RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	CTDSPL2	Q05D32	466 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	PNOC	Q13519	176 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	MYL5	Q02045	173 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	CCDC178	Q5BJE1	867 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	LPIN2	Q92539	896 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	WASF1	Q92558	559 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	NYX	Q9GZU5	481 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	JADE2	Q9NQC1	790 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	SHTN1	A0MZ66	631 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	AFM	P43652	599 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	EVC	P57679	992 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	UBE4A	Q14139	1066 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	NLRP10	Q86W26	655 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	CLIC6	Q96NY7	704 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	GSTTP1	A0A1W2PQM5	241 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	ADD2	P35612	726 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	IFFO1	Q0D2I5	559 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	TMEM87B	Q96K49	555 aa		13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	AFDN	P55196	1824 aa	Known RBP	13.93	□□□□□ -0.18
TMPO-212	ENST00000556029	TMCO5B	A8MYB1	307 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	ZNF76	P36508	570 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	NLRP5	P59047	1200 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	TBC1D10C	Q8IV04	446 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	BPIFA3	Q9BQP9	254 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	SRP68	Q9UHB9	627 aa	Known RBP	13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	MAP2K1	Q02750	393 aa	Predicted RBP	13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	DNAJC21	Q5F1R6	531 aa	Known RBP	13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	TCERG1L	Q5VWI1	586 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	APOA5	Q6Q788	366 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	RSPH14	Q9UHP6	348 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	WDHD1	O75717	1129 aa	Predicted RBP	13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	BAG3	O95817	575 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	ZSCAN20	P17040	1043 aa	Predicted RBP	13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	USP8	P40818	1118 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	MNAT1	P51948	309 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	CCDC96	Q2M329	555 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	NYAP1	Q6ZVC0	841 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	CYB5R4	Q7L1T6	521 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	FBXL16	Q8N461	479 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	SPATA5	Q8NB90	893 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	GIMAP7	Q8NHV1	300 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	ESR2	Q92731	530 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	PPP1R13B	Q96KQ4	1090 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	SERPINA10	Q9UK55	444 aa		13.92	□□□□□ -0.18
TMPO-212	ENST00000556029	hCG_1642624	A0A1W2PR95	340 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	ATP1A3	P13637	1013 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	PAFAH1B1	P43034	410 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	CHMP4BP1	P59074	171 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	RTN1	Q16799	776 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	MSL1	Q68DK7	614 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	KCNH3	Q9ULD8	1083 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	RGPD5	Q99666	1765 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	SH2B2	O14492	632 aa	Predicted RBP	13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	PDE6A	P16499	860 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	IFIT1B	Q5T764	474 aa	Known RBP	13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	PIH1D3	Q9NQM4	214 aa	Known RBP	13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	DENND2A	Q9ULE3	1009 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	N4BP3	O15049	544 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	PDE4B	Q07343	736 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	UTP14C	Q5TAP6	766 aa	Known RBP	13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	ARMCX5	Q6P1M9	558 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	SAP30BP	Q9UHR5	308 aa	Known RBP	13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	UFL1	O94874	794 aa		13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	HIBADH	P31937	336 aa	Known RBP	13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	NOP2	P46087	812 aa	Known RBP	13.91	□□□□□ -0.18
TMPO-212	ENST00000556029	CUTA	O60888	179 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	MTIF2	P46199	727 aa	Known RBP	13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	BMS1	Q14692	1282 aa	Known RBP	13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	NBPF11	Q86T75	865 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	KRT222	Q8N1A0	295 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	KRI1	Q8N9T8	703 aa	Known RBP	13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	TIGD1	Q96MW7	591 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	IKBKB	O14920	756 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	PPP6R2	O75170	966 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	LDHC	P07864	332 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	RPS8	P62241	208 aa	Known RBP	13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	UBE3C	Q15386	1083 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	FKBP15	Q5T1M5	1219 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	CTR9	Q6PD62	1173 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	TTLL11	Q8NHH1	800 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	GBP3	Q9H0R5	595 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	ADAMTSL3	P82987	1691 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	CDC27	P30260	824 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	IL6ST	P40189	918 aa	Predicted RBP	13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	SDR42E1	Q8WUS8	393 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	KAT14	Q9H8E8	782 aa		13.9	□□□□□ -0.18
TMPO-212	ENST00000556029	WDR19	Q8NEZ3	1342 aa		13.9	□□□□□ -0.19
TMPO-212	ENST00000556029	PSD	A5PKW4	1024 aa	Predicted RBP	13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	PDE8B	O95263	885 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	KRT23	Q9C075	422 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	INCENP	Q9NQS7	918 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	SCN11A	Q9UI33	1791 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	MROH7-TTC4	A0A0A0MT08	1334 aa		13.89	□□□□□ -0.19
TMPO-212	ENST00000556029	STX17	P56962	302 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms