RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 C8orf34Q49A92 452 aa11.83□□□□□ -0.52
LETMD1-234ENST00000552645 C12orf60Q5U649 245 aa11.83□□□□□ -0.52
LETMD1-234ENST00000552645 SPRYD7Q5W111 196 aa11.83□□□□□ -0.52
LETMD1-234ENST00000552645 GIMAP6Q6P9H5 292 aa11.83□□□□□ -0.52
LETMD1-234ENST00000552645 CCDC84Q86UT8 332 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-234ENST00000552645 SCYL3Q8IZE3 742 aa11.83□□□□□ -0.52
LETMD1-234ENST00000552645 EHD4Q9H223 541 aa11.83□□□□□ -0.52
LETMD1-234ENST00000552645 UNCXA6NJT0 531 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 GJA5P36382 358 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 CAP2P40123 477 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 KIF23Q02241 960 aaPredicted RBP11.82□□□□□ -0.52
LETMD1-234ENST00000552645 RRP1BQ14684 758 aaKnown RBP11.82□□□□□ -0.52
LETMD1-234ENST00000552645 CERKLQ49MI3 558 aaPredicted RBP11.82□□□□□ -0.52
LETMD1-234ENST00000552645 ERO1BQ86YB8 467 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 IL25Q9H293 177 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 SPDYE5A6NIY4 337 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 FOXP2O15409 715 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 GH2P01242 217 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 SHMT1P34896 483 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 RAB3GAP1Q15042 981 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 SBK1Q52WX2 424 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 CASC1Q6TDU7 716 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 METTL16Q86W50 562 aaKnown RBP11.82□□□□□ -0.52
LETMD1-234ENST00000552645 MKNK2Q9HBH9 465 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 ZHX2Q9Y6X8 837 aa11.82□□□□□ -0.52
LETMD1-234ENST00000552645 PHIPQ8WWQ0 1821 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 TRIM75PA6NK02 468 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 IRF6O14896 467 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 PRDM1O75626 825 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 FGAP02671 866 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 SLC3A2P08195 630 aaKnown RBP11.81□□□□□ -0.52
LETMD1-234ENST00000552645 ZBTB48P10074 688 aaPredicted RBP11.81□□□□□ -0.52
LETMD1-234ENST00000552645 PTPRAP18433 802 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 MAP2K2P36507 400 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 CDK8P49336 464 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 HAND2P61296 217 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 CTDSPL2Q05D32 466 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 GABPAQ06546 454 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 ABCB5Q2M3G0 1257 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 NOL9Q5SY16 702 aaKnown RBP11.81□□□□□ -0.52
LETMD1-234ENST00000552645 SWAP70Q9UH65 585 aa11.81□□□□□ -0.52
LETMD1-234ENST00000552645 RAD50Q92878 1312 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 CDC45O75419 566 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 ASNSP08243 561 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 JAG1P78504 1218 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 PPATQ06203 517 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 PPARAQ07869 468 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 TATDN1Q6P1N9 297 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 C16orf86Q6ZW13 317 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 NAP1L5Q96NT1 182 aaPredicted RBP11.8□□□□□ -0.52
LETMD1-234ENST00000552645 BEGAINQ9BUH8 593 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 CABP5Q9NP86 173 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 TOMM22Q9NS69 142 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 ZBTB21Q9ULJ3 1066 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 THSD7BQ9C0I4 1608 aa11.8□□□□□ -0.52
LETMD1-234ENST00000552645 SGSM2O43147 1006 aa11.79□□□□□ -0.52
LETMD1-234ENST00000552645 PPIL2Q13356 520 aa11.79□□□□□ -0.52
LETMD1-234ENST00000552645 KIAA1211Q6ZU35 1233 aa11.79□□□□□ -0.52
LETMD1-234ENST00000552645 PTPRFP10586 1907 aa11.79□□□□□ -0.52
LETMD1-234ENST00000552645 LAMA4Q16363 1823 aa11.79□□□□□ -0.52
LETMD1-234ENST00000552645 CCL15-CCL14A0A0B4J2E2 113 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 FSD2A1L4K1 749 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 MANSC4A6NHS7 340 aaPredicted RBP11.78□□□□□ -0.52
LETMD1-234ENST00000552645 USP17L5A8MUK1 530 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 AKR1B1P15121 316 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 GTF2A2P52657 109 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
LETMD1-234ENST00000552645 PTH1RQ03431 593 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 PDE4BQ07343 736 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 SREBF2Q12772 1141 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 SPP2Q13103 211 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 SNAPC2Q13487 334 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 SEPT2Q15019 361 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ALX1Q15699 326 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 CCL15Q16663 113 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 RRP12Q5JTH9 1297 aaKnown RBP11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ESYT1Q9BSJ8 1104 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ZNF287Q9HBT7 754 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 INCENPQ9NQS7 918 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ROBO3Q96MS0 1386 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ZNF213O14771 459 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ATP2B2Q01814 1243 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ZYXQ15942 572 aaKnown RBP11.78□□□□□ -0.52
LETMD1-234ENST00000552645 GADL1Q6ZQY3 521 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ZNF444Q8N0Y2 327 aaPredicted RBP11.78□□□□□ -0.52
LETMD1-234ENST00000552645 JMYQ8N9B5 988 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ZNF280CQ8ND82 737 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 FEZ1Q99689 392 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 DSCC1Q9BVC3 393 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 AS3MTQ9HBK9 375 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 ANO2Q9NQ90 1003 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 AFG3L2Q9Y4W6 797 aa11.78□□□□□ -0.52
LETMD1-234ENST00000552645 TRPA1O75762 1119 aa11.77□□□□□ -0.53
LETMD1-234ENST00000552645 TPM2P07951 284 aa11.77□□□□□ -0.53
LETMD1-234ENST00000552645 CETPP11597 493 aa11.77□□□□□ -0.53
LETMD1-234ENST00000552645 SLC4A3P48751 1232 aa11.77□□□□□ -0.53
LETMD1-234ENST00000552645 MTMR2Q13614 643 aa11.77□□□□□ -0.53
LETMD1-234ENST00000552645 FAM47AQ5JRC9 791 aa11.77□□□□□ -0.53
LETMD1-234ENST00000552645 TMEM179Q6ZVK1 233 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms