RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 GSG1L2A8MUP6 293 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 USP17L12C9JPN9 530 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 USP17L21D6R901 530 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 H0YGN5 161 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 PRKAB2O43741 272 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 ABCB7O75027 752 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 ALDH1A1P00352 501 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 ASNSP08243 561 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 CAP2P40123 477 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 TDO2P48775 406 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 RASAL3Q86YV0 1011 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 ZNF296Q8WUU4 475 aaPredicted RBP12.65□□□□□ -0.38
TMEM260-206ENST00000555046 OPTNQ96CV9 577 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 ELP3Q9H9T3 547 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
TMEM260-206ENST00000555046 POLR2AP24928 1970 aaKnown RBP12.64□□□□□ -0.39
TMEM260-206ENST00000555046 CXCL11O14625 94 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 CETPP11597 493 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 INPP5BP32019 993 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 TM4SF4P48230 202 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 SNAPC2Q13487 334 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 ALX1Q15699 326 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
TMEM260-206ENST00000555046 C12orf60Q5U649 245 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 CTR9Q6PD62 1173 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 CASC1Q6TDU7 716 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 CWC27Q6UX04 472 aaKnown RBP12.64□□□□□ -0.39
TMEM260-206ENST00000555046 IFNL3Q8IZI9 196 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 CLMNQ96JQ2 1002 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 CCDC17Q96LX7 622 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 NAPBQ9H115 298 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 AS3MTQ9HBK9 375 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
TMEM260-206ENST00000555046 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
TMEM260-206ENST00000555046 MUC3AQ02505 3323 aa12.64□□□□□ -0.39
TMEM260-206ENST00000555046 MYH2Q9UKX2 1941 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 MYH13Q9UKX3 1938 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 M0R2C6 588 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 CHGBP05060 677 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 PTPRAP18433 802 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 PLCD1P51178 756 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 NMIQ13287 307 aaPredicted RBP12.63□□□□□ -0.39
TMEM260-206ENST00000555046 PPIL2Q13356 520 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 BMP2KLQ5H9B9 411 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 TATDN1Q6P1N9 297 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 FASTKD5Q7L8L6 764 aaKnown RBP12.63□□□□□ -0.39
TMEM260-206ENST00000555046 CTNNA3Q9UI47 895 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 SNCAIPQ9Y6H5 919 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 ZHX2Q9Y6X8 837 aa12.63□□□□□ -0.39
TMEM260-206ENST00000555046 MINDY4BA8MYZ0 360 aa12.62□□□□□ -0.39
TMEM260-206ENST00000555046 GSPT1P15170 499 aaKnown RBP12.62□□□□□ -0.39
TMEM260-206ENST00000555046 PDE4BQ07343 736 aa12.62□□□□□ -0.39
TMEM260-206ENST00000555046 ZNF444Q8N0Y2 327 aaPredicted RBP12.62□□□□□ -0.39
TMEM260-206ENST00000555046 FAM227BQ96M60 508 aa12.62□□□□□ -0.39
TMEM260-206ENST00000555046 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
TMEM260-206ENST00000555046 MKNK2Q9HBH9 465 aa12.62□□□□□ -0.39
TMEM260-206ENST00000555046 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
TMEM260-206ENST00000555046 SSC5DA1L4H1 1573 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 TESPA1A2RU30 521 aaPredicted RBP12.61□□□□□ -0.39
TMEM260-206ENST00000555046 NT5C2P49902 561 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 GABPAQ06546 454 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
TMEM260-206ENST00000555046 ABCB5Q2M3G0 1257 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 PPP4R3BQ5MIZ7 849 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 C16orf86Q6ZW13 317 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
TMEM260-206ENST00000555046 PRDM6Q9NQX0 595 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 EYSQ5T1H1 3165 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 RAD50Q92878 1312 aa12.61□□□□□ -0.39
TMEM260-206ENST00000555046 A0A0D9SFI3 127 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 C19orf81C9J6K1 198 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 IRF6O14896 467 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 HSPD1P10809 573 aaKnown RBP12.6□□□□□ -0.39
TMEM260-206ENST00000555046 PCP11498 1178 aaKnown RBP12.6□□□□□ -0.39
TMEM260-206ENST00000555046 EN2P19622 333 aaPredicted RBP12.6□□□□□ -0.39
TMEM260-206ENST00000555046 CHMLP26374 656 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 CDK8P49336 464 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 SLC4A8Q2Y0W8 1093 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 ZNF280CQ8ND82 737 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 DSCC1Q9BVC3 393 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 KCNH4Q9UQ05 1017 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 AFG3L2Q9Y4W6 797 aa12.6□□□□□ -0.39
TMEM260-206ENST00000555046 CCL15-CCL14A0A0B4J2E2 113 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 FAM196BA6NMK8 535 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
TMEM260-206ENST00000555046 GH2P01242 217 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 FGAP02671 866 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 SHMT1P34896 483 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 PPARAQ07869 468 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 CCL15Q16663 113 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 IFNL1Q8IU54 200 aa12.59□□□□□ -0.39
TMEM260-206ENST00000555046 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms