RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 UTYO14607 1347 aa11.29□□□□□ -0.6
CCDC144NL-203ENST00000539484 CCL15-CCL14A0A0B4J2E2 113 aa11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 PDE8BO95263 885 aa11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 KIF22Q14807 665 aa11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 CCL15Q16663 113 aa11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 MYH2Q9UKX2 1941 aa11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 AOX1Q06278 1338 aa11.28□□□□□ -0.6
CCDC144NL-203ENST00000539484 SLC5A1P13866 664 aa11.27□□□□□ -0.61
CCDC144NL-203ENST00000539484 VGLL4Q14135 290 aa11.27□□□□□ -0.61
CCDC144NL-203ENST00000539484 PUM3Q15397 648 aaKnown RBP11.27□□□□□ -0.61
CCDC144NL-203ENST00000539484 NBPF11Q86T75 865 aa11.27□□□□□ -0.61
CCDC144NL-203ENST00000539484 KAZALD1Q96I82 304 aa11.27□□□□□ -0.61
CCDC144NL-203ENST00000539484 SUGT1Q9Y2Z0 365 aa11.27□□□□□ -0.61
CCDC144NL-203ENST00000539484 TNRC18O15417 2968 aaPredicted RBP11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 E9PSI1 815 aa11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 SUZ12Q15022 739 aaKnown RBP11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 FAM83AQ86UY5 434 aa11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 NPAS3Q8IXF0 933 aa11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 WDR66Q8TBY9 1149 aa11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 ZDHHC15Q96MV8 337 aa11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 TEPSINQ96N21 525 aa11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 WRNIP1Q96S55 665 aa11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 PTPN18Q99952 460 aa11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 MRIQ9BWK5 157 aa11.26□□□□□ -0.61
CCDC144NL-203ENST00000539484 CETPP11597 493 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 GCGRP47871 477 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 CACNB3P54284 484 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 SNAPC2Q13487 334 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 SLC9C1Q4G0N8 1177 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 ERO1BQ86YB8 467 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 ANKRD44Q8N8A2 993 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 KLHDC4Q8TBB5 520 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 BRI3BPQ8WY22 251 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 GNL3LQ9NVN8 582 aaKnown RBP11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 KIF16BQ96L93 1317 aa11.25□□□□□ -0.61
CCDC144NL-203ENST00000539484 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 EYA2O00167 538 aa11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 GRIK5Q16478 980 aa11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 SLC4A8Q2Y0W8 1093 aa11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 HHIPL2Q6UWX4 724 aa11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 LPIN2Q92539 896 aa11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 ARMC5Q96C12 935 aa11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 ZNF341Q9BYN7 854 aa11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 ZCCHC17Q9NP64 241 aaKnown RBP11.24□□□□□ -0.61
CCDC144NL-203ENST00000539484 MGAMO43451 1857 aa11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 UBTFL1P0CB47 393 aaPredicted RBP11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 FAM43AQ8N2R8 423 aa11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 ZKSCAN4Q969J2 545 aaPredicted RBP11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 USP44Q9H0E7 712 aa11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 CEP126Q9P2H0 1117 aa11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 RPAP1Q9BWH6 1393 aaPredicted RBP11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
CCDC144NL-203ENST00000539484 IRF6O14896 467 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 TLR2O60603 784 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 GNRH1P01148 92 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 FGFR2P21802 821 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 PPATQ06203 517 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 PPIL2Q13356 520 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 APOBEC3HQ6NTF7 200 aaKnown RBP11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 MIGA2Q7L4E1 593 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 ZNF521Q96K83 1311 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 PTCH2Q9Y6C5 1203 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 SNCAIPQ9Y6H5 919 aa11.22□□□□□ -0.61
CCDC144NL-203ENST00000539484 ZSWIM8A7E2V4 1837 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 BTBD19C9JJ37 291 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 EN2P19622 333 aaPredicted RBP11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 HOXD10P28358 340 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 MMP16P51512 607 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 PRMT2P55345 433 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 TCP10Q12799 353 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 ATP2B3Q16720 1220 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 ZGPATQ8N5A5 531 aaKnown RBP11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 ZNF333Q96JL9 665 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 SIL1Q9H173 461 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 DENND2AQ9ULE3 1009 aa11.21□□□□□ -0.61
CCDC144NL-203ENST00000539484 MYCP01106 439 aaPredicted RBP11.2□□□□□ -0.62
CCDC144NL-203ENST00000539484 SLFN5Q08AF3 891 aa11.2□□□□□ -0.62
CCDC144NL-203ENST00000539484 HIC1Q14526 733 aa11.2□□□□□ -0.62
CCDC144NL-203ENST00000539484 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.2□□□□□ -0.62
CCDC144NL-203ENST00000539484 DAGLAQ9Y4D2 1042 aa11.2□□□□□ -0.62
CCDC144NL-203ENST00000539484 SEMA3EO15041 775 aa11.19□□□□□ -0.62
CCDC144NL-203ENST00000539484 CIAO1O76071 339 aa11.19□□□□□ -0.62
CCDC144NL-203ENST00000539484 PRDX5P30044 214 aa11.19□□□□□ -0.62
CCDC144NL-203ENST00000539484 INPP5BP32019 993 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms