RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 OTUD5Q96G74 571 aa17.28■□□□□ 0.36
DDX54-203ENST00000546869 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
DDX54-203ENST00000546869 NAPBQ9H115 298 aa17.28■□□□□ 0.36
DDX54-203ENST00000546869 ZHX2Q9Y6X8 837 aa17.28■□□□□ 0.36
DDX54-203ENST00000546869 NAV1Q8NEY1 1877 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 CYP2D7A0A087X1C5 515 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 USP17L5A8MUK1 530 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 FGAP02671 866 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 CETPP11597 493 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 CDK8P49336 464 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 EVX2Q03828 476 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 SNAPC2Q13487 334 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 VPS53Q5VIR6 699 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 SKAP1Q86WV1 359 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 WDR18Q9BV38 432 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 DSCC1Q9BVC3 393 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 ZNF287Q9HBT7 754 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 SAGE1Q9NXZ1 904 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 ANAPC4Q9UJX5 808 aa17.27■□□□□ 0.36
DDX54-203ENST00000546869 ALDH1A1P00352 501 aa17.26■□□□□ 0.35
DDX54-203ENST00000546869 JAG1P78504 1218 aa17.26■□□□□ 0.35
DDX54-203ENST00000546869 ABCB5Q2M3G0 1257 aa17.26■□□□□ 0.35
DDX54-203ENST00000546869 BEGAINQ9BUH8 593 aa17.26■□□□□ 0.35
DDX54-203ENST00000546869 CFHR5Q9BXR6 569 aa17.26■□□□□ 0.35
DDX54-203ENST00000546869 AS3MTQ9HBK9 375 aa17.26■□□□□ 0.35
DDX54-203ENST00000546869 CABP5Q9NP86 173 aa17.26■□□□□ 0.35
DDX54-203ENST00000546869 ZBTB21Q9ULJ3 1066 aa17.26■□□□□ 0.35
DDX54-203ENST00000546869 MINDY4BA8MYZ0 360 aa17.25■□□□□ 0.35
DDX54-203ENST00000546869 SGSM2O43147 1006 aa17.25■□□□□ 0.35
DDX54-203ENST00000546869 SLC3A2P08195 630 aaKnown RBP17.25■□□□□ 0.35
DDX54-203ENST00000546869 PPARAQ07869 468 aa17.25■□□□□ 0.35
DDX54-203ENST00000546869 MKRN3Q13064 507 aaKnown RBP17.25■□□□□ 0.35
DDX54-203ENST00000546869 OTUD7BQ6GQQ9 843 aa17.25■□□□□ 0.35
DDX54-203ENST00000546869 ZNF280CQ8ND82 737 aa17.25■□□□□ 0.35
DDX54-203ENST00000546869 ZCCHC17Q9NP64 241 aaKnown RBP17.25■□□□□ 0.35
DDX54-203ENST00000546869 LAMB1P07942 1786 aa17.25■□□□□ 0.35
DDX54-203ENST00000546869 A0A0G2JLL6 359 aaPredicted RBP17.24■□□□□ 0.35
DDX54-203ENST00000546869 SMIM22K7EJ46 135 aa17.24■□□□□ 0.35
DDX54-203ENST00000546869 GDF11O95390 407 aa17.24■□□□□ 0.35
DDX54-203ENST00000546869 GH2P01242 217 aa17.24■□□□□ 0.35
DDX54-203ENST00000546869 FGRP09769 529 aa17.24■□□□□ 0.35
DDX54-203ENST00000546869 SH3D19Q5HYK7 790 aa17.24■□□□□ 0.35
DDX54-203ENST00000546869 PRRT2Q7Z6L0 340 aaPredicted RBP17.24■□□□□ 0.35
DDX54-203ENST00000546869 IFNL1Q8IU54 200 aa17.24■□□□□ 0.35
DDX54-203ENST00000546869 PTPN18Q99952 460 aa17.24■□□□□ 0.35
DDX54-203ENST00000546869 RNF186Q9NXI6 227 aa17.24■□□□□ 0.35
DDX54-203ENST00000546869 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.24■□□□□ 0.35
DDX54-203ENST00000546869 CCL15-CCL14A0A0B4J2E2 113 aa17.23■□□□□ 0.35
DDX54-203ENST00000546869 C19orf81C9J6K1 198 aa17.23■□□□□ 0.35
DDX54-203ENST00000546869 PDE4BQ07343 736 aa17.23■□□□□ 0.35
DDX54-203ENST00000546869 CCL15Q16663 113 aa17.23■□□□□ 0.35
DDX54-203ENST00000546869 TMEM179Q6ZVK1 233 aa17.23■□□□□ 0.35
DDX54-203ENST00000546869 FASTKD5Q7L8L6 764 aaKnown RBP17.23■□□□□ 0.35
DDX54-203ENST00000546869 SLC44A5Q8NCS7 719 aa17.23■□□□□ 0.35
DDX54-203ENST00000546869 BRI3BPQ8WY22 251 aa17.23■□□□□ 0.35
DDX54-203ENST00000546869 IL25Q9H293 177 aa17.23■□□□□ 0.35
DDX54-203ENST00000546869 DOCK1Q14185 1865 aa17.22■□□□□ 0.35
DDX54-203ENST00000546869 BAZ2AQ9UIF9 1905 aaKnown RBP17.22■□□□□ 0.35
DDX54-203ENST00000546869 HSPA1AP0DMV8 641 aaKnown RBP17.22■□□□□ 0.35
DDX54-203ENST00000546869 HSPA1BP0DMV9 641 aaKnown RBP17.22■□□□□ 0.35
DDX54-203ENST00000546869 PCP11498 1178 aaKnown RBP17.22■□□□□ 0.35
DDX54-203ENST00000546869 RASA1P20936 1047 aa17.22■□□□□ 0.35
DDX54-203ENST00000546869 GUCY1A2P33402 732 aa17.22■□□□□ 0.35
DDX54-203ENST00000546869 NT5C2P49902 561 aa17.22■□□□□ 0.35
DDX54-203ENST00000546869 SPP2Q13103 211 aa17.22■□□□□ 0.35
DDX54-203ENST00000546869 MOGSQ13724 837 aa17.22■□□□□ 0.35
DDX54-203ENST00000546869 ANKRD23Q86SG2 305 aa17.22■□□□□ 0.35
DDX54-203ENST00000546869 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
DDX54-203ENST00000546869 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
DDX54-203ENST00000546869 USP17L10C9JJH3 530 aa17.21■□□□□ 0.35
DDX54-203ENST00000546869 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
DDX54-203ENST00000546869 BACE1P56817 501 aa17.21■□□□□ 0.35
DDX54-203ENST00000546869 PROCA1Q8NCQ7 364 aaPredicted RBP17.21■□□□□ 0.35
DDX54-203ENST00000546869 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.21■□□□□ 0.35
DDX54-203ENST00000546869 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
DDX54-203ENST00000546869 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
DDX54-203ENST00000546869 TRIM75PA6NK02 468 aa17.2■□□□□ 0.34
DDX54-203ENST00000546869 ORC4O43929 436 aa17.2■□□□□ 0.34
DDX54-203ENST00000546869 AKR1B1P15121 316 aa17.2■□□□□ 0.34
DDX54-203ENST00000546869 RAB3GAP1Q15042 981 aa17.2■□□□□ 0.34
DDX54-203ENST00000546869 SHROOM1Q2M3G4 852 aaPredicted RBP17.2■□□□□ 0.34
DDX54-203ENST00000546869 NOM1Q5C9Z4 860 aaKnown RBP17.2■□□□□ 0.34
DDX54-203ENST00000546869 CASC1Q6TDU7 716 aa17.2■□□□□ 0.34
DDX54-203ENST00000546869 ZNF444Q8N0Y2 327 aaPredicted RBP17.2■□□□□ 0.34
DDX54-203ENST00000546869 KANSL2Q9H9L4 492 aa17.2■□□□□ 0.34
DDX54-203ENST00000546869 BTBD19C9JJ37 291 aa17.19■□□□□ 0.34
DDX54-203ENST00000546869 MPHOSPH10O00566 681 aaKnown RBP17.19■□□□□ 0.34
DDX54-203ENST00000546869 ZNF213O14771 459 aa17.19■□□□□ 0.34
DDX54-203ENST00000546869 CDC45O75419 566 aa17.19■□□□□ 0.34
DDX54-203ENST00000546869 TRPA1O75762 1119 aa17.19■□□□□ 0.34
DDX54-203ENST00000546869 CTCFP49711 727 aaPredicted RBP17.19■□□□□ 0.34
DDX54-203ENST00000546869 SEPT2Q15019 361 aa17.19■□□□□ 0.34
DDX54-203ENST00000546869 GPAT2Q6NUI2 795 aa17.19■□□□□ 0.34
DDX54-203ENST00000546869 CCDC84Q86UT8 332 aaPredicted RBP17.19■□□□□ 0.34
DDX54-203ENST00000546869 MAP4K1Q92918 833 aa17.19■□□□□ 0.34
DDX54-203ENST00000546869 ESYT1Q9BSJ8 1104 aa17.19■□□□□ 0.34
DDX54-203ENST00000546869 KIAA1683Q9H0B3 1180 aa17.19■□□□□ 0.34
DDX54-203ENST00000546869 FOXN1O15353 648 aa17.18■□□□□ 0.34
DDX54-203ENST00000546869 USP14P54578 494 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms