RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.67
SYNE2-213ENST00000554805 FCHSD1Q86WN1 690 aa10.83□□□□□ -0.67
SYNE2-213ENST00000554805 FANCBQ8NB91 859 aa10.83□□□□□ -0.67
SYNE2-213ENST00000554805 ENOX1Q8TC92 643 aaKnown RBP10.83□□□□□ -0.67
SYNE2-213ENST00000554805 C8orf37Q96NL8 207 aa10.83□□□□□ -0.67
SYNE2-213ENST00000554805 TRERF1Q96PN7 1200 aa10.83□□□□□ -0.67
SYNE2-213ENST00000554805 PARP3Q9Y6F1 533 aa10.83□□□□□ -0.67
SYNE2-213ENST00000554805 ABCC6O95255 1503 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 MTF1Q14872 753 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 ZNF174Q15697 407 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 SMYD4Q8IYR2 804 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-213ENST00000554805 CRACR2BQ8N4Y2 399 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-213ENST00000554805 IGSF22Q8N9C0 903 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 SDR42E1Q8WUS8 393 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 PUF60Q9UHX1 559 aaKnown RBP10.83□□□□□ -0.68
SYNE2-213ENST00000554805 FHOD1Q9Y613 1164 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 CDHR2Q9BYE9 1310 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 A0A0U1RQG5 324 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-213ENST00000554805 FAM205CA6NFA0 338 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 CCDC175P0C221 793 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 IGHMBP2P38935 993 aaKnown RBP10.83□□□□□ -0.68
SYNE2-213ENST00000554805 ALX1Q15699 326 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 KIF4BQ2VIQ3 1234 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 TMTC2Q8N394 836 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 EPSTI1Q96J88 318 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 IRX2Q9BZI1 471 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-213ENST00000554805 FOXP1Q9H334 677 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-213ENST00000554805 BRMS1Q9HCU9 246 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 V9GY48 417 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-213ENST00000554805 RIC1Q4ADV7 1423 aa10.83□□□□□ -0.68
SYNE2-213ENST00000554805 TCRBV5S4A2TA0A5A2 114 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 SOWAHDA6NJG2 315 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 TEX33O43247 280 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-213ENST00000554805 PDE4CQ08493 712 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 TC2NQ8N9U0 490 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 ARFGAP3Q9NP61 516 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 MROH5Q6ZUA9 1318 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 STK36Q9NRP7 1315 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 KIF5CO60282 957 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 PLCD1P51178 756 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 TAF3Q5VWG9 929 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 RASSF8Q8NHQ8 419 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 ADAMTS7Q9UKP4 1686 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 FAM237AA0A1B0GTK4 181 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 CCT6AP40227 531 aaKnown RBP10.82□□□□□ -0.68
SYNE2-213ENST00000554805 PLA2G4AP47712 749 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 KCNQ4P56696 695 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 MORC3Q14149 939 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 VGLL2Q8N8G2 317 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 ESR2Q92731 530 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 GOLGA1Q92805 767 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 ZNF512BQ96KM6 892 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-213ENST00000554805 SRPRBQ9Y5M8 271 aaKnown RBP10.82□□□□□ -0.68
SYNE2-213ENST00000554805 TACC3Q9Y6A5 838 aa10.82□□□□□ -0.68
SYNE2-213ENST00000554805 GNAT2P19087 354 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 PPARAQ07869 468 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 ZNF569Q5MCW4 686 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 NGLY1Q96IV0 654 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 SYNRGQ9UMZ2 1314 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 KRT2P35908 639 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 MDM2Q00987 491 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-213ENST00000554805 RBL2Q08999 1139 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 CATIPQ7Z7H3 387 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 ZCCHC17Q9NP64 241 aaKnown RBP10.81□□□□□ -0.68
SYNE2-213ENST00000554805 CAMTA1Q9Y6Y1 1673 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 TNKSO95271 1327 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 TRPM3Q9HCF6 1732 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-213ENST00000554805 IFIT1BQ5T764 474 aaKnown RBP10.81□□□□□ -0.68
SYNE2-213ENST00000554805 RRAGBQ5VZM2 374 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 GPR161Q8N6U8 529 aaKnown RBP10.81□□□□□ -0.68
SYNE2-213ENST00000554805 TRIML1Q8N9V2 468 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 BLZF1Q9H2G9 400 aa10.81□□□□□ -0.68
SYNE2-213ENST00000554805 CYP2D7A0A087X1C5 515 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 N4BP3O15049 544 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 FANCGO15287 622 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 OAS2P29728 719 aaKnown RBP10.8□□□□□ -0.68
SYNE2-213ENST00000554805 TMEM139Q8IV31 216 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 ANKRD20A12PQ8NF67 263 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 STAG1Q8WVM7 1258 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 SYMPKQ92797 1274 aaKnown RBP10.8□□□□□ -0.68
SYNE2-213ENST00000554805 PARD6BQ9BYG5 372 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 MRPL44Q9H9J2 332 aaKnown RBP10.8□□□□□ -0.68
SYNE2-213ENST00000554805 CTNND2Q9UQB3 1225 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 MAGEB6P1A0A0J9YX57 407 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 ACTN4O43707 911 aaKnown RBP10.8□□□□□ -0.68
SYNE2-213ENST00000554805 GPS2Q13227 327 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 SPATA1Q5VX52 437 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 VPS16Q9H269 839 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 CALCOCO1Q9P1Z2 691 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 MTMR7Q9Y216 660 aa10.8□□□□□ -0.68
SYNE2-213ENST00000554805 CYP19A1P11511 503 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-213ENST00000554805 ZNF18P17022 549 aa10.79□□□□□ -0.68
SYNE2-213ENST00000554805 ERCC5P28715 1186 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-213ENST00000554805 MAP3K9P80192 1104 aa10.79□□□□□ -0.68
SYNE2-213ENST00000554805 TBX2Q13207 712 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-213ENST00000554805 NUP88Q99567 741 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-213ENST00000554805 MAPK8IP1Q9UQF2 711 aa10.79□□□□□ -0.68
SYNE2-213ENST00000554805 SMIM22K7EJ46 135 aa10.79□□□□□ -0.68
SYNE2-213ENST00000554805 NLRP5P59047 1200 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms