RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-208	ENST00000537607	TEKT1	Q969V4	418 aa		13.77	□□□□□ -0.21
CIT-208	ENST00000537607	LZTS2	Q9BRK4	669 aa		13.77	□□□□□ -0.21
CIT-208	ENST00000537607	ANTXR1	Q9H6X2	564 aa		13.77	□□□□□ -0.21
CIT-208	ENST00000537607	RHOXF2B	P0C7M4	288 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	KIAA0825	Q8IV33	1275 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.76	□□□□□ -0.21
CIT-208	ENST00000537607	RHOXF2	Q9BQY4	288 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	FRMD4B	Q9Y2L6	1034 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	CYP21A2	P08686	494 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	MYCL	P12524	364 aa	Predicted RBP	13.76	□□□□□ -0.21
CIT-208	ENST00000537607	MAEA	Q7L5Y9	396 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.76	□□□□□ -0.21
CIT-208	ENST00000537607	SEC31B	Q9NQW1	1179 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	CCDC169	A6NNP5	214 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	SCNN1D	P51172	638 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	PNMA1	Q8ND90	353 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	BLZF1	Q9H2G9	400 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.76	□□□□□ -0.21
CIT-208	ENST00000537607	SMCO2	A6NFE2	343 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	BTBD18	B2RXH4	712 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	DDX39A	O00148	427 aa	Known RBP	13.76	□□□□□ -0.21
CIT-208	ENST00000537607	CETN3	O15182	167 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	PLCB3	Q01970	1234 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	UBE3C	Q15386	1083 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	CALCRL	Q16602	461 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	ADAL	Q6DHV7	355 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	PI16	Q6UXB8	463 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.76	□□□□□ -0.21
CIT-208	ENST00000537607	NOSTRIN	Q8IVI9	506 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	TMEM87A	Q8NBN3	555 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	HOMER2	Q9NSB8	354 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	SERTAD1	Q9UHV2	236 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	TSPOAP1	O95153	1857 aa		13.76	□□□□□ -0.21
CIT-208	ENST00000537607	EPB41	P11171	864 aa	Known RBP	13.75	□□□□□ -0.21
CIT-208	ENST00000537607	DOK7	Q18PE1	504 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	GPIHBP1	Q8IV16	184 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	TAB2	Q9NYJ8	693 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	TBC1D7	Q9P0N9	293 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	BIRC3	Q13489	604 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	ARHGEF35	A5YM69	484 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	NR1I2	O75469	434 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	BIN2	Q9UBW5	565 aa	Predicted RBP	13.75	□□□□□ -0.21
CIT-208	ENST00000537607	ERCC6L2	Q5T890	1561 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	CD2BP2	O95400	341 aa	Known RBP	13.75	□□□□□ -0.21
CIT-208	ENST00000537607	PDIA3	P30101	505 aa	Known RBP	13.75	□□□□□ -0.21
CIT-208	ENST00000537607	PNOC	Q13519	176 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	ZMYM1	Q5SVZ6	1142 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	HECW2	Q9P2P5	1572 aa		13.75	□□□□□ -0.21
CIT-208	ENST00000537607	GOLGA8H	P0CJ92	632 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	PFKFB1	P16118	471 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	CABP7	Q86V35	215 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	SUPT20H	Q8NEM7	779 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	KRT9	P35527	623 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	NCBP1	Q09161	790 aa	Known RBP	13.74	□□□□□ -0.21
CIT-208	ENST00000537607	BBX	Q8WY36	941 aa	Predicted RBP	13.74	□□□□□ -0.21
CIT-208	ENST00000537607	FERMT1	Q9BQL6	677 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	GPR108	Q9NPR9	543 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	TMOD4	Q9NZQ9	345 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	KIF1B	O60333	1816 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	ZNF804B	A4D1E1	1349 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	ADCY9	O60503	1353 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	CIAO1	O76071	339 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	ATP2B4	P23634	1241 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	NIM1K	Q8IY84	436 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	IKBKG	Q9Y6K9	419 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	PTPN12	Q05209	780 aa	Known RBP	13.74	□□□□□ -0.21
CIT-208	ENST00000537607	NELFCD	Q8IXH7	590 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	CCDC155	Q8N6L0	562 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	ZNF408	Q9H9D4	720 aa		13.74	□□□□□ -0.21
CIT-208	ENST00000537607	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.73	□□□□□ -0.21
CIT-208	ENST00000537607	ABCC3	O15438	1527 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	PDE6B	P35913	854 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	SCRN1	Q12765	414 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	FNBP1	Q96RU3	617 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	ATP6V0A2	Q9Y487	856 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	CCDC50	Q8IVM0	306 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	KIAA1468	Q9P260	1216 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	DNM3	Q9UQ16	869 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	RGS12	O14924	1447 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	KLRF2	D3W0D1	207 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	BTD	P43251	543 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	GRIPAP1	Q4V328	841 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	FAM196A	Q6ZSG2	479 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	NLRP10	Q86W26	655 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	LRRC47	Q8N1G4	583 aa	Known RBP	13.73	□□□□□ -0.21
CIT-208	ENST00000537607	RASAL2	Q9UJF2	1139 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	SMTN	P53814	917 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	IFT81	Q8WYA0	676 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	PIGB	Q92521	554 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	ZMYM6	O95789	1325 aa		13.73	□□□□□ -0.21
CIT-208	ENST00000537607	BLID	Q8IZY5	108 aa		13.72	□□□□□ -0.21
CIT-208	ENST00000537607	FBXO18	Q8NFZ0	1043 aa		13.72	□□□□□ -0.21
CIT-208	ENST00000537607	INF2	Q27J81	1249 aa		13.72	□□□□□ -0.21
CIT-208	ENST00000537607	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.72	□□□□□ -0.21
CIT-208	ENST00000537607	ANKAR	Q7Z5J8	1434 aa		13.72	□□□□□ -0.21
CIT-208	ENST00000537607	HEG1	Q9ULI3	1381 aa		13.72	□□□□□ -0.21
CIT-208	ENST00000537607	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.72	□□□□□ -0.21
CIT-208	ENST00000537607	SASH1	O94885	1247 aa		13.72	□□□□□ -0.21
CIT-208	ENST00000537607	TERF1	P54274	439 aa		13.72	□□□□□ -0.21
CIT-208	ENST00000537607	MICALCL	Q6ZW33	695 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms