1
TSPAN3-208ENST00000560514 UQCRFS1P1P0C7P4 283 aa21.9■■□□□ 1.1
TSPAN3-208ENST00000560514 MEIS3Q99687 375 aa21.9■■□□□ 1.1
TSPAN3-208ENST00000560514 DDX20Q9UHI6 824 aaKnown RBP21.9■■□□□ 1.1
TSPAN3-208ENST00000560514 ZBTB21Q9ULJ3 1066 aa21.9■■□□□ 1.1
TSPAN3-208ENST00000560514 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
TSPAN3-208ENST00000560514 IVNS1ABPQ9Y6Y0 642 aa21.9■■□□□ 1.1
TSPAN3-208ENST00000560514 MAST2Q6P0Q8 1798 aa21.89■■□□□ 1.1
TSPAN3-208ENST00000560514 HLA-DOAP06340 250 aa21.89■■□□□ 1.09
TSPAN3-208ENST00000560514 ARID4AP29374 1257 aaPredicted RBP21.89■■□□□ 1.09
TSPAN3-208ENST00000560514 ATP2B2Q01814 1243 aa21.89■■□□□ 1.09
TSPAN3-208ENST00000560514 LPAR1Q92633 364 aa21.89■■□□□ 1.09
TSPAN3-208ENST00000560514 FEZ1Q99689 392 aa21.89■■□□□ 1.09
TSPAN3-208ENST00000560514 RABGAP1Q9Y3P9 1069 aa21.89■■□□□ 1.09
TSPAN3-208ENST00000560514 SIPA1L1O43166 1804 aa21.89■■□□□ 1.09
TSPAN3-208ENST00000560514 GNAI3P08754 354 aa21.88■■□□□ 1.09
TSPAN3-208ENST00000560514 PALD1Q9ULE6 856 aa21.88■■□□□ 1.09
TSPAN3-208ENST00000560514 NDUFB9Q9Y6M9 179 aa21.88■■□□□ 1.09
TSPAN3-208ENST00000560514 FLT1P17948 1338 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 SLC15A5A6NIM6 579 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 USP17L15C9J2P7 530 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 USP17L13C9JLJ4 530 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 USP17L11C9JVI0 530 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 USP17L18D6R9N7 530 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 USP17L22D6RA61 530 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 USP17L17D6RBQ6 530 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 USP17L19D6RCP7 530 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 USP17L20D6RJB6 530 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 DNM1LO00429 736 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 MCAMP43121 646 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 JAG1P78504 1218 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 SLFN5Q08AF3 891 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 USP17L24Q0WX57 530 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 MAFAQ8NHW3 353 aaPredicted RBP21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 DNAJC18Q9H819 358 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 EMILIN3Q9NT22 766 aa21.87■■□□□ 1.09
TSPAN3-208ENST00000560514 RTP1P59025 263 aa21.86■■□□□ 1.09
TSPAN3-208ENST00000560514 G3BP1Q13283 466 aaKnown RBP eCLIP21.86■■□□□ 1.09
TSPAN3-208ENST00000560514 ZYXQ15942 572 aaKnown RBP21.86■■□□□ 1.09
TSPAN3-208ENST00000560514 METTL16Q86W50 562 aaKnown RBP21.86■■□□□ 1.09
TSPAN3-208ENST00000560514 CDX2Q99626 313 aaPredicted RBP21.86■■□□□ 1.09
TSPAN3-208ENST00000560514 ATP11BQ9Y2G3 1177 aa21.86■■□□□ 1.09
TSPAN3-208ENST00000560514 DNAH12Q6ZR08 3092 aa21.86■■□□□ 1.09
TSPAN3-208ENST00000560514 LAMA2P24043 3122 aaKnown RBP21.86■■□□□ 1.09
TSPAN3-208ENST00000560514 CDK5RAP2Q96SN8 1893 aa21.86■■□□□ 1.09
TSPAN3-208ENST00000560514 PTPREP23469 700 aa21.85■■□□□ 1.09
TSPAN3-208ENST00000560514 USP14P54578 494 aa21.85■■□□□ 1.09
TSPAN3-208ENST00000560514 PPP4CP60510 307 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms