RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 KCT2Q8NC54 265 aa8.24□□□□□ -1.09
ATXN3-218ENST00000553309 F6X3S4 739 aa8.23□□□□□ -1.09
ATXN3-218ENST00000553309 WNT11O96014 354 aa8.23□□□□□ -1.09
ATXN3-218ENST00000553309 MSMPQ1L6U9 139 aa8.23□□□□□ -1.09
ATXN3-218ENST00000553309 WIPI1Q5MNZ9 446 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-218ENST00000553309 TOP6BLQ8N6T0 577 aa8.23□□□□□ -1.09
ATXN3-218ENST00000553309 PHC3Q8NDX5 983 aa8.23□□□□□ -1.09
ATXN3-218ENST00000553309 WNT10AQ9GZT5 417 aa8.23□□□□□ -1.09
ATXN3-218ENST00000553309 ZC3H7BQ9UGR2 993 aaKnown RBP8.23□□□□□ -1.09
ATXN3-218ENST00000553309 TTBK1Q5TCY1 1321 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-218ENST00000553309 GFRA2O00451 464 aa8.22□□□□□ -1.09
ATXN3-218ENST00000553309 HSPA2P54652 639 aa8.22□□□□□ -1.09
ATXN3-218ENST00000553309 ETF1P62495 437 aaKnown RBP8.22□□□□□ -1.09
ATXN3-218ENST00000553309 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
ATXN3-218ENST00000553309 PCF11O94913 1555 aaKnown RBP8.22□□□□□ -1.09
ATXN3-218ENST00000553309 KIF21BO75037 1637 aa8.21□□□□□ -1.09
ATXN3-218ENST00000553309 ABCA10Q8WWZ4 1543 aa8.21□□□□□ -1.1
ATXN3-218ENST00000553309 TRIM26Q12899 539 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-218ENST00000553309 RSRP1Q9BUV0 290 aa8.21□□□□□ -1.1
ATXN3-218ENST00000553309 BCL11AQ9H165 835 aa8.21□□□□□ -1.1
ATXN3-218ENST00000553309 PRDM10Q9NQV6 1147 aa8.21□□□□□ -1.1
ATXN3-218ENST00000553309 BSDC1Q9NW68 430 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-218ENST00000553309 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
ATXN3-218ENST00000553309 ASXL2Q76L83 1435 aa8.2□□□□□ -1.1
ATXN3-218ENST00000553309 PTPRMP28827 1452 aa8.2□□□□□ -1.1
ATXN3-218ENST00000553309 MINDY4BA8MYZ0 360 aa8.2□□□□□ -1.1
ATXN3-218ENST00000553309 PF4P02776 101 aa8.2□□□□□ -1.1
ATXN3-218ENST00000553309 ZNF16P17020 682 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-218ENST00000553309 GBP2P32456 591 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-218ENST00000553309 CAMK2GQ13555 558 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-218ENST00000553309 FAM181AQ8N9Y4 354 aa8.2□□□□□ -1.1
ATXN3-218ENST00000553309 FBRSQ9HAH7 460 aa8.2□□□□□ -1.1
ATXN3-218ENST00000553309 CCDC39Q9UFE4 941 aa8.2□□□□□ -1.1
ATXN3-218ENST00000553309 LRIG2O94898 1065 aa8.19□□□□□ -1.1
ATXN3-218ENST00000553309 GRK4P32298 578 aa8.19□□□□□ -1.1
ATXN3-218ENST00000553309 GP2P55259 537 aaKnown RBP8.19□□□□□ -1.1
ATXN3-218ENST00000553309 LMNB2Q03252 620 aa8.19□□□□□ -1.1
ATXN3-218ENST00000553309 MRPL58Q14197 206 aaKnown RBP8.19□□□□□ -1.1
ATXN3-218ENST00000553309 DIEXFQ68CQ4 756 aaKnown RBP8.19□□□□□ -1.1
ATXN3-218ENST00000553309 CCDC84Q86UT8 332 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-218ENST00000553309 HID1Q8IV36 788 aa8.19□□□□□ -1.1
ATXN3-218ENST00000553309 TMEM74Q96NL1 305 aa8.19□□□□□ -1.1
ATXN3-218ENST00000553309 ANGEL1Q9UNK9 670 aaKnown RBP8.19□□□□□ -1.1
ATXN3-218ENST00000553309 GLI2P10070 1586 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 PRNPP04156 253 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 RPL6Q02878 288 aaKnown RBP8.18□□□□□ -1.1
ATXN3-218ENST00000553309 PWP1Q13610 501 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 SLBPQ14493 270 aaKnown RBP eCLIP8.18□□□□□ -1.1
ATXN3-218ENST00000553309 NKG7Q16617 165 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-218ENST00000553309 ARHGAP27Q6ZUM4 889 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 ARMCX6Q7L4S7 300 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 FAM214BQ7L5A3 538 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 FOXQ1Q9C009 403 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 OAS3Q9Y6K5 1087 aaKnown RBP8.18□□□□□ -1.1
ATXN3-218ENST00000553309 RUSC2Q8N2Y8 1516 aa8.18□□□□□ -1.1
ATXN3-218ENST00000553309 HEXIM2Q96MH2 286 aaKnown RBP8.17□□□□□ -1.1
ATXN3-218ENST00000553309 OXCT1P55809 520 aa8.16□□□□□ -1.1
ATXN3-218ENST00000553309 PLD6Q8N2A8 252 aaKnown RBP8.16□□□□□ -1.1
ATXN3-218ENST00000553309 NETO1Q8TDF5 533 aa8.16□□□□□ -1.1
ATXN3-218ENST00000553309 COPRSQ9NQ92 184 aa8.16□□□□□ -1.1
ATXN3-218ENST00000553309 GTF2IRD1Q9UHL9 959 aa8.16□□□□□ -1.1
ATXN3-218ENST00000553309 PLB1Q6P1J6 1458 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 TEX14Q8IWB6 1497 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 FAM221AA4D161 298 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 BPNT1O95861 308 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 EOMESO95936 686 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 F13A1P00488 732 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 PGRP06401 933 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 CAP2P40123 477 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 FAM160A1Q05DH4 1040 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 PDE4BQ07343 736 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 VSIG10LQ86VR7 867 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 MFSD2AQ8NA29 543 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 GATAD2BQ8WXI9 593 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 RHOVQ96L33 236 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 FBXL18Q96ME1 805 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 MKNK2Q9HBH9 465 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 KBTBD4Q9NVX7 518 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 U3KQE9 123 aa8.15□□□□□ -1.1
ATXN3-218ENST00000553309 MAP3K4Q9Y6R4 1608 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 IGF2BP3O00425 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
ATXN3-218ENST00000553309 CILPO75339 1184 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 SLITRK5O94991 958 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 CST3P01034 146 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-218ENST00000553309 BNIP3Q12983 259 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 ERMP1Q7Z2K6 904 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 TP53INP2Q8IXH6 220 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 GOLM1Q8NBJ4 401 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 TMEM87AQ8NBN3 555 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 RIN3Q8TB24 985 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 XAGE3Q8WTP9 111 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 TJP2Q9UDY2 1190 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 GGT7Q9UJ14 662 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 PLAGL2Q9UPG8 496 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 SLC5A6Q9Y289 635 aa8.14□□□□□ -1.11
ATXN3-218ENST00000553309 EPRSP07814 1512 aaKnown RBP8.13□□□□□ -1.11
ATXN3-218ENST00000553309 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
ATXN3-218ENST00000553309 SNAP47Q5SQN1 464 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 445.3 ms