RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 KCNH4Q9UQ05 1017 aa16.3■□□□□ 0.2
SHMT2-234ENST00000557703 TESPA1A2RU30 521 aaPredicted RBP16.29■□□□□ 0.2
SHMT2-234ENST00000557703 CDC45O75419 566 aa16.29■□□□□ 0.2
SHMT2-234ENST00000557703 CETPP11597 493 aa16.29■□□□□ 0.2
SHMT2-234ENST00000557703 SHMT1P34896 483 aa16.29■□□□□ 0.2
SHMT2-234ENST00000557703 CDK8P49336 464 aa16.29■□□□□ 0.2
SHMT2-234ENST00000557703 KIAA1211Q6ZU35 1233 aa16.29■□□□□ 0.2
SHMT2-234ENST00000557703 BEGAINQ9BUH8 593 aa16.29■□□□□ 0.2
SHMT2-234ENST00000557703 FZD1Q9UP38 647 aa16.29■□□□□ 0.2
SHMT2-234ENST00000557703 BAZ2AQ9UIF9 1905 aaKnown RBP16.29■□□□□ 0.2
SHMT2-234ENST00000557703 MINDY4BA8MYZ0 360 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 C19orf81C9J6K1 198 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 EPB41L2O43491 1005 aaKnown RBP16.28■□□□□ 0.2
SHMT2-234ENST00000557703 FGRP09769 529 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 PPARAQ07869 468 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 ABCB5Q2M3G0 1257 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 CCDC129Q6ZRS4 1044 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 TMEM179Q6ZVK1 233 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 RNF41Q9H4P4 317 aaPredicted RBP16.28■□□□□ 0.2
SHMT2-234ENST00000557703 MKNK2Q9HBH9 465 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 SAGE1Q9NXZ1 904 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 AFG3L2Q9Y4W6 797 aa16.28■□□□□ 0.2
SHMT2-234ENST00000557703 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.2
SHMT2-234ENST00000557703 SIPA1L1O43166 1804 aa16.27■□□□□ 0.2
SHMT2-234ENST00000557703 IRF6O14896 467 aa16.27■□□□□ 0.2
SHMT2-234ENST00000557703 FOXP2O15409 715 aa16.27■□□□□ 0.2
SHMT2-234ENST00000557703 KIF23Q02241 960 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-234ENST00000557703 FASTKD5Q7L8L6 764 aaKnown RBP16.27■□□□□ 0.2
SHMT2-234ENST00000557703 ZNF444Q8N0Y2 327 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-234ENST00000557703 ZNF280CQ8ND82 737 aa16.27■□□□□ 0.2
SHMT2-234ENST00000557703 OTUD5Q96G74 571 aa16.27■□□□□ 0.2
SHMT2-234ENST00000557703 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
SHMT2-234ENST00000557703 SYNPO2Q9UMS6 1093 aa16.27■□□□□ 0.2
SHMT2-234ENST00000557703 ZHX2Q9Y6X8 837 aa16.27■□□□□ 0.2
SHMT2-234ENST00000557703 OTOFQ9HC10 1997 aa16.27■□□□□ 0.19
SHMT2-234ENST00000557703 LAMB1P07942 1786 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 ZNF213O14771 459 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 ORC4O43929 436 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 IMMTQ16891 758 aaKnown RBP16.26■□□□□ 0.19
SHMT2-234ENST00000557703 VPS53Q5VIR6 699 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 MS4A4AQ96JQ5 239 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 ESYT1Q9BSJ8 1104 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 CFHR5Q9BXR6 569 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 WBP1LQ9NX94 342 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-234ENST00000557703 DOCK1Q14185 1865 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 PCNTO95613 3336 aa16.26■□□□□ 0.19
SHMT2-234ENST00000557703 FAM196BA6NMK8 535 aa16.25■□□□□ 0.19
SHMT2-234ENST00000557703 GH2P01242 217 aa16.25■□□□□ 0.19
SHMT2-234ENST00000557703 CYP2D6P10635 497 aa16.25■□□□□ 0.19
SHMT2-234ENST00000557703 USP14P54578 494 aa16.25■□□□□ 0.19
SHMT2-234ENST00000557703 GRM1Q13255 1194 aa16.25■□□□□ 0.19
SHMT2-234ENST00000557703 SH3D19Q5HYK7 790 aa16.25■□□□□ 0.19
SHMT2-234ENST00000557703 PROCA1Q8NCQ7 364 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-234ENST00000557703 MAP4K1Q92918 833 aa16.25■□□□□ 0.19
SHMT2-234ENST00000557703 SH2D4AQ9H788 454 aa16.25■□□□□ 0.19
SHMT2-234ENST00000557703 SLC45A1Q9Y2W3 748 aa16.25■□□□□ 0.19
SHMT2-234ENST00000557703 A0A0G2JLL6 359 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-234ENST00000557703 USP17L10C9JJH3 530 aa16.24■□□□□ 0.19
SHMT2-234ENST00000557703 GJA5P36382 358 aa16.24■□□□□ 0.19
SHMT2-234ENST00000557703 PRRT2Q7Z6L0 340 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-234ENST00000557703 STAG1Q8WVM7 1258 aa16.24■□□□□ 0.19
SHMT2-234ENST00000557703 DYNLL2Q96FJ2 89 aa16.24■□□□□ 0.19
SHMT2-234ENST00000557703 CNNM2Q9H8M5 875 aa16.24■□□□□ 0.19
SHMT2-234ENST00000557703 CYP2D7A0A087X1C5 515 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 AOC2O75106 756 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 REC8O95072 547 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 RASA1P20936 1047 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 BACE1P56817 501 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 PABPC4Q13310 644 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHMT2-234ENST00000557703 SLC4A8Q2Y0W8 1093 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 CCDC178Q5BJE1 867 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 NOM1Q5C9Z4 860 aaKnown RBP16.23■□□□□ 0.19
SHMT2-234ENST00000557703 AKNAD1Q5T1N1 836 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 MFSD6Q6ZSS7 791 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHMT2-234ENST00000557703 PLIN4Q96Q06 1357 aa16.23■□□□□ 0.19
SHMT2-234ENST00000557703 MYH8P13535 1937 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 CCL15-CCL14A0A0B4J2E2 113 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 MPHOSPH10O00566 681 aaKnown RBP16.22■□□□□ 0.19
SHMT2-234ENST00000557703 GDF11O95390 407 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 SPP2Q13103 211 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 RRP1BQ14684 758 aaKnown RBP16.22■□□□□ 0.19
SHMT2-234ENST00000557703 CCL15Q16663 113 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 ANKRD23Q86SG2 305 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 IFNL1Q8IU54 200 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 NEDD1Q8NHV4 660 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 KIAA1683Q9H0B3 1180 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 ARHGEF10LQ9HCE6 1279 aa16.22■□□□□ 0.19
SHMT2-234ENST00000557703 TSPY3P0CV98 308 aa16.21■□□□□ 0.19
SHMT2-234ENST00000557703 TSPY8P0CW00 308 aa16.21■□□□□ 0.19
SHMT2-234ENST00000557703 SLURP2P0DP57 97 aa16.21■□□□□ 0.19
SHMT2-234ENST00000557703 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
SHMT2-234ENST00000557703 RNF20Q5VTR2 975 aa16.21■□□□□ 0.19
SHMT2-234ENST00000557703 SLC44A5Q8NCS7 719 aa16.21■□□□□ 0.19
SHMT2-234ENST00000557703 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
SHMT2-234ENST00000557703 LPAR1Q92633 364 aa16.21■□□□□ 0.19
SHMT2-234ENST00000557703 ESR2Q92731 530 aa16.21■□□□□ 0.19
SHMT2-234ENST00000557703 C12orf42Q96LP6 360 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms