RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 UTP14CQ5TAP6 766 aaKnown RBP8.06□□□□□ -1.12
CTNND1-229ENST00000531014 SYT10Q6XYQ8 523 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 PLXNC1O60486 1568 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 EEF1DP29692 281 aaKnown RBP8.06□□□□□ -1.12
CTNND1-229ENST00000531014 ZKSCAN8Q15776 578 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-229ENST00000531014 RRAGBQ5VZM2 374 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 DUSP27Q5VZP5 1158 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 SLC12A5Q9H2X9 1139 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 MMRN2Q9H8L6 949 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 CD2APQ9Y5K6 639 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 CCDC159P0C7I6 412 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 MCM7P33993 719 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 IRX5P78411 483 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-229ENST00000531014 ZSCAN23Q3MJ62 389 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 ZNF280CQ8ND82 737 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 CCDC124Q96CT7 223 aaKnown RBP8.06□□□□□ -1.12
CTNND1-229ENST00000531014 FBXO2Q9UK22 296 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-229ENST00000531014 ABCA6Q8N139 1617 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 SPATA31A1Q5TZJ5 1347 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 CHMP4BP1P59074 171 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 GUCY1B3Q02153 619 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 RRS1Q15050 365 aaKnown RBP8.06□□□□□ -1.12
CTNND1-229ENST00000531014 GRAMD4Q6IC98 578 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 CEP19Q96LK0 163 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 IMPG2Q9BZV3 1241 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 PRKAG2Q9UGJ0 569 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 ADGRB2O60241 1585 aa8.06□□□□□ -1.12
CTNND1-229ENST00000531014 MROH2AA6NES4 1674 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 E7EVH7 732 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 NOP14P78316 857 aaKnown RBP8.05□□□□□ -1.12
CTNND1-229ENST00000531014 ANKRD20A4Q4UJ75 823 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 CAVIN4Q5BKX8 364 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 ANKRD20A8PQ5CZ79 823 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 AKAP4Q5JQC9 854 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 ANKRD20A2Q5SQ80 823 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 ANKRD20A1Q5TYW2 823 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 WDR78Q5VTH9 848 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 CFAP61Q8NHU2 1237 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 RILPQ96NA2 401 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 PLCB1Q9NQ66 1216 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 DIABLOQ9NR28 239 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 KLHL14Q9P2G3 628 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 CEP126Q9P2H0 1117 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 TRMT112Q9UI30 125 aaKnown RBP8.05□□□□□ -1.12
CTNND1-229ENST00000531014 ADAMTSL3P82987 1691 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 FRMD3A2A2Y4 597 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 GOLGA6BA6NDN3 693 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 PPP1R12AO14974 1030 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-229ENST00000531014 CAPN15O75808 1086 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 POLE2P56282 527 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 RASA3Q14644 834 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 C8orf74Q6P047 294 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 IFT20Q8IY31 132 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 LRP2BPQ9P2M1 347 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 PSMA7O14818 248 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 TWISTNBQ3B726 338 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-229ENST00000531014 SLC12A7Q9Y666 1083 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 IQGAP1P46940 1657 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 ZFYVE9O95405 1425 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 KARSQ15046 597 aaKnown RBP8.05□□□□□ -1.12
CTNND1-229ENST00000531014 CCDC152Q4G0S7 254 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 TTC19Q6DKK2 380 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-229ENST00000531014 PRPF40BQ6NWY9 871 aaKnown RBP8.05□□□□□ -1.12
CTNND1-229ENST00000531014 SCOCQ9UIL1 159 aa8.05□□□□□ -1.12
CTNND1-229ENST00000531014 A0A1B0GW55 424 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 DUX4L2P0CJ85 424 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 DUX4L3P0CJ86 424 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 DUX4L4P0CJ87 422 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 DUX4L5P0CJ88 424 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 DUX4L6P0CJ89 424 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 DUX4L7P0CJ90 424 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 MTMR3Q13615 1198 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 RPS6KA2Q15349 733 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 ISM2Q6H9L7 571 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 MCM10Q7L590 875 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 RMDN2Q96LZ7 410 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 CCDC138Q96M89 665 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 MAK16Q9BXY0 300 aaKnown RBP8.04□□□□□ -1.12
CTNND1-229ENST00000531014 LZTFL1Q9NQ48 299 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 DUX4Q9UBX2 424 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 MED14O60244 1454 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 HMOX1P09601 288 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 HOXD10P28358 340 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 DZIP3Q86Y13 1208 aaKnown RBP8.04□□□□□ -1.12
CTNND1-229ENST00000531014 CCDC82Q8N4S0 544 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 NIP7Q9Y221 180 aaKnown RBP eCLIP8.04□□□□□ -1.12
CTNND1-229ENST00000531014 UTP11Q9Y3A2 253 aaKnown RBP8.04□□□□□ -1.12
CTNND1-229ENST00000531014 METP08581 1390 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 SYKP43405 635 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 ARHGAP4P98171 946 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 TNFAIP1Q13829 316 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 ANO6Q4KMQ2 910 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 IQCA1Q86XH1 822 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 RABEP2Q9H5N1 569 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.04□□□□□ -1.129e-8■□□□□ 10.6
CTNND1-229ENST00000531014 TFIP11Q9UBB9 837 aaKnown RBP8.04□□□□□ -1.12
CTNND1-229ENST00000531014 NOB1Q9ULX3 412 aaKnown RBP8.04□□□□□ -1.12
CTNND1-229ENST00000531014 RIOK3O14730 519 aaKnown RBP8.04□□□□□ -1.12
CTNND1-229ENST00000531014 TTC4O95801 387 aa8.04□□□□□ -1.12
CTNND1-229ENST00000531014 BMP15O95972 392 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms