RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 RRP1BQ14684 758 aaKnown RBP23.63■■□□□ 1.37
CHEK1-215ENST00000533778 ABCB5Q2M3G0 1257 aa23.63■■□□□ 1.37
CHEK1-215ENST00000533778 VPS53Q5VIR6 699 aa23.63■■□□□ 1.37
CHEK1-215ENST00000533778 OTUD7BQ6GQQ9 843 aa23.63■■□□□ 1.37
CHEK1-215ENST00000533778 DYNLL2Q96FJ2 89 aa23.63■■□□□ 1.37
CHEK1-215ENST00000533778 CCDC17Q96LX7 622 aa23.63■■□□□ 1.37
CHEK1-215ENST00000533778 CDK5RAP2Q96SN8 1893 aa23.63■■□□□ 1.37
CHEK1-215ENST00000533778 WBP1LQ9NX94 342 aa23.63■■□□□ 1.37
CHEK1-215ENST00000533778 GDF11O95390 407 aa23.62■■□□□ 1.37
CHEK1-215ENST00000533778 CETPP11597 493 aa23.62■■□□□ 1.37
CHEK1-215ENST00000533778 CDK8P49336 464 aa23.62■■□□□ 1.37
CHEK1-215ENST00000533778 ZBTB21Q9ULJ3 1066 aa23.62■■□□□ 1.37
CHEK1-215ENST00000533778 KCNH4Q9UQ05 1017 aa23.62■■□□□ 1.37
CHEK1-215ENST00000533778 TESPA1A2RU30 521 aaPredicted RBP23.61■■□□□ 1.37
CHEK1-215ENST00000533778 FOXP2O15409 715 aa23.61■■□□□ 1.37
CHEK1-215ENST00000533778 EVX2Q03828 476 aa23.61■■□□□ 1.37
CHEK1-215ENST00000533778 PPARAQ07869 468 aa23.61■■□□□ 1.37
CHEK1-215ENST00000533778 CASC1Q6TDU7 716 aa23.61■■□□□ 1.37
CHEK1-215ENST00000533778 MS4A4AQ96JQ5 239 aa23.61■■□□□ 1.37
CHEK1-215ENST00000533778 MKNK2Q9HBH9 465 aa23.61■■□□□ 1.37
CHEK1-215ENST00000533778 AFG3L2Q9Y4W6 797 aa23.61■■□□□ 1.37
CHEK1-215ENST00000533778 NAV1Q8NEY1 1877 aa23.61■■□□□ 1.37
CHEK1-215ENST00000533778 MYH1P12882 1939 aa23.61■■□□□ 1.37
CHEK1-215ENST00000533778 ZMYM6O95789 1325 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 THSD7BQ9C0I4 1608 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 DDX60LQ5H9U9 1706 aaKnown RBP23.6■■□□□ 1.37
CHEK1-215ENST00000533778 ALDH1A1P00352 501 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 GH2P01242 217 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 FGAP02671 866 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 PDE4BQ07343 736 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 SLC44A5Q8NCS7 719 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 ZNF280CQ8ND82 737 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 DSCC1Q9BVC3 393 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 ROBO3Q96MS0 1386 aa23.6■■□□□ 1.37
CHEK1-215ENST00000533778 CCL15-CCL14A0A0B4J2E2 113 aa23.59■■□□□ 1.37
CHEK1-215ENST00000533778 MPHOSPH10O00566 681 aaKnown RBP23.59■■□□□ 1.37
CHEK1-215ENST00000533778 CCL15Q16663 113 aa23.59■■□□□ 1.37
CHEK1-215ENST00000533778 WDR18Q9BV38 432 aa23.59■■□□□ 1.37
CHEK1-215ENST00000533778 CTNNA3Q9UI47 895 aa23.59■■□□□ 1.37
CHEK1-215ENST00000533778 OTOFQ9HC10 1997 aa23.58■■□□□ 1.37
CHEK1-215ENST00000533778 TMEM179Q6ZVK1 233 aa23.58■■□□□ 1.37
CHEK1-215ENST00000533778 FASTKD5Q7L8L6 764 aaKnown RBP23.58■■□□□ 1.37
CHEK1-215ENST00000533778 IFNL1Q8IU54 200 aa23.58■■□□□ 1.37
CHEK1-215ENST00000533778 ZNF444Q8N0Y2 327 aaPredicted RBP23.58■■□□□ 1.37
CHEK1-215ENST00000533778 SAGE1Q9NXZ1 904 aa23.58■■□□□ 1.37
CHEK1-215ENST00000533778 ANAPC4Q9UJX5 808 aa23.58■■□□□ 1.37
CHEK1-215ENST00000533778 TRIM75PA6NK02 468 aa23.57■■□□□ 1.36
CHEK1-215ENST00000533778 SGSM2O43147 1006 aa23.57■■□□□ 1.36
CHEK1-215ENST00000533778 HSPA1AP0DMV8 641 aaKnown RBP23.57■■□□□ 1.36
CHEK1-215ENST00000533778 HSPA1BP0DMV9 641 aaKnown RBP23.57■■□□□ 1.36
CHEK1-215ENST00000533778 JAG1P78504 1218 aa23.57■■□□□ 1.36
CHEK1-215ENST00000533778 SPP2Q13103 211 aa23.57■■□□□ 1.36
CHEK1-215ENST00000533778 RAB3GAP1Q15042 981 aa23.57■■□□□ 1.36
CHEK1-215ENST00000533778 SIPA1L1O43166 1804 aa23.56■■□□□ 1.36
CHEK1-215ENST00000533778 SMIM22K7EJ46 135 aa23.56■■□□□ 1.36
CHEK1-215ENST00000533778 CDC45O75419 566 aa23.56■■□□□ 1.36
CHEK1-215ENST00000533778 KIAA1211Q6ZU35 1233 aa23.56■■□□□ 1.36
CHEK1-215ENST00000533778 STK11IPQ8N1F8 1099 aa23.56■■□□□ 1.36
CHEK1-215ENST00000533778 BRI3BPQ8WY22 251 aa23.56■■□□□ 1.36
CHEK1-215ENST00000533778 ZCCHC17Q9NP64 241 aaKnown RBP23.56■■□□□ 1.36
CHEK1-215ENST00000533778 RNF186Q9NXI6 227 aa23.56■■□□□ 1.36
CHEK1-215ENST00000533778 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.56■■□□□ 1.36
CHEK1-215ENST00000533778 A0A0G2JLL6 359 aaPredicted RBP23.55■■□□□ 1.36
CHEK1-215ENST00000533778 C19orf81C9J6K1 198 aa23.55■■□□□ 1.36
CHEK1-215ENST00000533778 ZNF213O14771 459 aa23.55■■□□□ 1.36
CHEK1-215ENST00000533778 PRRT2Q7Z6L0 340 aaPredicted RBP23.55■■□□□ 1.36
CHEK1-215ENST00000533778 CCDC84Q86UT8 332 aaPredicted RBP23.55■■□□□ 1.36
CHEK1-215ENST00000533778 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
CHEK1-215ENST00000533778 AKR1B1P15121 316 aa23.54■■□□□ 1.36
CHEK1-215ENST00000533778 PTPN18Q99952 460 aa23.54■■□□□ 1.36
CHEK1-215ENST00000533778 IL25Q9H293 177 aa23.54■■□□□ 1.36
CHEK1-215ENST00000533778 USP17L10C9JJH3 530 aa23.53■■□□□ 1.36
CHEK1-215ENST00000533778 IGF2BP3O00425 579 aaKnown RBP eCLIP23.53■■□□□ 1.36
CHEK1-215ENST00000533778 TRPA1O75762 1119 aa23.53■■□□□ 1.36
CHEK1-215ENST00000533778 RASA1P20936 1047 aa23.53■■□□□ 1.36
CHEK1-215ENST00000533778 BACE1P56817 501 aa23.53■■□□□ 1.36
CHEK1-215ENST00000533778 SEPT2Q15019 361 aa23.53■■□□□ 1.36
CHEK1-215ENST00000533778 IMMTQ16891 758 aaKnown RBP23.53■■□□□ 1.36
CHEK1-215ENST00000533778 SHROOM1Q2M3G4 852 aaPredicted RBP23.53■■□□□ 1.36
CHEK1-215ENST00000533778 ANKRD23Q86SG2 305 aa23.53■■□□□ 1.36
CHEK1-215ENST00000533778 ESYT1Q9BSJ8 1104 aa23.53■■□□□ 1.36
CHEK1-215ENST00000533778 RNF41Q9H4P4 317 aaPredicted RBP23.53■■□□□ 1.36
CHEK1-215ENST00000533778 KANSL2Q9H9L4 492 aa23.53■■□□□ 1.36
CHEK1-215ENST00000533778 TMOD4Q9NZQ9 345 aa23.53■■□□□ 1.36
CHEK1-215ENST00000533778 DOCK1Q14185 1865 aa23.52■■□□□ 1.36
CHEK1-215ENST00000533778 GUCY1A2P33402 732 aa23.52■■□□□ 1.36
CHEK1-215ENST00000533778 CTCFP49711 727 aaPredicted RBP23.52■■□□□ 1.36
CHEK1-215ENST00000533778 CTDSPL2Q05D32 466 aa23.52■■□□□ 1.36
CHEK1-215ENST00000533778 SH3D19Q5HYK7 790 aa23.52■■□□□ 1.36
CHEK1-215ENST00000533778 PROCA1Q8NCQ7 364 aaPredicted RBP23.52■■□□□ 1.36
CHEK1-215ENST00000533778 FEZ1Q99689 392 aa23.52■■□□□ 1.36
CHEK1-215ENST00000533778 BAZ2AQ9UIF9 1905 aaKnown RBP23.51■■□□□ 1.35
CHEK1-215ENST00000533778 BTBD19C9JJ37 291 aa23.51■■□□□ 1.35
CHEK1-215ENST00000533778 PRDM1O75626 825 aa23.51■■□□□ 1.35
CHEK1-215ENST00000533778 NT5C2P49902 561 aa23.51■■□□□ 1.35
CHEK1-215ENST00000533778 USP14P54578 494 aa23.51■■□□□ 1.35
CHEK1-215ENST00000533778 MTMR2Q13614 643 aa23.51■■□□□ 1.35
CHEK1-215ENST00000533778 GADL1Q6ZQY3 521 aa23.51■■□□□ 1.35
CHEK1-215ENST00000533778 CFHR5Q9BXR6 569 aa23.51■■□□□ 1.35
CHEK1-215ENST00000533778 SH2D4AQ9H788 454 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms