RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ZNF669Q96BR6 464 aaPredicted RBP5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 SMG9Q9H0W8 520 aaKnown RBP5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 RBSNQ9H1K0 784 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 ZMYM5Q9UJ78 669 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 ATP8A1Q9Y2Q0 1164 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 PCDHB14Q9Y5E9 798 aa5.32□□□□□ -1.56
SFSWAP-211ENST00000542813 A0A1W2PQH9 124 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 PDE2AO00408 941 aaPredicted RBP5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 DLL1O00548 723 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 DEAF1O75398 565 aaPredicted RBP5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 EIF2AK2P19525 551 aaKnown RBP5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 BMP6P22004 513 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 NME2P22392 152 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 CDKN1CP49918 316 aaPredicted RBP5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 EXOSC10Q01780 885 aaKnown RBP5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 TMEM67Q5HYA8 995 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 LLGL2Q6P1M3 1020 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 RUFY4Q6ZNE9 571 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 PRR23CQ6ZRP0 262 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 JAMLQ86YT9 394 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 SULF2Q8IWU5 870 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 CCAR1Q8IX12 1150 aaKnown RBP5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 MORC4Q8TE76 937 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 MFSD3Q96ES6 412 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 SGSM3Q96HU1 749 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 MEGF10Q96KG7 1140 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 EHMT1Q9H9B1 1298 aa5.31□□□□□ -1.56
SFSWAP-211ENST00000542813 TBX4P57082 545 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 EVA1CP58658 441 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 RPL6Q02878 288 aaKnown RBP5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 C21orf62-AS1Q17RA5 79 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 MRM1Q6IN84 353 aaKnown RBP5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 HFE2Q6ZVN8 426 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 EEPD1Q7L9B9 569 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 TTC6Q86TZ1 520 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 SLC51AQ86UW1 340 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 NIM1KQ8IY84 436 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 DZIP1LQ8IYY4 767 aaKnown RBP5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 DCAF11Q8TEB1 546 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 ZNF526Q8TF50 670 aaPredicted RBP5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 CHAC2Q8WUX2 184 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 GAL3ST3Q96A11 431 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 PBX4Q9BYU1 374 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 MUC3BQ9H195 1237 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 CLEC4MQ9H2X3 399 aaPredicted RBP5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 AKTIPQ9H8T0 292 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 CBX8Q9HC52 389 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 TCEAL9Q9UHQ7 104 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 THRAP3Q9Y2W1 955 aaKnown RBP5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 POLR3KQ9Y2Y1 108 aaPredicted RBP5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 CC2D2AQ9P2K1 1620 aa5.3□□□□□ -1.56
SFSWAP-211ENST00000542813 BICRAQ9NZM4 1560 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 KCNQ2O43526 872 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 PRC1O43663 620 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 GRIN3BO60391 1043 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 ATE1O95260 518 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 GUCY2CP25092 1073 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 STAT3P40763 770 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 TM4SF20Q53R12 229 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 BRDTQ58F21 947 aaPredicted RBP5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 THNSL2Q86YJ6 484 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 GRIN3AQ8TCU5 1115 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 STK35Q8TDR2 534 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 NINJ1Q92982 152 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 TM9SF2Q99805 663 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 FAM126AQ9BYI3 521 aaPredicted RBP5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 MRPL18Q9H0U6 180 aaKnown RBP5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 RASSF4Q9H2L5 321 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 GEMIN8Q9NWZ8 242 aaKnown RBP5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 EID1Q9Y6B2 187 aa5.29□□□□□ -1.56
SFSWAP-211ENST00000542813 LOC102724428A0A0B4J2F2 783 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 MEIS3P2A8K0S8 358 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 UPK3BL1B0FP48 263 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 UPK3BL2E5RIL1 263 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 IRS4O14654 1257 aaPredicted RBP5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 B3GALT4O96024 378 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 GHRHP01286 108 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 FAM153BP0C7A2 387 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 MYCLP1P12525 358 aaPredicted RBP5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 POU3F3P20264 500 aaPredicted RBP5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 ARNTP27540 789 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 SOX5P35711 763 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 SIK1P57059 783 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 ATP11AP98196 1134 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 PCDH1Q08174 1060 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 LRRFIP1Q32MZ4 808 aaKnown RBP5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 CT47A1Q5JQC4 288 aaPredicted RBP5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 MAP4K3Q8IVH8 894 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 TMEM130Q8N3G9 435 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 BSNDQ8WZ55 320 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 C8orf48Q96LL4 319 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 SPATA9Q9BWV2 254 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 EMILIN2Q9BXX0 1053 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 ANTXR1Q9H6X2 564 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 CAAP1Q9H8G2 361 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 SLC12A7Q9Y666 1083 aa5.28□□□□□ -1.56
SFSWAP-211ENST00000542813 ALG1L2C9J202 215 aa5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 F8W735 103 aaPredicted RBP5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 J3QW42 95 aa5.27□□□□□ -1.57
SFSWAP-211ENST00000542813 NCAPHQ15003 741 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms