RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, human

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN21-204	ENST00000554178	MECOM	Q03112	1051 aa		12.05	□□□□□ -0.48
PTPN21-204	ENST00000554178	ZNF384	Q8TF68	577 aa		12.05	□□□□□ -0.48
PTPN21-204	ENST00000554178	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.05	□□□□□ -0.48
PTPN21-204	ENST00000554178	C11orf49	Q9H6J7	331 aa		12.05	□□□□□ -0.48
PTPN21-204	ENST00000554178	SMC4	Q9NTJ3	1288 aa		12.05	□□□□□ -0.48
PTPN21-204	ENST00000554178	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.05	□□□□□ -0.48
PTPN21-204	ENST00000554178	PFAS	O15067	1338 aa		12.05	□□□□□ -0.48
PTPN21-204	ENST00000554178	ZNF521	Q96K83	1311 aa		12.05	□□□□□ -0.48
PTPN21-204	ENST00000554178	SEMA3E	O15041	775 aa		12.04	□□□□□ -0.48
PTPN21-204	ENST00000554178	CIAO1	O76071	339 aa		12.04	□□□□□ -0.48
PTPN21-204	ENST00000554178	RHBDL3	P58872	404 aa		12.04	□□□□□ -0.48
PTPN21-204	ENST00000554178	TIMM10	P62072	90 aa		12.04	□□□□□ -0.48
PTPN21-204	ENST00000554178	MTMR2	Q13614	643 aa		12.04	□□□□□ -0.48
PTPN21-204	ENST00000554178	TBC1D9	Q6ZT07	1266 aa		12.04	□□□□□ -0.48
PTPN21-204	ENST00000554178	HMX1	Q9NP08	348 aa	Predicted RBP	12.04	□□□□□ -0.48
PTPN21-204	ENST00000554178	COL11A1	P12107	1806 aa	Predicted RBP	12.03	□□□□□ -0.48
PTPN21-204	ENST00000554178	PARP14	Q460N5	1801 aa		12.03	□□□□□ -0.48
PTPN21-204	ENST00000554178	MDM2	Q00987	491 aa	Predicted RBP	12.03	□□□□□ -0.48
PTPN21-204	ENST00000554178	ZGPAT	Q8N5A5	531 aa	Known RBP	12.03	□□□□□ -0.48
PTPN21-204	ENST00000554178	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.03	□□□□□ -0.48
PTPN21-204	ENST00000554178	ZNF280C	Q8ND82	737 aa		12.03	□□□□□ -0.48
PTPN21-204	ENST00000554178	MEIS3	Q99687	375 aa		12.03	□□□□□ -0.48
PTPN21-204	ENST00000554178	UBE2O	Q9C0C9	1292 aa	Known RBP	12.03	□□□□□ -0.48
PTPN21-204	ENST00000554178	NBPF3	Q9H094	633 aa		12.03	□□□□□ -0.48
PTPN21-204	ENST00000554178	COL2A1	P02458	1487 aa	Predicted RBP	12.02	□□□□□ -0.48
PTPN21-204	ENST00000554178	PLXNA1	Q9UIW2	1896 aa		12.02	□□□□□ -0.48
PTPN21-204	ENST00000554178		A0A1B0GUL7	405 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	GDF11	O95390	407 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	IL15	P40933	162 aa	Predicted RBP	12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	IRX3	P78415	501 aa	Predicted RBP	12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	TFCP2	Q12800	502 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	CCL14	Q16627	93 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	ERICH6	Q7L0X2	663 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	TDH	Q8IZJ6	230 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	XAGE2	Q96GT9	111 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	FAM161B	Q96MY7	647 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	PAGR1	Q9BTK6	254 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	RAI14	Q9P0K7	980 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	RPTOR	Q8N122	1335 aa		12.02	□□□□□ -0.49
PTPN21-204	ENST00000554178	ZNFX1	Q9P2E3	1918 aa	Known RBP	12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178		A0A0G2JMZ2	1700 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	CCND3	P30281	292 aa	Predicted RBP	12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	JAG1	P78504	1218 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	MAP3K10	Q02779	954 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	SLF2	Q8IX21	1173 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	TEX11	Q8IYF3	940 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	PDCD7	Q8N8D1	485 aa	Known RBP	12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	ANKLE1	Q8NAG6	615 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	CDCA7L	Q96GN5	454 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	NEUROD6	Q96NK8	337 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	TXNRD2	Q9NNW7	524 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	GJD2	Q9UKL4	321 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	NDUFB9	Q9Y6M9	179 aa		12.01	□□□□□ -0.49
PTPN21-204	ENST00000554178	GPR75-ASB3	A0A0A6YYF3	556 aa		12	□□□□□ -0.49
PTPN21-204	ENST00000554178	ZKSCAN1	P17029	563 aa	Predicted RBP	12	□□□□□ -0.49
PTPN21-204	ENST00000554178	BMP8B	P34820	402 aa		12	□□□□□ -0.49
PTPN21-204	ENST00000554178	CAP2	P40123	477 aa		12	□□□□□ -0.49
PTPN21-204	ENST00000554178	GCLC	P48506	637 aa	Predicted RBP	12	□□□□□ -0.49
PTPN21-204	ENST00000554178	ZYX	Q15942	572 aa	Known RBP	12	□□□□□ -0.49
PTPN21-204	ENST00000554178	LRRC26	Q2I0M4	334 aa		12	□□□□□ -0.49
PTPN21-204	ENST00000554178	SPTY2D1	Q68D10	685 aa	Predicted RBP	12	□□□□□ -0.49
PTPN21-204	ENST00000554178	PORCN	Q9H237	461 aa		12	□□□□□ -0.49
PTPN21-204	ENST00000554178	MTMR10	Q9NXD2	777 aa		12	□□□□□ -0.49
PTPN21-204	ENST00000554178	HMG20B	Q9P0W2	317 aa		12	□□□□□ -0.49
PTPN21-204	ENST00000554178	PRUNE2	Q8WUY3	3088 aa		12	□□□□□ -0.49
PTPN21-204	ENST00000554178	USP17L5	A8MUK1	530 aa		11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	HERVK_113	P62684	666 aa		11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	MVP	Q14764	893 aa	Known RBP	11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	MAPKAPK5	Q8IW41	473 aa		11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	NSUN4	Q96CB9	384 aa	Known RBP	11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	DNAJC18	Q9H819	358 aa		11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	SAP30BP	Q9UHR5	308 aa	Known RBP	11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	OGDHL	Q9ULD0	1010 aa		11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	NOB1	Q9ULX3	412 aa	Known RBP	11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	STXBP5L	Q9Y2K9	1186 aa		11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	PDS5A	Q29RF7	1337 aa	Known RBP	11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.99	□□□□□ -0.49
PTPN21-204	ENST00000554178	ZNF236	Q9UL36	1845 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178		E9PSI1	815 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	SRGAP3	O43295	1099 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	TBC1D12	O60347	775 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	CACNB2	Q08289	660 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	PDE3A	Q14432	1141 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	LRIT3	Q3SXY7	679 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	GORAB	Q5T7V8	394 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	MAP3K21	Q5TCX8	1036 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	WDR78	Q5VTH9	848 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	SPATA5	Q8NB90	893 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	P2RX7	Q99572	595 aa	Known RBP	11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	NUDT12	Q9BQG2	462 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	AS3MT	Q9HBK9	375 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	CWC22	Q9HCG8	908 aa	Known RBP	11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	COPRS	Q9NQ92	184 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	SNRK	Q9NRH2	765 aa		11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
PTPN21-204	ENST00000554178	TMOD4	Q9NZQ9	345 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms