RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 APOBEC3HQ6NTF7 200 aaKnown RBP8.4□□□□□ -1.06
VPS11-201ENST00000524454 FBXL16Q8N461 479 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 SPATA5Q8NB90 893 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 AIDAQ96BJ3 306 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 CLMNQ96JQ2 1002 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 ZSCAN31Q96LW9 406 aaPredicted RBP8.4□□□□□ -1.06
VPS11-201ENST00000524454 ZDHHC15Q96MV8 337 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 GBP4Q96PP9 640 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 IL25Q9H293 177 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 WBP1LQ9NX94 342 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 PALD1Q9ULE6 856 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 LHX6Q9UPM6 363 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 CDK5RAP2Q96SN8 1893 aa8.4□□□□□ -1.07
VPS11-201ENST00000524454 MYH7P12883 1935 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 MAST3O60307 1309 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 SALL1Q9NSC2 1324 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 POTEMA6NI47 508 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 MAP4K4O95819 1239 aaPredicted RBP8.39□□□□□ -1.07
VPS11-201ENST00000524454 CYP2E1P05181 493 aaPredicted RBP8.39□□□□□ -1.07
VPS11-201ENST00000524454 SLC10A3P09131 477 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 LBX1P52954 281 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 KIF23Q02241 960 aaPredicted RBP8.39□□□□□ -1.07
VPS11-201ENST00000524454 MECOMQ03112 1051 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 TCP10Q12799 353 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 UBE3CQ15386 1083 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 CREB3L3Q68CJ9 461 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 POTEGQ6S5H5 508 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 HHIPL2Q6UWX4 724 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 DZIP1Q86YF9 867 aaKnown RBP8.39□□□□□ -1.07
VPS11-201ENST00000524454 ZNF384Q8TF68 577 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 HHIPL1Q96JK4 782 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 FAM227BQ96M60 508 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 SLKQ9H2G2 1235 aaPredicted RBP8.39□□□□□ -1.07
VPS11-201ENST00000524454 CTNNA3Q9UI47 895 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 RBM8AQ9Y5S9 174 aaKnown RBP8.39□□□□□ -1.07
VPS11-201ENST00000524454 CYP46A1Q9Y6A2 500 aa8.39□□□□□ -1.07
VPS11-201ENST00000524454 FAM205CA6NFA0 338 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 GOLIM4O00461 696 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 SLURP2P0DP57 97 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 HSPA8P11142 646 aaKnown RBP8.38□□□□□ -1.07
VPS11-201ENST00000524454 ZAP70P43403 619 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 NT5C2P49902 561 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 FKBP1BP68106 108 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 HDLBPQ00341 1268 aaKnown RBP8.38□□□□□ -1.07
VPS11-201ENST00000524454 MAP2K1Q02750 393 aaPredicted RBP8.38□□□□□ -1.07
VPS11-201ENST00000524454 NFIAQ12857 509 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 CDC42EP5Q6NZY7 148 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 RUFY3Q7L099 469 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 ARMC9Q7Z3E5 817 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 ZFPM1Q8IX07 1006 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 APPBP2Q92624 585 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 TMX3Q96JJ7 454 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 TEPSINQ96N21 525 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 DNAJC2Q99543 621 aaKnown RBP8.38□□□□□ -1.07
VPS11-201ENST00000524454 USP40Q9NVE5 1235 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 RAI14Q9P0K7 980 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 LIMCH1Q9UPQ0 1083 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 SUGT1Q9Y2Z0 365 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.38□□□□□ -1.07
VPS11-201ENST00000524454 PPP2R3BQ9Y5P8 575 aa8.38□□□□□ -1.07
VPS11-201ENST00000524454 CASP8AP2Q9UKL3 1982 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 WDR19Q8NEZ3 1342 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 SLC27A2O14975 620 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 USP2O75604 605 aaPredicted RBP8.37□□□□□ -1.07
VPS11-201ENST00000524454 MAP2K2P36507 400 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 BTDP43251 543 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 TNNI2P48788 182 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 PTH1RQ03431 593 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 NOGQ13253 232 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 PICALMQ13492 652 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 TNFAIP1Q13829 316 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
VPS11-201ENST00000524454 VARS2Q5ST30 1063 aaKnown RBP8.37□□□□□ -1.07
VPS11-201ENST00000524454 RGS22Q8NE09 1264 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 CCDC102AQ96A19 550 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 HS3ST6Q96QI5 342 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 PIH1D3Q9NQM4 214 aaKnown RBP8.37□□□□□ -1.07
VPS11-201ENST00000524454 TMOD2Q9NZR1 351 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 LAMB1P07942 1786 aa8.37□□□□□ -1.07
VPS11-201ENST00000524454 LAMA4Q16363 1823 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 FOCADQ5VW36 1801 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 MROH7-TTC4A0A0A0MT08 1334 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 GAKO14976 1311 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 GOLGA6L22H0YM25 854 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 PPP1R12BO60237 982 aaPredicted RBP8.36□□□□□ -1.07
VPS11-201ENST00000524454 GNAT2P19087 354 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 CASTP20810 708 aaKnown RBP8.36□□□□□ -1.07
VPS11-201ENST00000524454 MCM4P33991 863 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 ADD2P35612 726 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 GJA5P36382 358 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 CTCFP49711 727 aaPredicted RBP8.36□□□□□ -1.07
VPS11-201ENST00000524454 SUPT20HL1Q3ZLR7 823 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 LDLRAD1Q5T700 205 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 SPTY2D1Q68D10 685 aaPredicted RBP8.36□□□□□ -1.07
VPS11-201ENST00000524454 BLOC1S2Q6QNY1 142 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 MIGA2Q7L4E1 593 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 ADGRA1Q86SQ6 560 aa8.36□□□□□ -1.07
VPS11-201ENST00000524454 ZNF589Q86UQ0 364 aaPredicted RBP8.36□□□□□ -1.07
VPS11-201ENST00000524454 ZGPATQ8N5A5 531 aaKnown RBP8.36□□□□□ -1.07
VPS11-201ENST00000524454 NSUN4Q96CB9 384 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms