RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 GJA5P36382 358 aa19.97■□□□□ 0.79
PBX4-202ENST00000557978 TM4SF4P48230 202 aa19.97■□□□□ 0.79
PBX4-202ENST00000557978 GTF2A2P52657 109 aa19.97■□□□□ 0.79
PBX4-202ENST00000557978 ALX1Q15699 326 aa19.97■□□□□ 0.79
PBX4-202ENST00000557978 CYP2D7A0A087X1C5 515 aa19.96■□□□□ 0.79
PBX4-202ENST00000557978 SLC3A2P08195 630 aaKnown RBP19.96■□□□□ 0.79
PBX4-202ENST00000557978 SHMT1P34896 483 aa19.96■□□□□ 0.79
PBX4-202ENST00000557978 RRP1BQ14684 758 aaKnown RBP19.96■□□□□ 0.79
PBX4-202ENST00000557978 VPS53Q5VIR6 699 aa19.96■□□□□ 0.79
PBX4-202ENST00000557978 C16orf86Q6ZW13 317 aa19.96■□□□□ 0.79
PBX4-202ENST00000557978 AS3MTQ9HBK9 375 aa19.96■□□□□ 0.79
PBX4-202ENST00000557978 ZNF287Q9HBT7 754 aa19.96■□□□□ 0.79
PBX4-202ENST00000557978 CABP5Q9NP86 173 aa19.96■□□□□ 0.79
PBX4-202ENST00000557978 ZHX2Q9Y6X8 837 aa19.96■□□□□ 0.79
PBX4-202ENST00000557978 USP17L5A8MUK1 530 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 CXCL11O14625 94 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 GDF11O95390 407 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 CDK8P49336 464 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 SNAPC2Q13487 334 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 DYNLL2Q96FJ2 89 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 WBP1LQ9NX94 342 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 ZMYM6O95789 1325 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 MYH4Q9Y623 1939 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.78
PBX4-202ENST00000557978 FOXP2O15409 715 aa19.94■□□□□ 0.78
PBX4-202ENST00000557978 FGAP02671 866 aa19.94■□□□□ 0.78
PBX4-202ENST00000557978 EVX2Q03828 476 aa19.94■□□□□ 0.78
PBX4-202ENST00000557978 ABCB5Q2M3G0 1257 aa19.94■□□□□ 0.78
PBX4-202ENST00000557978 OTUD7BQ6GQQ9 843 aa19.94■□□□□ 0.78
PBX4-202ENST00000557978 CCDC17Q96LX7 622 aa19.94■□□□□ 0.78
PBX4-202ENST00000557978 ZBTB21Q9ULJ3 1066 aa19.94■□□□□ 0.78
PBX4-202ENST00000557978 KCNH4Q9UQ05 1017 aa19.94■□□□□ 0.78
PBX4-202ENST00000557978 AFG3L2Q9Y4W6 797 aa19.94■□□□□ 0.78
PBX4-202ENST00000557978 TESPA1A2RU30 521 aaPredicted RBP19.93■□□□□ 0.78
PBX4-202ENST00000557978 CA12O43570 354 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 CETPP11597 493 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 PDE4BQ07343 736 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 PPARAQ07869 468 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 MS4A4AQ96JQ5 239 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 DSCC1Q9BVC3 393 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 MKNK2Q9HBH9 465 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 ALDH1A1P00352 501 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 GH2P01242 217 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 CASC1Q6TDU7 716 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 SLC44A5Q8NCS7 719 aa19.93■□□□□ 0.78
PBX4-202ENST00000557978 GREB1LQ9C091 1923 aaPredicted RBP19.92■□□□□ 0.78
PBX4-202ENST00000557978 LOC285556D6RIA3 1793 aa19.92■□□□□ 0.78
PBX4-202ENST00000557978 CCL15-CCL14A0A0B4J2E2 113 aa19.92■□□□□ 0.78
PBX4-202ENST00000557978 MPHOSPH10O00566 681 aaKnown RBP19.92■□□□□ 0.78
PBX4-202ENST00000557978 CCL15Q16663 113 aa19.92■□□□□ 0.78
PBX4-202ENST00000557978 ZNF280CQ8ND82 737 aa19.92■□□□□ 0.78
PBX4-202ENST00000557978 WDR18Q9BV38 432 aa19.92■□□□□ 0.78
PBX4-202ENST00000557978 SMIM22K7EJ46 135 aa19.91■□□□□ 0.78
PBX4-202ENST00000557978 SGSM2O43147 1006 aa19.91■□□□□ 0.78
PBX4-202ENST00000557978 HSPA1AP0DMV8 641 aaKnown RBP19.91■□□□□ 0.78
PBX4-202ENST00000557978 HSPA1BP0DMV9 641 aaKnown RBP19.91■□□□□ 0.78
PBX4-202ENST00000557978 RAB3GAP1Q15042 981 aa19.91■□□□□ 0.78
PBX4-202ENST00000557978 TMEM179Q6ZVK1 233 aa19.91■□□□□ 0.78
PBX4-202ENST00000557978 ZNF444Q8N0Y2 327 aaPredicted RBP19.91■□□□□ 0.78
PBX4-202ENST00000557978 SAGE1Q9NXZ1 904 aa19.91■□□□□ 0.78
PBX4-202ENST00000557978 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.91■□□□□ 0.78
PBX4-202ENST00000557978 CTNNA3Q9UI47 895 aa19.91■□□□□ 0.78
PBX4-202ENST00000557978 ANAPC4Q9UJX5 808 aa19.91■□□□□ 0.78
PBX4-202ENST00000557978 TRIM75PA6NK02 468 aa19.9■□□□□ 0.78
PBX4-202ENST00000557978 JAG1P78504 1218 aa19.9■□□□□ 0.78
PBX4-202ENST00000557978 SPP2Q13103 211 aa19.9■□□□□ 0.78
PBX4-202ENST00000557978 FASTKD5Q7L8L6 764 aaKnown RBP19.9■□□□□ 0.78
PBX4-202ENST00000557978 IFNL1Q8IU54 200 aa19.9■□□□□ 0.78
PBX4-202ENST00000557978 STK11IPQ8N1F8 1099 aa19.9■□□□□ 0.78
PBX4-202ENST00000557978 A0A0G2JLL6 359 aaPredicted RBP19.89■□□□□ 0.77
PBX4-202ENST00000557978 CDC45O75419 566 aa19.89■□□□□ 0.77
PBX4-202ENST00000557978 PRRT2Q7Z6L0 340 aaPredicted RBP19.89■□□□□ 0.77
PBX4-202ENST00000557978 CCDC84Q86UT8 332 aaPredicted RBP19.89■□□□□ 0.77
PBX4-202ENST00000557978 BRI3BPQ8WY22 251 aa19.89■□□□□ 0.77
PBX4-202ENST00000557978 IL25Q9H293 177 aa19.89■□□□□ 0.77
PBX4-202ENST00000557978 RNF186Q9NXI6 227 aa19.89■□□□□ 0.77
PBX4-202ENST00000557978 CASP8AP2Q9UKL3 1982 aa19.89■□□□□ 0.77
PBX4-202ENST00000557978 C19orf81C9J6K1 198 aa19.88■□□□□ 0.77
PBX4-202ENST00000557978 USP17L10C9JJH3 530 aa19.88■□□□□ 0.77
PBX4-202ENST00000557978 ZNF213O14771 459 aa19.88■□□□□ 0.77
PBX4-202ENST00000557978 TRPA1O75762 1119 aa19.88■□□□□ 0.77
PBX4-202ENST00000557978 CTDSPL2Q05D32 466 aa19.88■□□□□ 0.77
PBX4-202ENST00000557978 SHROOM1Q2M3G4 852 aaPredicted RBP19.88■□□□□ 0.77
PBX4-202ENST00000557978 KIAA1211Q6ZU35 1233 aa19.88■□□□□ 0.77
PBX4-202ENST00000557978 ZCCHC17Q9NP64 241 aaKnown RBP19.88■□□□□ 0.77
PBX4-202ENST00000557978 IGF2BP3O00425 579 aaKnown RBP eCLIP19.87■□□□□ 0.77
PBX4-202ENST00000557978 AKR1B1P15121 316 aa19.87■□□□□ 0.77
PBX4-202ENST00000557978 RASA1P20936 1047 aa19.87■□□□□ 0.77
PBX4-202ENST00000557978 BACE1P56817 501 aa19.87■□□□□ 0.77
PBX4-202ENST00000557978 SEPT2Q15019 361 aa19.87■□□□□ 0.77
PBX4-202ENST00000557978 IMMTQ16891 758 aaKnown RBP19.87■□□□□ 0.77
PBX4-202ENST00000557978 PROCA1Q8NCQ7 364 aaPredicted RBP19.87■□□□□ 0.77
PBX4-202ENST00000557978 PTPN18Q99952 460 aa19.87■□□□□ 0.77
PBX4-202ENST00000557978 ESYT1Q9BSJ8 1104 aa19.87■□□□□ 0.77
PBX4-202ENST00000557978 PCP11498 1178 aaKnown RBP19.86■□□□□ 0.77
PBX4-202ENST00000557978 GUCY1A2P33402 732 aa19.86■□□□□ 0.77
PBX4-202ENST00000557978 SH3D19Q5HYK7 790 aa19.86■□□□□ 0.77
PBX4-202ENST00000557978 RNF41Q9H4P4 317 aaPredicted RBP19.86■□□□□ 0.77
PBX4-202ENST00000557978 PRDM1O75626 825 aa19.85■□□□□ 0.77
PBX4-202ENST00000557978 FGRP09769 529 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms