RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 FOXP4Q8IVH2 680 aaPredicted RBP18.22■□□□□ 0.51
RTN3-214ENST00000545432 PORCNQ9H237 461 aa18.22■□□□□ 0.51
RTN3-214ENST00000545432 DNAJC18Q9H819 358 aa18.22■□□□□ 0.51
RTN3-214ENST00000545432 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.22■□□□□ 0.51
RTN3-214ENST00000545432 USP17L10C9JJH3 530 aa18.21■□□□□ 0.51
RTN3-214ENST00000545432 PEX10O60683 326 aa18.21■□□□□ 0.51
RTN3-214ENST00000545432 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
RTN3-214ENST00000545432 ARID4AP29374 1257 aaPredicted RBP18.21■□□□□ 0.51
RTN3-214ENST00000545432 RGS2P41220 211 aa18.21■□□□□ 0.51
RTN3-214ENST00000545432 SLFN5Q08AF3 891 aa18.21■□□□□ 0.51
RTN3-214ENST00000545432 TFCP2Q12800 502 aa18.21■□□□□ 0.51
RTN3-214ENST00000545432 CCL14Q16627 93 aa18.21■□□□□ 0.51
RTN3-214ENST00000545432 SPATA5Q8NB90 893 aa18.21■□□□□ 0.51
RTN3-214ENST00000545432 APBA2Q99767 749 aa18.21■□□□□ 0.51
RTN3-214ENST00000545432 TMOD4Q9NZQ9 345 aa18.21■□□□□ 0.51
RTN3-214ENST00000545432 MDM2Q00987 491 aaPredicted RBP18.2■□□□□ 0.5
RTN3-214ENST00000545432 PDE3AQ14432 1141 aa18.2■□□□□ 0.5
RTN3-214ENST00000545432 TBC1D9Q6ZT07 1266 aa18.2■□□□□ 0.5
RTN3-214ENST00000545432 PLEKHH3Q7Z736 793 aa18.2■□□□□ 0.5
RTN3-214ENST00000545432 TEX11Q8IYF3 940 aa18.2■□□□□ 0.5
RTN3-214ENST00000545432 VCANP13611 3396 aa18.19■□□□□ 0.5
RTN3-214ENST00000545432 ANP32CO43423 234 aa18.19■□□□□ 0.5
RTN3-214ENST00000545432 IGSF3O75054 1194 aa18.19■□□□□ 0.5
RTN3-214ENST00000545432 HOXC6P09630 235 aa18.19■□□□□ 0.5
RTN3-214ENST00000545432 MAP2K5Q13163 448 aa18.19■□□□□ 0.5
RTN3-214ENST00000545432 TRMT2AQ8IZ69 625 aaKnown RBP18.19■□□□□ 0.5
RTN3-214ENST00000545432 C12orf42Q96LP6 360 aa18.19■□□□□ 0.5
RTN3-214ENST00000545432 EMILIN3Q9NT22 766 aa18.19■□□□□ 0.5
RTN3-214ENST00000545432 PI16Q6UXB8 463 aa18.18■□□□□ 0.5
RTN3-214ENST00000545432 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
RTN3-214ENST00000545432 SH3RF3Q8TEJ3 882 aaPredicted RBP18.18■□□□□ 0.5
RTN3-214ENST00000545432 RABGAP1Q9Y3P9 1069 aa18.18■□□□□ 0.5
RTN3-214ENST00000545432 SIPA1L1O43166 1804 aa18.17■□□□□ 0.5
RTN3-214ENST00000545432 ATAD5Q96QE3 1844 aa18.17■□□□□ 0.5
RTN3-214ENST00000545432 CNMDO75829 334 aa18.17■□□□□ 0.5
RTN3-214ENST00000545432 LBX2Q6XYB7 198 aa18.17■□□□□ 0.5
RTN3-214ENST00000545432 EDC3Q96F86 508 aaKnown RBP18.17■□□□□ 0.5
RTN3-214ENST00000545432 MEIS3Q99687 375 aa18.17■□□□□ 0.5
RTN3-214ENST00000545432 MSCO60682 206 aa18.16■□□□□ 0.5
RTN3-214ENST00000545432 MCAMP43121 646 aa18.16■□□□□ 0.5
RTN3-214ENST00000545432 SHROOM1Q2M3G4 852 aaPredicted RBP18.16■□□□□ 0.5
RTN3-214ENST00000545432 LPAR1Q92633 364 aa18.16■□□□□ 0.5
RTN3-214ENST00000545432 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
RTN3-214ENST00000545432 SENP6Q9GZR1 1112 aaPredicted RBP18.16■□□□□ 0.5
RTN3-214ENST00000545432 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
RTN3-214ENST00000545432 FLRT1Q9NZU1 646 aa18.16■□□□□ 0.5
RTN3-214ENST00000545432 RAI14Q9P0K7 980 aa18.16■□□□□ 0.5
RTN3-214ENST00000545432 ZBTB21Q9ULJ3 1066 aa18.16■□□□□ 0.5
RTN3-214ENST00000545432 SPTBN5Q9NRC6 3674 aaKnown RBP18.16■□□□□ 0.5
RTN3-214ENST00000545432 TTC28Q96AY4 2481 aa18.15■□□□□ 0.5
RTN3-214ENST00000545432 SLC15A5A6NIM6 579 aa18.15■□□□□ 0.5
RTN3-214ENST00000545432 CT47B1P0C2W7 299 aaPredicted RBP18.15■□□□□ 0.5
RTN3-214ENST00000545432 PLCG2P16885 1265 aa18.15■□□□□ 0.5
RTN3-214ENST00000545432 PTPREP23469 700 aa18.15■□□□□ 0.5
RTN3-214ENST00000545432 USP17L2Q6R6M4 530 aa18.15■□□□□ 0.5
RTN3-214ENST00000545432 DDX20Q9UHI6 824 aaKnown RBP18.15■□□□□ 0.5
RTN3-214ENST00000545432 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
RTN3-214ENST00000545432 DNM1LO00429 736 aa18.14■□□□□ 0.49
RTN3-214ENST00000545432 SRGAP3O43295 1099 aa18.14■□□□□ 0.49
RTN3-214ENST00000545432 BAG3O95817 575 aa18.14■□□□□ 0.49
RTN3-214ENST00000545432 UQCRFS1P1P0C7P4 283 aa18.14■□□□□ 0.49
RTN3-214ENST00000545432 MFSD14CQ5VZR4 134 aa18.14■□□□□ 0.49
RTN3-214ENST00000545432 NEUROD6Q96NK8 337 aa18.14■□□□□ 0.49
RTN3-214ENST00000545432 CDX2Q99626 313 aaPredicted RBP18.14■□□□□ 0.49
RTN3-214ENST00000545432 LBHD1Q9BQE6 289 aaPredicted RBP18.14■□□□□ 0.49
RTN3-214ENST00000545432 SEMA6BQ9H3T3 888 aa18.14■□□□□ 0.49
RTN3-214ENST00000545432 FLT1P17948 1338 aa18.14■□□□□ 0.49
RTN3-214ENST00000545432 USP17L15C9J2P7 530 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 USP17L13C9JLJ4 530 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 USP17L11C9JVI0 530 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 USP17L18D6R9N7 530 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 USP17L22D6RA61 530 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 USP17L17D6RBQ6 530 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 USP17L19D6RCP7 530 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 USP17L20D6RJB6 530 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 GLRX3O76003 335 aaKnown RBP18.13■□□□□ 0.49
RTN3-214ENST00000545432 USP17L24Q0WX57 530 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 GRB14Q14449 540 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 ZNF697Q5TEC3 545 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 TATDN1Q6P1N9 297 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 CATSPERGQ6ZRH7 1159 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 TGFBRAP1Q8WUH2 860 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 ARHGAP45Q92619 1136 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 LRP2BPQ9P2M1 347 aa18.13■□□□□ 0.49
RTN3-214ENST00000545432 GNAI3P08754 354 aa18.12■□□□□ 0.49
RTN3-214ENST00000545432 CCNA1P78396 465 aa18.12■□□□□ 0.49
RTN3-214ENST00000545432 SNX17Q15036 470 aa18.12■□□□□ 0.49
RTN3-214ENST00000545432 ADGRA1Q86SQ6 560 aa18.12■□□□□ 0.49
RTN3-214ENST00000545432 MAPKAPK5Q8IW41 473 aa18.12■□□□□ 0.49
RTN3-214ENST00000545432 TRPV1Q8NER1 839 aa18.12■□□□□ 0.49
RTN3-214ENST00000545432 PAGR1Q9BTK6 254 aa18.12■□□□□ 0.49
RTN3-214ENST00000545432 GPR108Q9NPR9 543 aa18.12■□□□□ 0.49
RTN3-214ENST00000545432 AATFQ9NY61 560 aaKnown RBP eCLIP18.12■□□□□ 0.49
RTN3-214ENST00000545432 PALD1Q9ULE6 856 aa18.12■□□□□ 0.49
RTN3-214ENST00000545432 GDF11O95390 407 aa18.11■□□□□ 0.49
RTN3-214ENST00000545432 RTP1P59025 263 aa18.11■□□□□ 0.49
RTN3-214ENST00000545432 SMAD3P84022 425 aaKnown RBP18.11■□□□□ 0.49
RTN3-214ENST00000545432 SHHQ15465 462 aa18.11■□□□□ 0.49
RTN3-214ENST00000545432 C1orf53Q5VUE5 145 aa18.11■□□□□ 0.49
RTN3-214ENST00000545432 NAA16Q6N069 864 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms