RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 KCNA3P22001 575 aa15.92■□□□□ 0.14
HCFC2-202ENST00000544223 TROAPQ12815 778 aa15.92■□□□□ 0.14
HCFC2-202ENST00000544223 SBK1Q52WX2 424 aa15.92■□□□□ 0.14
HCFC2-202ENST00000544223 TBC1D22AQ8WUA7 517 aa15.92■□□□□ 0.14
HCFC2-202ENST00000544223 USP40Q9NVE5 1235 aa15.92■□□□□ 0.14
HCFC2-202ENST00000544223 STX8Q9UNK0 236 aa15.92■□□□□ 0.14
HCFC2-202ENST00000544223 KIF23Q02241 960 aaPredicted RBP15.91■□□□□ 0.14
HCFC2-202ENST00000544223 SCAF8Q9UPN6 1271 aaKnown RBP15.91■□□□□ 0.14
HCFC2-202ENST00000544223 MYH1P12882 1939 aa15.91■□□□□ 0.14
HCFC2-202ENST00000544223 MYH15Q9Y2K3 1946 aa15.91■□□□□ 0.14
HCFC2-202ENST00000544223 PSDA5PKW4 1024 aaPredicted RBP15.91■□□□□ 0.14
HCFC2-202ENST00000544223 ADAMTS3O15072 1205 aa15.91■□□□□ 0.14
HCFC2-202ENST00000544223 NR1I2O75469 434 aa15.91■□□□□ 0.14
HCFC2-202ENST00000544223 WDHD1O75717 1129 aaPredicted RBP15.91■□□□□ 0.14
HCFC2-202ENST00000544223 RAD17O75943 681 aa15.91■□□□□ 0.14
HCFC2-202ENST00000544223 HMGB2P26583 209 aaKnown RBP15.91■□□□□ 0.14
HCFC2-202ENST00000544223 CRACR2BQ8N4Y2 399 aaPredicted RBP15.91■□□□□ 0.14
HCFC2-202ENST00000544223 OXER1Q8TDS5 423 aa15.91■□□□□ 0.14
HCFC2-202ENST00000544223 ZSCAN16Q9H4T2 348 aaPredicted RBP15.91■□□□□ 0.14
HCFC2-202ENST00000544223 KIF3AQ9Y496 699 aa15.91■□□□□ 0.14
HCFC2-202ENST00000544223 V9GY48 417 aaPredicted RBP15.91■□□□□ 0.14
HCFC2-202ENST00000544223 GAKO14976 1311 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 PPIP5K2O43314 1243 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 ORC4O43929 436 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 GOLGA8HP0CJ92 632 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 TSPY3P0CV98 308 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 TSPY8P0CW00 308 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 RASA1P20936 1047 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 CDK8P49336 464 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 NR5A1Q13285 461 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 R3HDM1Q15032 1099 aaKnown RBP15.9■□□□□ 0.14
HCFC2-202ENST00000544223 APOBEC3HQ6NTF7 200 aaKnown RBP15.9■□□□□ 0.14
HCFC2-202ENST00000544223 CDC42EP5Q6NZY7 148 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 CATIPQ7Z7H3 387 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 STAG2Q8N3U4 1231 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 ERCC4Q92889 916 aaPredicted RBP15.9■□□□□ 0.14
HCFC2-202ENST00000544223 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 VPS54Q9P1Q0 977 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 A0A087WWV3 80 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 GOLGA6L4A6NEF3 574 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 BTBD18B2RXH4 712 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 FMNL1O95466 1100 aaPredicted RBP15.9■□□□□ 0.14
HCFC2-202ENST00000544223 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 NOM1Q5C9Z4 860 aaKnown RBP15.9■□□□□ 0.14
HCFC2-202ENST00000544223 CKAP2LQ8IYA6 745 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 BICD2Q8TD16 824 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 EYA3Q99504 573 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 DACT1Q9NYF0 836 aa15.9■□□□□ 0.14
HCFC2-202ENST00000544223 ZBTB12Q9Y330 459 aaPredicted RBP15.9■□□□□ 0.14
HCFC2-202ENST00000544223 DDX60LQ5H9U9 1706 aaKnown RBP15.9■□□□□ 0.14
HCFC2-202ENST00000544223 FAM205CA6NFA0 338 aa15.89■□□□□ 0.13
HCFC2-202ENST00000544223 SLC3A2P08195 630 aaKnown RBP15.89■□□□□ 0.13
HCFC2-202ENST00000544223 IFNAR1P17181 557 aa15.89■□□□□ 0.13
HCFC2-202ENST00000544223 SRBD1Q8N5C6 995 aaKnown RBP15.89■□□□□ 0.13
HCFC2-202ENST00000544223 GOLPH3LQ9H4A5 285 aa15.89■□□□□ 0.13
HCFC2-202ENST00000544223 MYH6P13533 1939 aa15.89■□□□□ 0.13
HCFC2-202ENST00000544223 MARCKSP29966 332 aaPredicted RBP15.89■□□□□ 0.13
HCFC2-202ENST00000544223 CRKP46108 304 aa15.89■□□□□ 0.13
HCFC2-202ENST00000544223 ZNF445P59923 1031 aa15.89■□□□□ 0.13
HCFC2-202ENST00000544223 GNL2Q13823 731 aaKnown RBP15.89■□□□□ 0.13
HCFC2-202ENST00000544223 DACT2Q5SW24 774 aa15.89■□□□□ 0.13
HCFC2-202ENST00000544223 CPLX2Q6PUV4 134 aaKnown RBP15.89■□□□□ 0.13
HCFC2-202ENST00000544223 SCAND2PQ9GZW5 306 aaPredicted RBP15.89■□□□□ 0.13
HCFC2-202ENST00000544223 COL4A5P29400 1685 aa15.88■□□□□ 0.13
HCFC2-202ENST00000544223 CDKL5O76039 1030 aa15.88■□□□□ 0.13
HCFC2-202ENST00000544223 ME1P48163 572 aa15.88■□□□□ 0.13
HCFC2-202ENST00000544223 ZNF444Q8N0Y2 327 aaPredicted RBP15.88■□□□□ 0.13
HCFC2-202ENST00000544223 TTLL6Q8N841 843 aa15.88■□□□□ 0.13
HCFC2-202ENST00000544223 MYSM1Q5VVJ2 828 aa15.88■□□□□ 0.13
HCFC2-202ENST00000544223 PCNTO95613 3336 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 FUT2Q10981 343 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 PKN1Q16512 942 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 LRSAM1Q6UWE0 723 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 PODNQ7Z5L7 613 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 TMTC2Q8N394 836 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 TEKT1Q969V4 418 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 FAM163AQ96GL9 167 aaPredicted RBP15.87■□□□□ 0.13
HCFC2-202ENST00000544223 EARS2Q5JPH6 523 aaKnown RBP15.87■□□□□ 0.13
HCFC2-202ENST00000544223 AMOTL1Q8IY63 956 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 PNMA1Q8ND90 353 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 MRVI1Q9Y6F6 885 aa15.87■□□□□ 0.13
HCFC2-202ENST00000544223 MRE11P49959 708 aa15.86■□□□□ 0.13
HCFC2-202ENST00000544223 TRIM22Q8IYM9 498 aa15.86■□□□□ 0.13
HCFC2-202ENST00000544223 CEP95Q96GE4 821 aa15.86■□□□□ 0.13
HCFC2-202ENST00000544223 KAT14Q9H8E8 782 aa15.86■□□□□ 0.13
HCFC2-202ENST00000544223 CFAP45Q9UL16 551 aa15.86■□□□□ 0.13
HCFC2-202ENST00000544223 SNED1Q8TER0 1413 aa15.86■□□□□ 0.13
HCFC2-202ENST00000544223 SLC35G1Q2M3R5 365 aa15.86■□□□□ 0.13
HCFC2-202ENST00000544223 CCDC183Q5T5S1 534 aa15.86■□□□□ 0.13
HCFC2-202ENST00000544223 DIS3L2Q8IYB7 885 aaKnown RBP15.86■□□□□ 0.13
HCFC2-202ENST00000544223 GPKOWQ92917 476 aaPredicted RBP eCLIP15.86■□□□□ 0.13
HCFC2-202ENST00000544223 TDRD3Q9H7E2 651 aaKnown RBP15.86■□□□□ 0.13
HCFC2-202ENST00000544223 PCDHA7Q9UN72 937 aa15.86■□□□□ 0.13
HCFC2-202ENST00000544223 C10orf71Q711Q0 1435 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 A0A1B0GVL5 298 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 KIAA2012Q0VF49 1180 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 TRIM29Q14134 588 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 L1TD1Q5T7N2 865 aaKnown RBP15.85■□□□□ 0.13
HCFC2-202ENST00000544223 C16orf86Q6ZW13 317 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 SLF2Q8IX21 1173 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms