RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 K7ELQ4 463 aaPredicted RBP14.42□□□□□ -0.1
RIPK3-204ENST00000554756 FOXP2O15409 715 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 CTNND1O60716 968 aaKnown RBP14.42□□□□□ -0.1
RIPK3-204ENST00000554756 DDIT3P35638 169 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 SHROOM1Q2M3G4 852 aaPredicted RBP14.42□□□□□ -0.1
RIPK3-204ENST00000554756 CCDC84Q86UT8 332 aaPredicted RBP14.42□□□□□ -0.1
RIPK3-204ENST00000554756 PICK1Q9NRD5 415 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 ARPP21Q9UBL0 812 aaPredicted RBP14.42□□□□□ -0.1
RIPK3-204ENST00000554756 SPDYE5A6NIY4 337 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 GDF11O95390 407 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 CAP2P40123 477 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 JAG1P78504 1218 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 GABPAQ06546 454 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 GSE1Q14687 1217 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 SBK1Q52WX2 424 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 ERO1BQ86YB8 467 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 NAV1Q8NEY1 1877 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 IL25Q9H293 177 aa14.41□□□□□ -0.1
RIPK3-204ENST00000554756 HSPD1P10809 573 aaKnown RBP14.4□□□□□ -0.1
RIPK3-204ENST00000554756 SHMT1P34896 483 aa14.4□□□□□ -0.1
RIPK3-204ENST00000554756 MAP2K2P36507 400 aa14.4□□□□□ -0.1
RIPK3-204ENST00000554756 RUFY2Q8WXA3 655 aa14.4□□□□□ -0.1
RIPK3-204ENST00000554756 DDX60LQ5H9U9 1706 aaKnown RBP14.4□□□□□ -0.1
RIPK3-204ENST00000554756 SIPA1L1O43166 1804 aa14.4□□□□□ -0.1
RIPK3-204ENST00000554756 PTPRAP18433 802 aa14.39□□□□□ -0.11
RIPK3-204ENST00000554756 PTMSP20962 102 aa14.39□□□□□ -0.11
RIPK3-204ENST00000554756 CDK8P49336 464 aa14.39□□□□□ -0.11
RIPK3-204ENST00000554756 CERKLQ49MI3 558 aaPredicted RBP14.39□□□□□ -0.11
RIPK3-204ENST00000554756 ZHX2Q9Y6X8 837 aa14.39□□□□□ -0.11
RIPK3-204ENST00000554756 OTOFQ9HC10 1997 aa14.39□□□□□ -0.11
RIPK3-204ENST00000554756 ZBTB48P10074 688 aaPredicted RBP14.39□□□□□ -0.11
RIPK3-204ENST00000554756 TATDN1Q6P1N9 297 aa14.39□□□□□ -0.11
RIPK3-204ENST00000554756 IL17RAQ96F46 866 aa14.39□□□□□ -0.11
RIPK3-204ENST00000554756 MYH1P12882 1939 aa14.39□□□□□ -0.11
RIPK3-204ENST00000554756 MPHOSPH10O00566 681 aaKnown RBP14.38□□□□□ -0.11
RIPK3-204ENST00000554756 IRF6O14896 467 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 GH2P01242 217 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 FGAP02671 866 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 MCCP23508 829 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 ANAPC15P60006 121 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 PPATQ06203 517 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 PPARAQ07869 468 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 PPIL2Q13356 520 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 C16orf86Q6ZW13 317 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 SWAP70Q9UH65 585 aa14.38□□□□□ -0.11
RIPK3-204ENST00000554756 ST18O60284 1047 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 CTDSPL2Q05D32 466 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 ALX1Q15699 326 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 ABCB5Q2M3G0 1257 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 ZBTB21Q9ULJ3 1066 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 RAD50Q92878 1312 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 MANSC4A6NHS7 340 aaPredicted RBP14.37□□□□□ -0.11
RIPK3-204ENST00000554756 DDX11L8A8MPP1 907 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 USP17L5A8MUK1 530 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 SGSM2O43147 1006 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 ESYT1Q9BSJ8 1104 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 CABP5Q9NP86 173 aa14.37□□□□□ -0.11
RIPK3-204ENST00000554756 CCL15-CCL14A0A0B4J2E2 113 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 TRIM75PA6NK02 468 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 PRDM1O75626 825 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 ASNSP08243 561 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 AKR1B1P15121 316 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 MCM2P49736 904 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 GTF2A2P52657 109 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 HAND2P61296 217 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 MAP2K1Q02750 393 aaPredicted RBP14.36□□□□□ -0.11
RIPK3-204ENST00000554756 SREBF2Q12772 1141 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 RAB3GAP1Q15042 981 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 CCL15Q16663 113 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 MS4A4AQ96JQ5 239 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 MKNK2Q9HBH9 465 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 INCENPQ9NQS7 918 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 AFG3L2Q9Y4W6 797 aa14.36□□□□□ -0.11
RIPK3-204ENST00000554756 BAZ2AQ9UIF9 1905 aaKnown RBP14.36□□□□□ -0.11
RIPK3-204ENST00000554756 HSP90AA1P07900 732 aaKnown RBP14.35□□□□□ -0.11
RIPK3-204ENST00000554756 SLC3A2P08195 630 aaKnown RBP14.35□□□□□ -0.11
RIPK3-204ENST00000554756 PTH1RQ03431 593 aa14.35□□□□□ -0.11
RIPK3-204ENST00000554756 SPP2Q13103 211 aa14.35□□□□□ -0.11
RIPK3-204ENST00000554756 SNAPC2Q13487 334 aa14.35□□□□□ -0.11
RIPK3-204ENST00000554756 SEPT2Q15019 361 aa14.35□□□□□ -0.11
RIPK3-204ENST00000554756 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
RIPK3-204ENST00000554756 ROBO3Q96MS0 1386 aa14.35□□□□□ -0.11
RIPK3-204ENST00000554756 HSPA1AP0DMV8 641 aaKnown RBP14.34□□□□□ -0.11
RIPK3-204ENST00000554756 HSPA1BP0DMV9 641 aaKnown RBP14.34□□□□□ -0.11
RIPK3-204ENST00000554756 CETPP11597 493 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 RASA1P20936 1047 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 GUCY1A2P33402 732 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 MCM4P33991 863 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 TM4SF4P48230 202 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 TNS4Q8IZW8 715 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 BRI3BPQ8WY22 251 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 AS3MTQ9HBK9 375 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 GINM1Q9NU53 330 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 WBP1LQ9NX94 342 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 KCNH4Q9UQ05 1017 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 TACC3Q9Y6A5 838 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 THSD7BQ9C0I4 1608 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 CXCL11O14625 94 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 IFNL1Q8IU54 200 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms