RNA–Protein interactions for RNA: ENST00000559888.1

AP3B2-212, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-212ENST00000559888 RPTORQ8N122 1335 aa18.58■□□□□ 0.57
AP3B2-212ENST00000559888 USP17L10C9JJH3 530 aa18.58■□□□□ 0.56
AP3B2-212ENST00000559888 C1orf115Q9H7X2 142 aa18.58■□□□□ 0.56
AP3B2-212ENST00000559888 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.56
AP3B2-212ENST00000559888 GINM1Q9NU53 330 aa18.58■□□□□ 0.56
AP3B2-212ENST00000559888 NOP58Q9Y2X3 529 aaKnown RBP18.58■□□□□ 0.56
AP3B2-212ENST00000559888 GDF11O95390 407 aa18.57■□□□□ 0.56
AP3B2-212ENST00000559888 CYP7A1P22680 504 aa18.57■□□□□ 0.56
AP3B2-212ENST00000559888 TRIM32Q13049 653 aa18.57■□□□□ 0.56
AP3B2-212ENST00000559888 SHROOM1Q2M3G4 852 aaPredicted RBP18.57■□□□□ 0.56
AP3B2-212ENST00000559888 NECAB2Q7Z6G3 386 aa18.57■□□□□ 0.56
AP3B2-212ENST00000559888 GPRC5AQ8NFJ5 357 aa18.57■□□□□ 0.56
AP3B2-212ENST00000559888 CCDC8Q9H0W5 538 aaPredicted RBP18.57■□□□□ 0.56
AP3B2-212ENST00000559888 HMX1Q9NP08 348 aaPredicted RBP18.57■□□□□ 0.56
AP3B2-212ENST00000559888 SAP30BPQ9UHR5 308 aaKnown RBP18.57■□□□□ 0.56
AP3B2-212ENST00000559888 DBNLQ9UJU6 430 aaKnown RBP18.57■□□□□ 0.56
AP3B2-212ENST00000559888 SIPA1L1O43166 1804 aa18.57■□□□□ 0.56
AP3B2-212ENST00000559888 PEX10O60683 326 aa18.56■□□□□ 0.56
AP3B2-212ENST00000559888 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
AP3B2-212ENST00000559888 DYNLL1P63167 89 aaKnown RBP18.56■□□□□ 0.56
AP3B2-212ENST00000559888 DIS3LQ8TF46 1054 aaKnown RBP18.56■□□□□ 0.56
AP3B2-212ENST00000559888 EAF2Q96CJ1 260 aaPredicted RBP18.56■□□□□ 0.56
AP3B2-212ENST00000559888 TXNRD2Q9NNW7 524 aa18.56■□□□□ 0.56
AP3B2-212ENST00000559888 MYO5AQ9Y4I1 1855 aaKnown RBP18.55■□□□□ 0.56
AP3B2-212ENST00000559888 CYP2B6P20813 491 aa18.55■□□□□ 0.56
AP3B2-212ENST00000559888 HERVK_113P62684 666 aa18.55■□□□□ 0.56
AP3B2-212ENST00000559888 FTSJ3Q8IY81 847 aaKnown RBP18.55■□□□□ 0.56
AP3B2-212ENST00000559888 ANKLE1Q8NAG6 615 aa18.55■□□□□ 0.56
AP3B2-212ENST00000559888 TLR7Q9NYK1 1049 aaKnown RBP18.55■□□□□ 0.56
AP3B2-212ENST00000559888 RBPJLQ9UBG7 517 aa18.55■□□□□ 0.56
AP3B2-212ENST00000559888 ZBTB21Q9ULJ3 1066 aa18.55■□□□□ 0.56
AP3B2-212ENST00000559888 CDK5RAP2Q96SN8 1893 aa18.54■□□□□ 0.56
AP3B2-212ENST00000559888 IDH1O75874 414 aaKnown RBP18.54■□□□□ 0.56
AP3B2-212ENST00000559888 Q3C1V9 767 aa18.54■□□□□ 0.56
AP3B2-212ENST00000559888 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
AP3B2-212ENST00000559888 TRIB2Q92519 343 aa18.54■□□□□ 0.56
AP3B2-212ENST00000559888 NUDT12Q9BQG2 462 aa18.54■□□□□ 0.56
AP3B2-212ENST00000559888 EMILIN3Q9NT22 766 aa18.54■□□□□ 0.56
AP3B2-212ENST00000559888 STAP2Q9UGK3 403 aa18.54■□□□□ 0.56
AP3B2-212ENST00000559888 MAST2Q6P0Q8 1798 aa18.53■□□□□ 0.56
AP3B2-212ENST00000559888 RLBP1P12271 317 aa18.53■□□□□ 0.56
AP3B2-212ENST00000559888 XRCC5P13010 732 aaKnown RBP18.53■□□□□ 0.56
AP3B2-212ENST00000559888 USP17L2Q6R6M4 530 aa18.53■□□□□ 0.56
AP3B2-212ENST00000559888 MIGA1Q8NAN2 632 aa18.53■□□□□ 0.56
AP3B2-212ENST00000559888 NBPF3Q9H094 633 aa18.53■□□□□ 0.56
AP3B2-212ENST00000559888 FOCADQ5VW36 1801 aa18.53■□□□□ 0.56
AP3B2-212ENST00000559888 PLXNB2O15031 1838 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 A0A1W2PPC1 479 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 GH2P01242 217 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 MAPK4P31152 587 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 USP5P45974 858 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 MNX1P50219 401 aaPredicted RBP18.52■□□□□ 0.56
AP3B2-212ENST00000559888 MAP3K21Q5TCX8 1036 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 TATDN1Q6P1N9 297 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 CERS3Q8IU89 383 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.56
AP3B2-212ENST00000559888 MAGEB6Q8N7X4 407 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 SOCS4Q8WXH5 440 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 NDUFB9Q9Y6M9 179 aa18.52■□□□□ 0.56
AP3B2-212ENST00000559888 RANBP2P49792 3224 aaKnown RBP18.51■□□□□ 0.55
AP3B2-212ENST00000559888 PRKAR2AP13861 404 aaKnown RBP18.51■□□□□ 0.55
AP3B2-212ENST00000559888 ERVK-9P63128 1117 aa18.51■□□□□ 0.55
AP3B2-212ENST00000559888 ERVK-24P63145 666 aa18.51■□□□□ 0.55
AP3B2-212ENST00000559888 PDE3AQ14432 1141 aa18.51■□□□□ 0.55
AP3B2-212ENST00000559888 POTEEQ6S8J3 1075 aa18.51■□□□□ 0.55
AP3B2-212ENST00000559888 GTF3C2Q8WUA4 911 aaPredicted RBP18.51■□□□□ 0.55
AP3B2-212ENST00000559888 PAGR1Q9BTK6 254 aa18.51■□□□□ 0.55
AP3B2-212ENST00000559888 ANTXR1Q9H6X2 564 aa18.51■□□□□ 0.55
AP3B2-212ENST00000559888 SERPINB13Q9UIV8 391 aa18.51■□□□□ 0.55
AP3B2-212ENST00000559888 OGDHLQ9ULD0 1010 aa18.51■□□□□ 0.55
AP3B2-212ENST00000559888 MAP3K12Q12852 859 aa18.5■□□□□ 0.55
AP3B2-212ENST00000559888 GPR142Q7Z601 462 aa18.5■□□□□ 0.55
AP3B2-212ENST00000559888 TRMT44Q8IYL2 757 aaKnown RBP18.5■□□□□ 0.55
AP3B2-212ENST00000559888 C7orf61Q8IZ16 206 aa18.5■□□□□ 0.55
AP3B2-212ENST00000559888 USP6NLQ92738 828 aa18.5■□□□□ 0.55
AP3B2-212ENST00000559888 PORCNQ9H237 461 aa18.5■□□□□ 0.55
AP3B2-212ENST00000559888 C11orf49Q9H6J7 331 aa18.5■□□□□ 0.55
AP3B2-212ENST00000559888 ALPK3Q96L96 1907 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 SZT2Q5T011 3432 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 CACNB2Q08289 660 aaPredicted RBP18.49■□□□□ 0.55
AP3B2-212ENST00000559888 ZYXQ15942 572 aaKnown RBP18.49■□□□□ 0.55
AP3B2-212ENST00000559888 MORN1Q5T089 497 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 CEP85Q6P2H3 762 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 TMED8Q6PL24 325 aaPredicted RBP18.49■□□□□ 0.55
AP3B2-212ENST00000559888 PLEKHH3Q7Z736 793 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 TTC6Q86TZ1 520 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 C12orf42Q96LP6 360 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 FEZ1Q99689 392 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 EHD4Q9H223 541 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 MYH1P12882 1939 aa18.49■□□□□ 0.55
AP3B2-212ENST00000559888 USP17L15C9J2P7 530 aa18.48■□□□□ 0.55
AP3B2-212ENST00000559888 USP17L13C9JLJ4 530 aa18.48■□□□□ 0.55
AP3B2-212ENST00000559888 USP17L11C9JVI0 530 aa18.48■□□□□ 0.55
AP3B2-212ENST00000559888 USP17L18D6R9N7 530 aa18.48■□□□□ 0.55
AP3B2-212ENST00000559888 USP17L22D6RA61 530 aa18.48■□□□□ 0.55
AP3B2-212ENST00000559888 USP17L17D6RBQ6 530 aa18.48■□□□□ 0.55
AP3B2-212ENST00000559888 USP17L19D6RCP7 530 aa18.48■□□□□ 0.55
AP3B2-212ENST00000559888 USP17L20D6RJB6 530 aa18.48■□□□□ 0.55
AP3B2-212ENST00000559888 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
AP3B2-212ENST00000559888 BMP8BP34820 402 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms