RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ERLIN2O94905 339 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 SLFN13Q68D06 897 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 SYNCQ9H7C4 482 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 CBX1P83916 185 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 PPP2R5BQ15173 497 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 SPOUT1Q5T280 376 aaKnown RBP13.78□□□□□ -0.2
NR4A1-215ENST00000550557 PRDM10Q9NQV6 1147 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 CPS1P31327 1500 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 SPATA31D1Q6ZQQ2 1576 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 HARSP12081 509 aaKnown RBP13.78□□□□□ -0.2
NR4A1-215ENST00000550557 ADORA1P30542 326 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 AOC3Q16853 763 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 LRRC47Q8N1G4 583 aaKnown RBP13.78□□□□□ -0.2
NR4A1-215ENST00000550557 ATP8A2Q9NTI2 1148 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 SYT1P21579 422 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 ARHGEF16Q5VV41 709 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 IFNL3Q8IZI9 196 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
NR4A1-215ENST00000550557 DHX36Q9H2U1 1008 aaKnown RBP13.78□□□□□ -0.2
NR4A1-215ENST00000550557 MRPL11Q9Y3B7 192 aaKnown RBP13.78□□□□□ -0.2
NR4A1-215ENST00000550557 TECPR2O15040 1411 aa13.77□□□□□ -0.2
NR4A1-215ENST00000550557 TTLL11Q8NHH1 800 aa13.77□□□□□ -0.2
NR4A1-215ENST00000550557 MIGA2Q7L4E1 593 aa13.77□□□□□ -0.21
NR4A1-215ENST00000550557 ATP10DQ9P241 1426 aa13.77□□□□□ -0.21
NR4A1-215ENST00000550557 TESPA1A2RU30 521 aaPredicted RBP13.77□□□□□ -0.21
NR4A1-215ENST00000550557 TMEM232C9JQI7 657 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 KIF2AO00139 706 aaPredicted RBP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 FMNL1O95466 1100 aaPredicted RBP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 SMTNP53814 917 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 HAUS3Q68CZ6 603 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 SERPINB13Q9UIV8 391 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 SLC27A2O14975 620 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 ECE2O60344 883 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 DNM1Q05193 864 aaKnown RBP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 RC3H1Q5TC82 1133 aaKnown RBP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 CCDC169A6NNP5 214 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 CPA1P15085 419 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 CCT6AP40227 531 aaKnown RBP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 KRT26Q7Z3Y9 468 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 MCF2L2Q86YR7 1114 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 ADAMTS13Q76LX8 1427 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 COL3A1P02461 1466 aaPredicted RBP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 CEP170BQ9Y4F5 1589 aaPredicted RBP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 PDE4DQ08499 809 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 NONOQ15233 471 aaKnown RBP eCLIP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 LEKR1Q6ZMV7 388 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 EP400NLQ6ZTU2 488 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 FAM177A1Q8N128 213 aaPredicted RBP13.76□□□□□ -0.21
NR4A1-215ENST00000550557 DHX58Q96C10 678 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 MYL10Q9BUA6 226 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 GPR108Q9NPR9 543 aa13.76□□□□□ -0.21
NR4A1-215ENST00000550557 MACROD2A1Z1Q3 448 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 ARHGEF35A5YM69 484 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 ERLIN1O75477 346 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
NR4A1-215ENST00000550557 ISM2Q6H9L7 571 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 SPICE1Q8N0Z3 855 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 PNMA3Q9UL41 463 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 ARID4AP29374 1257 aaPredicted RBP13.75□□□□□ -0.21
NR4A1-215ENST00000550557 GAS2L3Q86XJ1 694 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 PI4KBQ9UBF8 816 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 PSMA7O14818 248 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 TNNT1P13805 278 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 UBE3CQ15386 1083 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 PTPN14Q15678 1187 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 PIK3AP1Q6ZUJ8 805 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 DPH6Q7L8W6 267 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 KRT25Q7Z3Z0 450 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 CCPG1Q9ULG6 757 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
NR4A1-215ENST00000550557 GDF11O95390 407 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 ZNF174Q15697 407 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 C16orf45Q96MC5 204 aaPredicted RBP13.75□□□□□ -0.21
NR4A1-215ENST00000550557 SPAG5Q96R06 1193 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 PPP1R9BQ96SB3 815 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 PLIN2Q99541 437 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
NR4A1-215ENST00000550557 SPTLC2O15270 562 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 BRD1O95696 1058 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 TOP1P11387 765 aaKnown RBP13.74□□□□□ -0.21
NR4A1-215ENST00000550557 DIXDC1Q155Q3 683 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 NUP88Q99567 741 aaPredicted RBP13.74□□□□□ -0.21
NR4A1-215ENST00000550557 HAUS7Q99871 368 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 CCNT1O60563 726 aaKnown RBP13.74□□□□□ -0.21
NR4A1-215ENST00000550557 SASH1O94885 1247 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 NEFHP12036 1026 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 RPS6KB1P23443 525 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 PNMA1Q8ND90 353 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 CCDC172P0C7W6 258 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 NCAPH2Q6IBW4 605 aa13.74□□□□□ -0.21
NR4A1-215ENST00000550557 REXO1Q8N1G1 1221 aaKnown RBP13.74□□□□□ -0.21
NR4A1-215ENST00000550557 AP5M1Q9H0R1 490 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms