RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 MAPKAPK5Q8IW41 473 aa15.43■□□□□ 0.06
COPS7A-221ENST00000546229 TGFBRAP1Q8WUH2 860 aa15.43■□□□□ 0.06
COPS7A-221ENST00000546229 TRIB2Q92519 343 aa15.43■□□□□ 0.06
COPS7A-221ENST00000546229 HTATIP2Q9BUP3 242 aa15.43■□□□□ 0.06
COPS7A-221ENST00000546229 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.43■□□□□ 0.06
COPS7A-221ENST00000546229 ZBTB21Q9ULJ3 1066 aa15.43■□□□□ 0.06
COPS7A-221ENST00000546229 HMGCRP04035 888 aa15.42■□□□□ 0.06
COPS7A-221ENST00000546229 ASNSP08243 561 aa15.42■□□□□ 0.06
COPS7A-221ENST00000546229 CAPN2P17655 700 aa15.42■□□□□ 0.06
COPS7A-221ENST00000546229 DYNLL1P63167 89 aaKnown RBP15.42■□□□□ 0.06
COPS7A-221ENST00000546229 ZKSCAN2Q63HK3 967 aa15.42■□□□□ 0.06
COPS7A-221ENST00000546229 USP6NLQ92738 828 aa15.42■□□□□ 0.06
COPS7A-221ENST00000546229 DPF3Q92784 378 aa15.42■□□□□ 0.06
COPS7A-221ENST00000546229 COA7Q96BR5 231 aa15.42■□□□□ 0.06
COPS7A-221ENST00000546229 EAF2Q96CJ1 260 aaPredicted RBP15.42■□□□□ 0.06
COPS7A-221ENST00000546229 PALD1Q9ULE6 856 aa15.42■□□□□ 0.06
COPS7A-221ENST00000546229 RLFQ13129 1914 aa15.41■□□□□ 0.06
COPS7A-221ENST00000546229 GDF11O95390 407 aa15.41■□□□□ 0.06
COPS7A-221ENST00000546229 TTC39AQ5SRH9 613 aa15.41■□□□□ 0.06
COPS7A-221ENST00000546229 P2RX7Q99572 595 aaKnown RBP15.41■□□□□ 0.06
COPS7A-221ENST00000546229 AS3MTQ9HBK9 375 aa15.41■□□□□ 0.06
COPS7A-221ENST00000546229 SOX1O00570 391 aaPredicted RBP15.4■□□□□ 0.06
COPS7A-221ENST00000546229 BAG3O95817 575 aa15.4■□□□□ 0.06
COPS7A-221ENST00000546229 PLCG2P16885 1265 aa15.4■□□□□ 0.06
COPS7A-221ENST00000546229 HERVK_113P62684 666 aa15.4■□□□□ 0.06
COPS7A-221ENST00000546229 PABPC4Q13310 644 aaKnown RBP eCLIP15.4■□□□□ 0.06
COPS7A-221ENST00000546229 PAWRQ96IZ0 340 aaKnown RBP15.4■□□□□ 0.06
COPS7A-221ENST00000546229 C12orf42Q96LP6 360 aa15.4■□□□□ 0.06
COPS7A-221ENST00000546229 EMILIN3Q9NT22 766 aa15.4■□□□□ 0.06
COPS7A-221ENST00000546229 GINM1Q9NU53 330 aa15.4■□□□□ 0.06
COPS7A-221ENST00000546229 RBPJLQ9UBG7 517 aa15.4■□□□□ 0.06
COPS7A-221ENST00000546229 NDUFB9Q9Y6M9 179 aa15.4■□□□□ 0.06
COPS7A-221ENST00000546229 ZNF236Q9UL36 1845 aa15.4■□□□□ 0.06
COPS7A-221ENST00000546229 SURF6O75683 361 aaKnown RBP15.39■□□□□ 0.05
COPS7A-221ENST00000546229 CNMDO75829 334 aa15.39■□□□□ 0.05
COPS7A-221ENST00000546229 CCDC158Q5M9N0 1113 aa15.39■□□□□ 0.05
COPS7A-221ENST00000546229 TATDN1Q6P1N9 297 aa15.39■□□□□ 0.05
COPS7A-221ENST00000546229 CEP85Q6P2H3 762 aa15.39■□□□□ 0.05
COPS7A-221ENST00000546229 FOXP4Q8IVH2 680 aaPredicted RBP15.39■□□□□ 0.05
COPS7A-221ENST00000546229 ANKLE1Q8NAG6 615 aa15.39■□□□□ 0.05
COPS7A-221ENST00000546229 PORCNQ9H237 461 aa15.39■□□□□ 0.05
COPS7A-221ENST00000546229 ANTXR1Q9H6X2 564 aa15.39■□□□□ 0.05
COPS7A-221ENST00000546229 PFASO15067 1338 aa15.39■□□□□ 0.05
COPS7A-221ENST00000546229 RPTORQ8N122 1335 aa15.39■□□□□ 0.05
COPS7A-221ENST00000546229 A0A1W2PPC1 479 aa15.38■□□□□ 0.05
COPS7A-221ENST00000546229 Q3C1V9 767 aa15.38■□□□□ 0.05
COPS7A-221ENST00000546229 MORN1Q5T089 497 aa15.38■□□□□ 0.05
COPS7A-221ENST00000546229 RIOK1Q9BRS2 568 aaKnown RBP15.38■□□□□ 0.05
COPS7A-221ENST00000546229 EHD4Q9H223 541 aa15.38■□□□□ 0.05
COPS7A-221ENST00000546229 SAP30BPQ9UHR5 308 aaKnown RBP15.38■□□□□ 0.05
COPS7A-221ENST00000546229 OGDHLQ9ULD0 1010 aa15.38■□□□□ 0.05
COPS7A-221ENST00000546229 NR2E3Q9Y5X4 410 aa15.38■□□□□ 0.05
COPS7A-221ENST00000546229 A0A0C4DFX4 3053 aa15.38■□□□□ 0.05
COPS7A-221ENST00000546229 PARP14Q460N5 1801 aa15.38■□□□□ 0.05
COPS7A-221ENST00000546229 C19orf81C9J6K1 198 aa15.37■□□□□ 0.05
COPS7A-221ENST00000546229 USP17L10C9JJH3 530 aa15.37■□□□□ 0.05
COPS7A-221ENST00000546229 IGHA2P01877 340 aa15.37■□□□□ 0.05
COPS7A-221ENST00000546229 TFRCP02786 760 aaKnown RBP15.37■□□□□ 0.05
COPS7A-221ENST00000546229 XRCC5P13010 732 aaKnown RBP15.37■□□□□ 0.05
COPS7A-221ENST00000546229 ERVK-9P63128 1117 aa15.37■□□□□ 0.05
COPS7A-221ENST00000546229 ERVK-24P63145 666 aa15.37■□□□□ 0.05
COPS7A-221ENST00000546229 EVX2Q03828 476 aa15.37■□□□□ 0.05
COPS7A-221ENST00000546229 GDF15Q99988 308 aa15.37■□□□□ 0.05
COPS7A-221ENST00000546229 NOL10Q9BSC4 688 aaKnown RBP15.37■□□□□ 0.05
COPS7A-221ENST00000546229 CCDC8Q9H0W5 538 aaPredicted RBP15.37■□□□□ 0.05
COPS7A-221ENST00000546229 TAOK2Q9UL54 1235 aa15.37■□□□□ 0.05
COPS7A-221ENST00000546229 GH2P01242 217 aa15.36■□□□□ 0.05
COPS7A-221ENST00000546229 COL6A1P12109 1028 aa15.36■□□□□ 0.05
COPS7A-221ENST00000546229 CYP7A1P22680 504 aa15.36■□□□□ 0.05
COPS7A-221ENST00000546229 GUCY1A2P33402 732 aa15.36■□□□□ 0.05
COPS7A-221ENST00000546229 IRX3P78415 501 aaPredicted RBP15.36■□□□□ 0.05
COPS7A-221ENST00000546229 MIGA1Q8NAN2 632 aa15.36■□□□□ 0.05
COPS7A-221ENST00000546229 SOCS4Q8WXH5 440 aa15.36■□□□□ 0.05
COPS7A-221ENST00000546229 EVI5O60447 810 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 PRKAR2AP13861 404 aaKnown RBP15.35■□□□□ 0.05
COPS7A-221ENST00000546229 SHMT1P34896 483 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 GABPAQ06546 454 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 OS9Q13438 667 aaPredicted RBP15.35■□□□□ 0.05
COPS7A-221ENST00000546229 CCL14Q16627 93 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 LHX8Q68G74 356 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 LBX2Q6XYB7 198 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 GPR142Q7Z601 462 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 NECAB2Q7Z6G3 386 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 GPRC5AQ8NFJ5 357 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 HMX1Q9NP08 348 aaPredicted RBP15.35■□□□□ 0.05
COPS7A-221ENST00000546229 TMOD4Q9NZQ9 345 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 UNC80Q8N2C7 3258 aa15.35■□□□□ 0.05
COPS7A-221ENST00000546229 IDH1O75874 414 aaKnown RBP15.34■□□□□ 0.05
COPS7A-221ENST00000546229 CYP2B6P20813 491 aa15.34■□□□□ 0.05
COPS7A-221ENST00000546229 MAPK4P31152 587 aa15.34■□□□□ 0.05
COPS7A-221ENST00000546229 CACNB2Q08289 660 aaPredicted RBP15.34■□□□□ 0.05
COPS7A-221ENST00000546229 CRACR2BQ8N4Y2 399 aaPredicted RBP15.34■□□□□ 0.05
COPS7A-221ENST00000546229 MAGEB6Q8N7X4 407 aa15.34■□□□□ 0.05
COPS7A-221ENST00000546229 KIAA1683Q9H0B3 1180 aa15.34■□□□□ 0.05
COPS7A-221ENST00000546229 STAP2Q9UGK3 403 aa15.34■□□□□ 0.05
COPS7A-221ENST00000546229 EXOC6BQ9Y2D4 811 aa15.34■□□□□ 0.05
COPS7A-221ENST00000546229 TCRBV5S4A2TA0A5A2 114 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 HLA-DOAP06340 250 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 VCAM1P19320 739 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms