RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 UTP14CQ5TAP6 766 aaKnown RBP8.06□□□□□ -1.12
CTNND1-216ENST00000527467 SYT10Q6XYQ8 523 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 PLXNC1O60486 1568 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 EEF1DP29692 281 aaKnown RBP8.06□□□□□ -1.12
CTNND1-216ENST00000527467 ZKSCAN8Q15776 578 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-216ENST00000527467 RRAGBQ5VZM2 374 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 DUSP27Q5VZP5 1158 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 SLC12A5Q9H2X9 1139 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 MMRN2Q9H8L6 949 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 CD2APQ9Y5K6 639 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 CCDC159P0C7I6 412 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 MCM7P33993 719 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 IRX5P78411 483 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-216ENST00000527467 ZSCAN23Q3MJ62 389 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 ZNF280CQ8ND82 737 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 CCDC124Q96CT7 223 aaKnown RBP8.06□□□□□ -1.12
CTNND1-216ENST00000527467 FBXO2Q9UK22 296 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-216ENST00000527467 ABCA6Q8N139 1617 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 SPATA31A1Q5TZJ5 1347 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 CHMP4BP1P59074 171 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 GUCY1B3Q02153 619 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 RRS1Q15050 365 aaKnown RBP8.06□□□□□ -1.12
CTNND1-216ENST00000527467 GRAMD4Q6IC98 578 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 CEP19Q96LK0 163 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 IMPG2Q9BZV3 1241 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 PRKAG2Q9UGJ0 569 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 ADGRB2O60241 1585 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 MROH2AA6NES4 1674 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 E7EVH7 732 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 NOP14P78316 857 aaKnown RBP8.05□□□□□ -1.12
CTNND1-216ENST00000527467 ANKRD20A4Q4UJ75 823 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 CAVIN4Q5BKX8 364 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 ANKRD20A8PQ5CZ79 823 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 AKAP4Q5JQC9 854 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 ANKRD20A2Q5SQ80 823 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 ANKRD20A1Q5TYW2 823 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 WDR78Q5VTH9 848 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 CFAP61Q8NHU2 1237 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 RILPQ96NA2 401 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 PLCB1Q9NQ66 1216 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 DIABLOQ9NR28 239 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 KLHL14Q9P2G3 628 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 CEP126Q9P2H0 1117 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 TRMT112Q9UI30 125 aaKnown RBP8.05□□□□□ -1.12
CTNND1-216ENST00000527467 ADAMTSL3P82987 1691 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 FRMD3A2A2Y4 597 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 GOLGA6BA6NDN3 693 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 PPP1R12AO14974 1030 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-216ENST00000527467 CAPN15O75808 1086 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 POLE2P56282 527 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 RASA3Q14644 834 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 C8orf74Q6P047 294 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 IFT20Q8IY31 132 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 LRP2BPQ9P2M1 347 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 PSMA7O14818 248 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 TWISTNBQ3B726 338 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-216ENST00000527467 SLC12A7Q9Y666 1083 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 IQGAP1P46940 1657 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 ZFYVE9O95405 1425 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 KARSQ15046 597 aaKnown RBP8.05□□□□□ -1.12
CTNND1-216ENST00000527467 CCDC152Q4G0S7 254 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 TTC19Q6DKK2 380 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-216ENST00000527467 PRPF40BQ6NWY9 871 aaKnown RBP8.05□□□□□ -1.12
CTNND1-216ENST00000527467 SCOCQ9UIL1 159 aa8.05□□□□□ -1.12
CTNND1-216ENST00000527467 A0A1B0GW55 424 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 DUX4L2P0CJ85 424 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 DUX4L3P0CJ86 424 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 DUX4L4P0CJ87 422 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 DUX4L5P0CJ88 424 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 DUX4L6P0CJ89 424 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 DUX4L7P0CJ90 424 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 MTMR3Q13615 1198 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 RPS6KA2Q15349 733 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 ISM2Q6H9L7 571 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 MCM10Q7L590 875 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 RMDN2Q96LZ7 410 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 CCDC138Q96M89 665 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 MAK16Q9BXY0 300 aaKnown RBP8.04□□□□□ -1.12
CTNND1-216ENST00000527467 LZTFL1Q9NQ48 299 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 DUX4Q9UBX2 424 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 MED14O60244 1454 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 HMOX1P09601 288 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 HOXD10P28358 340 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 DZIP3Q86Y13 1208 aaKnown RBP8.04□□□□□ -1.12
CTNND1-216ENST00000527467 CCDC82Q8N4S0 544 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 NIP7Q9Y221 180 aaKnown RBP eCLIP8.04□□□□□ -1.12
CTNND1-216ENST00000527467 UTP11Q9Y3A2 253 aaKnown RBP8.04□□□□□ -1.12
CTNND1-216ENST00000527467 METP08581 1390 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 SYKP43405 635 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 ARHGAP4P98171 946 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 TNFAIP1Q13829 316 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 ANO6Q4KMQ2 910 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 IQCA1Q86XH1 822 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 RABEP2Q9H5N1 569 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.04□□□□□ -1.129e-8■□□□□ 10.6
CTNND1-216ENST00000527467 TFIP11Q9UBB9 837 aaKnown RBP8.04□□□□□ -1.12
CTNND1-216ENST00000527467 NOB1Q9ULX3 412 aaKnown RBP8.04□□□□□ -1.12
CTNND1-216ENST00000527467 RIOK3O14730 519 aaKnown RBP8.04□□□□□ -1.12
CTNND1-216ENST00000527467 TTC4O95801 387 aa8.04□□□□□ -1.12
CTNND1-216ENST00000527467 BMP15O95972 392 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms