RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 GINM1Q9NU53 330 aa20.07■□□□□ 0.8
LTBR-215ENST00000546296 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.07■□□□□ 0.8
LTBR-215ENST00000546296 NAV1Q8NEY1 1877 aa20.07■□□□□ 0.8
LTBR-215ENST00000546296 CCL15-CCL14A0A0B4J2E2 113 aa20.06■□□□□ 0.8
LTBR-215ENST00000546296 USP17L5A8MUK1 530 aa20.06■□□□□ 0.8
LTBR-215ENST00000546296 SMIM22K7EJ46 135 aa20.06■□□□□ 0.8
LTBR-215ENST00000546296 MPHOSPH10O00566 681 aaKnown RBP20.06■□□□□ 0.8
LTBR-215ENST00000546296 GH2P01242 217 aa20.06■□□□□ 0.8
LTBR-215ENST00000546296 SLC3A2P08195 630 aaKnown RBP20.06■□□□□ 0.8
LTBR-215ENST00000546296 HSPD1P10809 573 aaKnown RBP20.06■□□□□ 0.8
LTBR-215ENST00000546296 CETPP11597 493 aa20.06■□□□□ 0.8
LTBR-215ENST00000546296 CDK8P49336 464 aa20.06■□□□□ 0.8
LTBR-215ENST00000546296 CCL15Q16663 113 aa20.06■□□□□ 0.8
LTBR-215ENST00000546296 BMP2KLQ5H9B9 411 aa20.06■□□□□ 0.8
LTBR-215ENST00000546296 CCDC84Q86UT8 332 aaPredicted RBP20.06■□□□□ 0.8
LTBR-215ENST00000546296 OTOFQ9HC10 1997 aa20.06■□□□□ 0.8
LTBR-215ENST00000546296 TRIM75PA6NK02 468 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 CXCL11O14625 94 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 JAG1P78504 1218 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 ALX1Q15699 326 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 OTUD7BQ6GQQ9 843 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 C16orf86Q6ZW13 317 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 MS4A4AQ96JQ5 239 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 MKNK2Q9HBH9 465 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 AS3MTQ9HBK9 375 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 ZBTB21Q9ULJ3 1066 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 AFG3L2Q9Y4W6 797 aa20.05■□□□□ 0.8
LTBR-215ENST00000546296 FOXP2O15409 715 aa20.04■□□□□ 0.8
LTBR-215ENST00000546296 CA12O43570 354 aa20.04■□□□□ 0.8
LTBR-215ENST00000546296 RAB3GAP1Q15042 981 aa20.04■□□□□ 0.8
LTBR-215ENST00000546296 SHROOM1Q2M3G4 852 aaPredicted RBP20.04■□□□□ 0.8
LTBR-215ENST00000546296 TBC1D2Q9BYX2 928 aa20.04■□□□□ 0.8
LTBR-215ENST00000546296 ZNF287Q9HBT7 754 aa20.04■□□□□ 0.8
LTBR-215ENST00000546296 KCNH4Q9UQ05 1017 aa20.04■□□□□ 0.8
LTBR-215ENST00000546296 TESPA1A2RU30 521 aaPredicted RBP20.03■□□□□ 0.8
LTBR-215ENST00000546296 TRPA1O75762 1119 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 FGAP02671 866 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 PPARAQ07869 468 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 SPP2Q13103 211 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 IFNL1Q8IU54 200 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 ZNF280CQ8ND82 737 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 BRI3BPQ8WY22 251 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 CCDC17Q96LX7 622 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 RNF186Q9NXI6 227 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 SIPA1L1O43166 1804 aa20.03■□□□□ 0.8
LTBR-215ENST00000546296 RAD50Q92878 1312 aa20.02■□□□□ 0.8
LTBR-215ENST00000546296 DDX60LQ5H9U9 1706 aaKnown RBP20.02■□□□□ 0.8
LTBR-215ENST00000546296 PDE4BQ07343 736 aa20.02■□□□□ 0.8
LTBR-215ENST00000546296 THSD7BQ9C0I4 1608 aa20.02■□□□□ 0.79
LTBR-215ENST00000546296 ALDH1A1P00352 501 aa20.01■□□□□ 0.79
LTBR-215ENST00000546296 AKR1B1P15121 316 aa20.01■□□□□ 0.79
LTBR-215ENST00000546296 CTDSPL2Q05D32 466 aa20.01■□□□□ 0.79
LTBR-215ENST00000546296 CASC1Q6TDU7 716 aa20.01■□□□□ 0.79
LTBR-215ENST00000546296 GADL1Q6ZQY3 521 aa20.01■□□□□ 0.79
LTBR-215ENST00000546296 FASTKD5Q7L8L6 764 aaKnown RBP20.01■□□□□ 0.79
LTBR-215ENST00000546296 ZNF444Q8N0Y2 327 aaPredicted RBP20.01■□□□□ 0.79
LTBR-215ENST00000546296 PTPN18Q99952 460 aa20.01■□□□□ 0.79
LTBR-215ENST00000546296 WDR18Q9BV38 432 aa20.01■□□□□ 0.79
LTBR-215ENST00000546296 BAZ2AQ9UIF9 1905 aaKnown RBP20.01■□□□□ 0.79
LTBR-215ENST00000546296 IGF2BP3O00425 579 aaKnown RBP eCLIP20■□□□□ 0.79
LTBR-215ENST00000546296 FOXN1O15353 648 aa20■□□□□ 0.79
LTBR-215ENST00000546296 PRDM1O75626 825 aa20■□□□□ 0.79
LTBR-215ENST00000546296 SEPT2Q15019 361 aa20■□□□□ 0.79
LTBR-215ENST00000546296 TMEM179Q6ZVK1 233 aa20■□□□□ 0.79
LTBR-215ENST00000546296 DSCC1Q9BVC3 393 aa20■□□□□ 0.79
LTBR-215ENST00000546296 SAGE1Q9NXZ1 904 aa20■□□□□ 0.79
LTBR-215ENST00000546296 CTNNA3Q9UI47 895 aa20■□□□□ 0.79
LTBR-215ENST00000546296 TSKSQ9UJT2 592 aa20■□□□□ 0.79
LTBR-215ENST00000546296 PCNTO95613 3336 aa19.99■□□□□ 0.79
LTBR-215ENST00000546296 ROBO3Q96MS0 1386 aa19.99■□□□□ 0.79
LTBR-215ENST00000546296 A0A0G2JLL6 359 aaPredicted RBP19.99■□□□□ 0.79
LTBR-215ENST00000546296 SGSM2O43147 1006 aa19.99■□□□□ 0.79
LTBR-215ENST00000546296 CTCFP49711 727 aaPredicted RBP19.99■□□□□ 0.79
LTBR-215ENST00000546296 PRRT2Q7Z6L0 340 aaPredicted RBP19.99■□□□□ 0.79
LTBR-215ENST00000546296 FEZ1Q99689 392 aa19.99■□□□□ 0.79
LTBR-215ENST00000546296 IL25Q9H293 177 aa19.99■□□□□ 0.79
LTBR-215ENST00000546296 ANAPC4Q9UJX5 808 aa19.99■□□□□ 0.79
LTBR-215ENST00000546296 DOCK1Q14185 1865 aa19.99■□□□□ 0.79
LTBR-215ENST00000546296 BTBD19C9JJ37 291 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 USP17L10C9JJH3 530 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 ZNF213O14771 459 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 CDC45O75419 566 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 TBC1D8O95759 1140 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 RASA1P20936 1047 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 HAND2P61296 217 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 MTMR2Q13614 643 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 KIAA1211Q6ZU35 1233 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 FAM43AQ8N2R8 423 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 TMOD4Q9NZQ9 345 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 ZMYM6O95789 1325 aa19.98■□□□□ 0.79
LTBR-215ENST00000546296 C19orf81C9J6K1 198 aa19.97■□□□□ 0.79
LTBR-215ENST00000546296 GUCY1A2P33402 732 aa19.97■□□□□ 0.79
LTBR-215ENST00000546296 HMGCS2P54868 508 aa19.97■□□□□ 0.79
LTBR-215ENST00000546296 BACE1P56817 501 aa19.97■□□□□ 0.79
LTBR-215ENST00000546296 ANKRD23Q86SG2 305 aa19.97■□□□□ 0.79
LTBR-215ENST00000546296 TOMM22Q9NS69 142 aa19.97■□□□□ 0.79
LTBR-215ENST00000546296 PDHXO00330 501 aa19.96■□□□□ 0.79
LTBR-215ENST00000546296 ATP2B2Q01814 1243 aa19.96■□□□□ 0.79
LTBR-215ENST00000546296 MOGSQ13724 837 aa19.96■□□□□ 0.79
LTBR-215ENST00000546296 IMMTQ16891 758 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms