RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 RAI14Q9P0K7 980 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 NFE2L3Q9Y4A8 694 aa13.72□□□□□ -0.21
CPNE8-203ENST00000538596 DYNLL1P63167 89 aaKnown RBP13.71□□□□□ -0.21
CPNE8-203ENST00000538596 ITPK1Q13572 414 aa13.71□□□□□ -0.21
CPNE8-203ENST00000538596 NOM1Q5C9Z4 860 aaKnown RBP13.71□□□□□ -0.21
CPNE8-203ENST00000538596 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.21
CPNE8-203ENST00000538596 C3orf67Q6ZVT6 689 aa13.71□□□□□ -0.21
CPNE8-203ENST00000538596 FOXP1Q9H334 677 aaPredicted RBP13.71□□□□□ -0.21
CPNE8-203ENST00000538596 TMX1Q9H3N1 280 aa13.71□□□□□ -0.21
CPNE8-203ENST00000538596 TIAM2Q8IVF5 1701 aa13.71□□□□□ -0.22
CPNE8-203ENST00000538596 KIF2AO00139 706 aaPredicted RBP13.71□□□□□ -0.22
CPNE8-203ENST00000538596 CBFA2T2O43439 604 aa13.71□□□□□ -0.22
CPNE8-203ENST00000538596 NTSR2O95665 410 aa13.71□□□□□ -0.22
CPNE8-203ENST00000538596 GNAT2P19087 354 aa13.71□□□□□ -0.22
CPNE8-203ENST00000538596 ZNF397Q8NF99 534 aaPredicted RBP13.71□□□□□ -0.22
CPNE8-203ENST00000538596 L2HGDHQ9H9P8 463 aa13.71□□□□□ -0.22
CPNE8-203ENST00000538596 SAMSN1Q9NSI8 373 aaKnown RBP13.71□□□□□ -0.22
CPNE8-203ENST00000538596 TAF1P21675 1872 aa13.71□□□□□ -0.22
CPNE8-203ENST00000538596 A0A087X0B3 334 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 NRDCO43847 1150 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 ADKP55263 362 aaKnown RBP13.7□□□□□ -0.22
CPNE8-203ENST00000538596 CCDC93Q567U6 631 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 TRIM65Q6PJ69 517 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 SMIM5Q71RC9 77 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 TMEM139Q8IV31 216 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 EPSTI1Q96J88 318 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 MYH2Q9UKX2 1941 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 BCORQ6W2J9 1755 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 ACTN4O43707 911 aaKnown RBP13.7□□□□□ -0.22
CPNE8-203ENST00000538596 PLEKHA8P1O95397 391 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 CDK11BP21127 795 aaKnown RBP13.7□□□□□ -0.22
CPNE8-203ENST00000538596 SEC23AQ15436 765 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 REXO1L1PQ8IX06 675 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 AK7Q96M32 723 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 NID2Q14112 1375 aa13.7□□□□□ -0.22
CPNE8-203ENST00000538596 AFMP43652 599 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 KCNJ6P48051 423 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 ETF1P62495 437 aaKnown RBP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 ENAHQ8N8S7 591 aaPredicted RBP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 DHX58Q96C10 678 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 SRPRBQ9Y5M8 271 aaKnown RBP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 BAZ2AQ9UIF9 1905 aaKnown RBP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 MYH14Q7Z406 1995 aaKnown RBP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 MAGEB6P1A0A0J9YX57 407 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 SARSP49591 514 aaKnown RBP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 MORC3Q14149 939 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 PKN1Q16512 942 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 ZNF446Q9NWS9 450 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 V9GY48 417 aaPredicted RBP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 COL1A1P02452 1464 aaPredicted RBP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 MYH6P13533 1939 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 LOC102724428A0A0B4J2F2 783 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 SIK1P57059 783 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 ZNF384Q8TF68 577 aa13.69□□□□□ -0.22
CPNE8-203ENST00000538596 RNF41Q9H4P4 317 aaPredicted RBP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.69□□□□□ -0.22
CPNE8-203ENST00000538596 ZNF18P17022 549 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 KCNQ4P56696 695 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 ESR2Q92731 530 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 NMT2O60551 498 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 COBLO75128 1261 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 STX17P56962 302 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 NT5DC1Q5TFE4 455 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 KLHL10Q6JEL2 608 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 TOGARAM2Q6ZUX3 1019 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 SMYD4Q8IYR2 804 aaPredicted RBP13.68□□□□□ -0.22
CPNE8-203ENST00000538596 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 STAMQ92783 540 aa13.68□□□□□ -0.22
CPNE8-203ENST00000538596 RIOK1Q9BRS2 568 aaKnown RBP13.68□□□□□ -0.22
CPNE8-203ENST00000538596 HOOK1Q9UJC3 728 aaKnown RBP13.68□□□□□ -0.22
CPNE8-203ENST00000538596 MORC2Q9Y6X9 1032 aaPredicted RBP13.68□□□□□ -0.22
CPNE8-203ENST00000538596 VWA3AA6NCI4 1184 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
CPNE8-203ENST00000538596 TC2NQ8N9U0 490 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 ZSCAN10Q96SZ4 725 aaPredicted RBP13.67□□□□□ -0.22
CPNE8-203ENST00000538596 PPP2R2CQ9Y2T4 447 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 BCL9LQ86UU0 1499 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 URI1O94763 535 aaPredicted RBP13.67□□□□□ -0.22
CPNE8-203ENST00000538596 KLRK1P26718 216 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
CPNE8-203ENST00000538596 FUT2Q10981 343 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 ERFEQ4G0M1 354 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 UTP14CQ5TAP6 766 aaKnown RBP13.67□□□□□ -0.22
CPNE8-203ENST00000538596 BAG1Q99933 345 aaPredicted RBP13.67□□□□□ -0.22
CPNE8-203ENST00000538596 DESI2Q9BSY9 194 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 ST7Q9NRC1 585 aa13.67□□□□□ -0.22
CPNE8-203ENST00000538596 COL16A1Q07092 1604 aaPredicted RBP13.67□□□□□ -0.22
CPNE8-203ENST00000538596 CICQ96RK0 1608 aaPredicted RBP13.67□□□□□ -0.22
CPNE8-203ENST00000538596 TEX33O43247 280 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
CPNE8-203ENST00000538596 ZNF174Q15697 407 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 PARP10Q53GL7 1025 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 IFIT1BQ5T764 474 aaKnown RBP13.66□□□□□ -0.22
CPNE8-203ENST00000538596 BICDL1Q6ZP65 573 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 ZNF579Q8NAF0 562 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms