RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ZHX2Q9Y6X8 837 aa12.22□□□□□ -0.45
TRAFD1-208ENST00000552890 PDE4AP27815 886 aa12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 GABPAQ06546 454 aa12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 CCDC178Q5BJE1 867 aa12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 CTR9Q6PD62 1173 aa12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 CWC27Q6UX04 472 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 GTF3C2Q8WUA4 911 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 CLMNQ96JQ2 1002 aa12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 KANSL2Q9H9L4 492 aa12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 TMOD4Q9NZQ9 345 aa12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 ANAPC4Q9UJX5 808 aa12.21□□□□□ -0.45
TRAFD1-208ENST00000552890 ROBO3Q96MS0 1386 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 MINDY4BA8MYZ0 360 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 USP17L10C9JJH3 530 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 NMIQ13287 307 aaPredicted RBP12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 CCL15Q16663 113 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 IMMTQ16891 758 aaKnown RBP12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 ANKRD23Q86SG2 305 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 ZFYVE28Q9HCC9 887 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 ZBTB21Q9ULJ3 1066 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 AFG3L2Q9Y4W6 797 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 CEP350Q5VT06 3117 aa12.2□□□□□ -0.46
TRAFD1-208ENST00000552890 THSD7BQ9C0I4 1608 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 M0R2C6 588 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 MPHOSPH10O00566 681 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 IRF6O14896 467 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 PRKAB2O43741 272 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 AOC2O75106 756 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 HSPD1P10809 573 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 CDK8P49336 464 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 PLCD1P51178 756 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 IFNL1Q8IU54 200 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 CDAN1Q8IWY9 1227 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 LPAR1Q92633 364 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 PARK7Q99497 189 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 FEZ1Q99689 392 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 PRDM10Q9NQV6 1147 aa12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
TRAFD1-208ENST00000552890 A0A0D9SFI3 127 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 A0A0G2JLL6 359 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 ZNF213O14771 459 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 EPB41L2O43491 1005 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 GH2P01242 217 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 CHMLP26374 656 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 SHMT1P34896 483 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 BACE1P56817 501 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 PPARAQ07869 468 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 TRDNQ13061 729 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 RAB3GAP1Q15042 981 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 RNF20Q5VTR2 975 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 PRRT2Q7Z6L0 340 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 FAM227BQ96M60 508 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 NAV1Q8NEY1 1877 aa12.18□□□□□ -0.46
TRAFD1-208ENST00000552890 CDK5RAP2Q96SN8 1893 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 ORC4O43929 436 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 CDC45O75419 566 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 FGAP02671 866 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 TSPY3P0CV98 308 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 TSPY8P0CW00 308 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 HSPA1AP0DMV8 641 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 HSPA1BP0DMV9 641 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 GSPT1P15170 499 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 OSBPP22059 807 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 SPP2Q13103 211 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 KIF22Q14807 665 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 KIAA1683Q9H0B3 1180 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 RNF186Q9NXI6 227 aa12.17□□□□□ -0.46
TRAFD1-208ENST00000552890 TRIM75PA6NK02 468 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 TRPA1O75762 1119 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 REC8O95072 547 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 GNRH1P01148 92 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 GCLCP48506 637 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 TAF1CQ15572 869 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 ESR2Q92731 530 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 SEC62Q99442 399 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 KRT23Q9C075 422 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 DNAJC18Q9H819 358 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 FZD1Q9UP38 647 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 AGTPBP1Q9UPW5 1226 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
TRAFD1-208ENST00000552890 TSPY2A6NKD2 308 aa12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 SGSM2O43147 1006 aa12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 IRX3P78415 501 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 ICA1Q05084 483 aa12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 MKRN3Q13064 507 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 PKN2Q16513 984 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 GADL1Q6ZQY3 521 aa12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 C12orf42Q96LP6 360 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms