RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 DSCC1Q9BVC3 393 aa18.23■□□□□ 0.51
CCS-206ENST00000530961 ZNF287Q9HBT7 754 aa18.23■□□□□ 0.51
CCS-206ENST00000530961 SAGE1Q9NXZ1 904 aa18.23■□□□□ 0.51
CCS-206ENST00000530961 CYP2D7A0A087X1C5 515 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 CDC45O75419 566 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 ASNSP08243 561 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 SHMT1P34896 483 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 PPATQ06203 517 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 CERKLQ49MI3 558 aaPredicted RBP18.22■□□□□ 0.51
CCS-206ENST00000530961 C16orf86Q6ZW13 317 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 REM2Q8IYK8 340 aaPredicted RBP18.22■□□□□ 0.51
CCS-206ENST00000530961 OPTNQ96CV9 577 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 WNK4Q96J92 1243 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 HPS5Q9UPZ3 1129 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 ZMYM6O95789 1325 aa18.22■□□□□ 0.51
CCS-206ENST00000530961 TRPM7Q96QT4 1865 aa18.21■□□□□ 0.51
CCS-206ENST00000530961 CDK8P49336 464 aa18.21■□□□□ 0.51
CCS-206ENST00000530961 PPARAQ07869 468 aa18.21■□□□□ 0.51
CCS-206ENST00000530961 DYNLL2Q96FJ2 89 aa18.21■□□□□ 0.51
CCS-206ENST00000530961 CCDC17Q96LX7 622 aa18.21■□□□□ 0.51
CCS-206ENST00000530961 TBC1D2Q9BYX2 928 aa18.21■□□□□ 0.51
CCS-206ENST00000530961 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
CCS-206ENST00000530961 CTNNA3Q9UI47 895 aa18.21■□□□□ 0.51
CCS-206ENST00000530961 PTPRAP18433 802 aa18.2■□□□□ 0.5
CCS-206ENST00000530961 EVX2Q03828 476 aa18.2■□□□□ 0.5
CCS-206ENST00000530961 PPIL2Q13356 520 aa18.2■□□□□ 0.5
CCS-206ENST00000530961 RRP1BQ14684 758 aaKnown RBP18.2■□□□□ 0.5
CCS-206ENST00000530961 KIAA1211Q6ZU35 1233 aa18.2■□□□□ 0.5
CCS-206ENST00000530961 IL25Q9H293 177 aa18.2■□□□□ 0.5
CCS-206ENST00000530961 CABP5Q9NP86 173 aa18.2■□□□□ 0.5
CCS-206ENST00000530961 ANAPC4Q9UJX5 808 aa18.2■□□□□ 0.5
CCS-206ENST00000530961 ZHX2Q9Y6X8 837 aa18.2■□□□□ 0.5
CCS-206ENST00000530961 INHBEP58166 350 aa18.19■□□□□ 0.5
CCS-206ENST00000530961 KIF23Q02241 960 aaPredicted RBP18.19■□□□□ 0.5
CCS-206ENST00000530961 PDE4BQ07343 736 aa18.19■□□□□ 0.5
CCS-206ENST00000530961 OTUD5Q96G74 571 aa18.19■□□□□ 0.5
CCS-206ENST00000530961 ESYT1Q9BSJ8 1104 aa18.19■□□□□ 0.5
CCS-206ENST00000530961 MKNK2Q9HBH9 465 aa18.19■□□□□ 0.5
CCS-206ENST00000530961 ROBO3Q96MS0 1386 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 MANSC4A6NHS7 340 aaPredicted RBP18.18■□□□□ 0.5
CCS-206ENST00000530961 USP17L5A8MUK1 530 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 SMIM22K7EJ46 135 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 GJA5P36382 358 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 GTF2A2P52657 109 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 PKN2Q16513 984 aaKnown RBP18.18■□□□□ 0.5
CCS-206ENST00000530961 ABCB5Q2M3G0 1257 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 SLC44A5Q8NCS7 719 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 AS3MTQ9HBK9 375 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 ZBTB21Q9ULJ3 1066 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 ECM29Q5VYK3 1845 aa18.18■□□□□ 0.5
CCS-206ENST00000530961 CXCL11O14625 94 aa18.17■□□□□ 0.5
CCS-206ENST00000530961 ZNF213O14771 459 aa18.17■□□□□ 0.5
CCS-206ENST00000530961 IRF6O14896 467 aa18.17■□□□□ 0.5
CCS-206ENST00000530961 GDF11O95390 407 aa18.17■□□□□ 0.5
CCS-206ENST00000530961 GH2P01242 217 aa18.17■□□□□ 0.5
CCS-206ENST00000530961 PCP11498 1178 aaKnown RBP18.17■□□□□ 0.5
CCS-206ENST00000530961 SREBF2Q12772 1141 aa18.17■□□□□ 0.5
CCS-206ENST00000530961 MKRN3Q13064 507 aaKnown RBP18.17■□□□□ 0.5
CCS-206ENST00000530961 SNAPC2Q13487 334 aa18.17■□□□□ 0.5
CCS-206ENST00000530961 ZNF444Q8N0Y2 327 aaPredicted RBP18.17■□□□□ 0.5
CCS-206ENST00000530961 KCNH4Q9UQ05 1017 aa18.17■□□□□ 0.5
CCS-206ENST00000530961 AFG3L2Q9Y4W6 797 aa18.17■□□□□ 0.5
CCS-206ENST00000530961 TM4SF4P48230 202 aa18.16■□□□□ 0.5
CCS-206ENST00000530961 JAG1P78504 1218 aa18.16■□□□□ 0.5
CCS-206ENST00000530961 IMMTQ16891 758 aaKnown RBP18.16■□□□□ 0.5
CCS-206ENST00000530961 TMEM179Q6ZVK1 233 aa18.16■□□□□ 0.5
CCS-206ENST00000530961 ZNF280CQ8ND82 737 aa18.16■□□□□ 0.5
CCS-206ENST00000530961 MS4A4AQ96JQ5 239 aa18.16■□□□□ 0.5
CCS-206ENST00000530961 ZIC5Q96T25 663 aa18.16■□□□□ 0.5
CCS-206ENST00000530961 WDR18Q9BV38 432 aa18.16■□□□□ 0.5
CCS-206ENST00000530961 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
CCS-206ENST00000530961 TESPA1A2RU30 521 aaPredicted RBP18.15■□□□□ 0.5
CCS-206ENST00000530961 MPHOSPH10O00566 681 aaKnown RBP18.15■□□□□ 0.5
CCS-206ENST00000530961 FGRP09769 529 aa18.15■□□□□ 0.5
CCS-206ENST00000530961 CETPP11597 493 aa18.15■□□□□ 0.5
CCS-206ENST00000530961 NT5C2P49902 561 aa18.15■□□□□ 0.5
CCS-206ENST00000530961 MAP4K1Q92918 833 aa18.15■□□□□ 0.5
CCS-206ENST00000530961 RNF41Q9H4P4 317 aaPredicted RBP18.15■□□□□ 0.5
CCS-206ENST00000530961 POLR2AP24928 1970 aaKnown RBP18.14■□□□□ 0.49
CCS-206ENST00000530961 AKR1B1P15121 316 aa18.14■□□□□ 0.49
CCS-206ENST00000530961 RASA1P20936 1047 aa18.14■□□□□ 0.49
CCS-206ENST00000530961 PTH1RQ03431 593 aa18.14■□□□□ 0.49
CCS-206ENST00000530961 RAB3GAP1Q15042 981 aa18.14■□□□□ 0.49
CCS-206ENST00000530961 STK11IPQ8N1F8 1099 aa18.14■□□□□ 0.49
CCS-206ENST00000530961 MYO5AQ9Y4I1 1855 aaKnown RBP18.14■□□□□ 0.49
CCS-206ENST00000530961 ORC4O43929 436 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 TRPA1O75762 1119 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 HAND2P61296 217 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 CTDSPL2Q05D32 466 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 SPP2Q13103 211 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 AKNAD1Q5T1N1 836 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 OTUD7BQ6GQQ9 843 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 MFSD6Q6ZSS7 791 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 STAG1Q8WVM7 1258 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 LSG1Q9H089 658 aaKnown RBP18.13■□□□□ 0.49
CCS-206ENST00000530961 KANSL2Q9H9L4 492 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 ANO2Q9NQ90 1003 aa18.13■□□□□ 0.49
CCS-206ENST00000530961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms