RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 FAM163AQ96GL9 167 aaPredicted RBP17.71■□□□□ 0.43
BEST1-204ENST00000524926 PLCD1P51178 756 aa17.71■□□□□ 0.43
BEST1-204ENST00000524926 AKAP17AQ02040 695 aaKnown RBP17.71■□□□□ 0.43
BEST1-204ENST00000524926 CCDC173Q0VFZ6 552 aa17.71■□□□□ 0.43
BEST1-204ENST00000524926 TROAPQ12815 778 aa17.71■□□□□ 0.43
BEST1-204ENST00000524926 MAP3K11Q16584 847 aa17.71■□□□□ 0.43
BEST1-204ENST00000524926 LINC00301Q8NCQ3 95 aa17.71■□□□□ 0.43
BEST1-204ENST00000524926 COL11A2P13942 1736 aaPredicted RBP17.71■□□□□ 0.42
BEST1-204ENST00000524926 EYA3Q99504 573 aa17.7■□□□□ 0.42
BEST1-204ENST00000524926 POLR3EQ9NVU0 708 aa17.7■□□□□ 0.42
BEST1-204ENST00000524926 ZNF219Q9P2Y4 722 aaPredicted RBP17.7■□□□□ 0.42
BEST1-204ENST00000524926 SAFBQ15424 915 aaKnown RBP eCLIP17.7■□□□□ 0.42
BEST1-204ENST00000524926 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
BEST1-204ENST00000524926 RBM28Q9NW13 759 aaKnown RBP17.7■□□□□ 0.42
BEST1-204ENST00000524926 PCDHA7Q9UN72 937 aa17.7■□□□□ 0.42
BEST1-204ENST00000524926 KCNJ14Q9UNX9 436 aa17.7■□□□□ 0.42
BEST1-204ENST00000524926 GAKO14976 1311 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 DDAH1O94760 285 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 YEATS4O95619 227 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 ANO1Q5XXA6 986 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 CKAP2LQ8IYA6 745 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 KCNG4Q8TDN1 519 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
BEST1-204ENST00000524926 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 U2AF2P26368 475 aaKnown RBP eCLIP17.69■□□□□ 0.42
BEST1-204ENST00000524926 CHRNA5P30532 468 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 RHBDL3P58872 404 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 SLC44A5Q8NCS7 719 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
BEST1-204ENST00000524926 FUCA2Q9BTY2 467 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.69■□□□□ 0.42
BEST1-204ENST00000524926 MXD3Q9BW11 206 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 RNF26Q9BY78 433 aaPredicted RBP17.69■□□□□ 0.42
BEST1-204ENST00000524926 CLSTN2Q9H4D0 955 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 ECM29Q5VYK3 1845 aa17.69■□□□□ 0.42
BEST1-204ENST00000524926 SPTLC2O15270 562 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 PLEKHA8P1O95397 391 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 MMP1P03956 469 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 TSPY3P0CV98 308 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 TSPY8P0CW00 308 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 CCDC192P0DO97 292 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 STYK1Q6J9G0 422 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 KLHL34Q8N239 644 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 TRIM44Q96DX7 344 aaPredicted RBP17.68■□□□□ 0.42
BEST1-204ENST00000524926 TTF2Q9UNY4 1162 aaKnown RBP17.68■□□□□ 0.42
BEST1-204ENST00000524926 DAGLAQ9Y4D2 1042 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 FLT1P17948 1338 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 BTBD18B2RXH4 712 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 ADALQ6DHV7 355 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 GOLPH3LQ9H4A5 285 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 DBNDD1Q9H9R9 158 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 SUGT1Q9Y2Z0 365 aa17.68■□□□□ 0.42
BEST1-204ENST00000524926 V9GY48 417 aaPredicted RBP17.68■□□□□ 0.42
BEST1-204ENST00000524926 hCG_1642624A0A1W2PR95 340 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 DIS3L2Q8IYB7 885 aaKnown RBP17.67■□□□□ 0.42
BEST1-204ENST00000524926 FSIP1Q8NA03 581 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 KAT14Q9H8E8 782 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 ZNF287Q9HBT7 754 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 NAV1Q8NEY1 1877 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 ROBO3Q96MS0 1386 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 NT5C2P49902 561 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 RCSD1Q6JBY9 416 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 PPP1R9BQ96SB3 815 aa17.67■□□□□ 0.42
BEST1-204ENST00000524926 USP17L3A6NCW0 530 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 USP17L4A6NCW7 530 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
BEST1-204ENST00000524926 SF3B2Q13435 895 aaKnown RBP17.66■□□□□ 0.42
BEST1-204ENST00000524926 USP17L1Q7RTZ2 530 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 DLEC1Q9Y238 1755 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 XBP1P17861 261 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 SCNN1DP51172 638 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 FUT2Q10981 343 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 PICALMQ13492 652 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 TMTC3Q6ZXV5 915 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 NOSTRINQ8IVI9 506 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 MRPS27Q92552 414 aaKnown RBP17.66■□□□□ 0.42
BEST1-204ENST00000524926 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
BEST1-204ENST00000524926 GOLGB1Q14789 3259 aaKnown RBP17.65■□□□□ 0.42
BEST1-204ENST00000524926 FAM160A1Q05DH4 1040 aa17.65■□□□□ 0.42
BEST1-204ENST00000524926 PODNQ7Z5L7 613 aa17.65■□□□□ 0.42
BEST1-204ENST00000524926 MYH6P13533 1939 aa17.65■□□□□ 0.42
BEST1-204ENST00000524926 A0A1B0GVL5 298 aa17.64■□□□□ 0.42
BEST1-204ENST00000524926 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.42
BEST1-204ENST00000524926 CDK8P49336 464 aa17.64■□□□□ 0.42
BEST1-204ENST00000524926 SNW1Q13573 536 aaKnown RBP17.64■□□□□ 0.42
BEST1-204ENST00000524926 SLC39A14Q15043 492 aa17.64■□□□□ 0.42
BEST1-204ENST00000524926 PKN1Q16512 942 aa17.64■□□□□ 0.42
BEST1-204ENST00000524926 CCDC178Q5BJE1 867 aa17.64■□□□□ 0.42
BEST1-204ENST00000524926 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.42
BEST1-204ENST00000524926 KCNQ5Q9NR82 932 aa17.64■□□□□ 0.42
BEST1-204ENST00000524926 VPS54Q9P1Q0 977 aa17.64■□□□□ 0.42
BEST1-204ENST00000524926 CDK5RAP2Q96SN8 1893 aa17.64■□□□□ 0.42
BEST1-204ENST00000524926 A0A1W2PQ27 194 aa17.64■□□□□ 0.41
BEST1-204ENST00000524926 A0A1W2PQ64 194 aa17.64■□□□□ 0.41
BEST1-204ENST00000524926 A0A1W2PQD8 194 aa17.64■□□□□ 0.41
BEST1-204ENST00000524926 KINO60870 393 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms