RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
BRF2-204ENST00000522539 NEUROD6Q96NK8 337 aa15.16■□□□□ 0.02
BRF2-204ENST00000522539 NUDT12Q9BQG2 462 aa15.16■□□□□ 0.02
BRF2-204ENST00000522539 RAI14Q9P0K7 980 aa15.16■□□□□ 0.02
BRF2-204ENST00000522539 RBPJLQ9UBG7 517 aa15.16■□□□□ 0.02
BRF2-204ENST00000522539 STXBP5LQ9Y2K9 1186 aa15.16■□□□□ 0.02
BRF2-204ENST00000522539 SYN1P17600 705 aa15.15■□□□□ 0.02
BRF2-204ENST00000522539 CYP2B6P20813 491 aa15.15■□□□□ 0.02
BRF2-204ENST00000522539 MAPK4P31152 587 aa15.15■□□□□ 0.02
BRF2-204ENST00000522539 RARSP54136 660 aaKnown RBP15.15■□□□□ 0.02
BRF2-204ENST00000522539 IRX3P78415 501 aaPredicted RBP15.15■□□□□ 0.02
BRF2-204ENST00000522539 MORN1Q5T089 497 aa15.15■□□□□ 0.02
BRF2-204ENST00000522539 LHX8Q68G74 356 aa15.15■□□□□ 0.02
BRF2-204ENST00000522539 FOXP4Q8IVH2 680 aaPredicted RBP15.15■□□□□ 0.02
BRF2-204ENST00000522539 MTMR10Q9NXD2 777 aa15.15■□□□□ 0.02
BRF2-204ENST00000522539 PEX10O60683 326 aa15.14■□□□□ 0.01
BRF2-204ENST00000522539 IGSF3O75054 1194 aa15.14■□□□□ 0.01
BRF2-204ENST00000522539 UQCRFS1P1P0C7P4 283 aa15.14■□□□□ 0.01
BRF2-204ENST00000522539 CACNB2Q08289 660 aaPredicted RBP15.14■□□□□ 0.01
BRF2-204ENST00000522539 Q3C1V9 767 aa15.14■□□□□ 0.01
BRF2-204ENST00000522539 TMOD4Q9NZQ9 345 aa15.14■□□□□ 0.01
BRF2-204ENST00000522539 LRP2BPQ9P2M1 347 aa15.14■□□□□ 0.01
BRF2-204ENST00000522539 FLT1P17948 1338 aa15.14■□□□□ 0.01
BRF2-204ENST00000522539 MAST2Q6P0Q8 1798 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 FOCADQ5VW36 1801 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 USP17L10C9JJH3 530 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 BAG3O95817 575 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 PLCG2P16885 1265 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 ERVK-9P63128 1117 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 ERVK-24P63145 666 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 SHROOM1Q2M3G4 852 aaPredicted RBP15.13■□□□□ 0.01
BRF2-204ENST00000522539 GORABQ5T7V8 394 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 Q7L0L9 218 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 GPR142Q7Z601 462 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 ADGRA1Q86SQ6 560 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 GTF3C2Q8WUA4 911 aaPredicted RBP15.13■□□□□ 0.01
BRF2-204ENST00000522539 CDK5RAP2Q96SN8 1893 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 PORCNQ9H237 461 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 AATFQ9NY61 560 aaKnown RBP eCLIP15.13■□□□□ 0.01
BRF2-204ENST00000522539 ZBTB21Q9ULJ3 1066 aa15.13■□□□□ 0.01
BRF2-204ENST00000522539 UNC80Q8N2C7 3258 aa15.12■□□□□ 0.01
BRF2-204ENST00000522539 PNMA6EA0A0J9YXQ4 647 aa15.12■□□□□ 0.01
BRF2-204ENST00000522539 ZKSCAN1P17029 563 aaPredicted RBP15.12■□□□□ 0.01
BRF2-204ENST00000522539 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
BRF2-204ENST00000522539 ZNF512BQ96KM6 892 aaPredicted RBP15.12■□□□□ 0.01
BRF2-204ENST00000522539 GPR108Q9NPR9 543 aa15.12■□□□□ 0.01
BRF2-204ENST00000522539 EMILIN3Q9NT22 766 aa15.12■□□□□ 0.01
BRF2-204ENST00000522539 CCND3P30281 292 aaPredicted RBP15.11■□□□□ 0.01
BRF2-204ENST00000522539 RGS2P41220 211 aa15.11■□□□□ 0.01
BRF2-204ENST00000522539 PDE3AQ14432 1141 aa15.11■□□□□ 0.01
BRF2-204ENST00000522539 CCL14Q16627 93 aa15.11■□□□□ 0.01
BRF2-204ENST00000522539 LRRC26Q2I0M4 334 aa15.11■□□□□ 0.01
BRF2-204ENST00000522539 NAA16Q6N069 864 aaPredicted RBP15.11■□□□□ 0.01
BRF2-204ENST00000522539 PLEKHH3Q7Z736 793 aa15.11■□□□□ 0.01
BRF2-204ENST00000522539 MAPKAPK5Q8IW41 473 aa15.11■□□□□ 0.01
BRF2-204ENST00000522539 C12orf42Q96LP6 360 aa15.11■□□□□ 0.01
BRF2-204ENST00000522539 APBA2Q99767 749 aa15.11■□□□□ 0.01
BRF2-204ENST00000522539 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
BRF2-204ENST00000522539 UBE2OQ9C0C9 1292 aaKnown RBP15.11■□□□□ 0.01
BRF2-204ENST00000522539 PALD1Q9ULE6 856 aa15.11■□□□□ 0.01
BRF2-204ENST00000522539 CNMDO75829 334 aa15.1■□□□□ 0.01
BRF2-204ENST00000522539 GDF11O95390 407 aa15.1■□□□□ 0.01
BRF2-204ENST00000522539 IGHA2P01877 340 aa15.1■□□□□ 0.01
BRF2-204ENST00000522539 GNAI2P04899 355 aa15.1■□□□□ 0.01
BRF2-204ENST00000522539 CYP2E1P05181 493 aaPredicted RBP15.1■□□□□ 0.01
BRF2-204ENST00000522539 G3BP1Q13283 466 aaKnown RBP eCLIP15.1■□□□□ 0.01
BRF2-204ENST00000522539 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 TRIM27P14373 513 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 POLA2Q14181 598 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 TNNI3KQ59H18 835 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 FAM109BQ6ICB4 259 aaPredicted RBP15.09■□□□□ 0.01
BRF2-204ENST00000522539 TATDN1Q6P1N9 297 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 USP17L2Q6R6M4 530 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 LBX2Q6XYB7 198 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 CRACR2BQ8N4Y2 399 aaPredicted RBP15.09■□□□□ 0.01
BRF2-204ENST00000522539 SNRKQ9NRH2 765 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 RABGAP1Q9Y3P9 1069 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 FPGT-TNNI3KV9GXZ4 949 aa15.09■□□□□ 0.01
BRF2-204ENST00000522539 FRMPD3Q5JV73 1810 aa15.08■□□□□ 0.01
BRF2-204ENST00000522539 HOXC6P09630 235 aa15.08■□□□□ 0
BRF2-204ENST00000522539 MAP2K5Q13163 448 aa15.08■□□□□ 0
BRF2-204ENST00000522539 DBNDD2Q9BQY9 259 aa15.08■□□□□ 0
BRF2-204ENST00000522539 PAGR1Q9BTK6 254 aa15.08■□□□□ 0
BRF2-204ENST00000522539 HLA-DOAP06340 250 aa15.07■□□□□ 0
BRF2-204ENST00000522539 CCDC158Q5M9N0 1113 aa15.07■□□□□ 0
BRF2-204ENST00000522539 TTC39AQ5SRH9 613 aa15.07■□□□□ 0
BRF2-204ENST00000522539 EDC3Q96F86 508 aaKnown RBP15.07■□□□□ 0
BRF2-204ENST00000522539 EHD4Q9H223 541 aa15.07■□□□□ 0
BRF2-204ENST00000522539 FLRT1Q9NZU1 646 aa15.07■□□□□ 0
BRF2-204ENST00000522539 LAMA2P24043 3122 aaKnown RBP15.06■□□□□ 0
BRF2-204ENST00000522539 MYO5AQ9Y4I1 1855 aaKnown RBP15.06■□□□□ 0
BRF2-204ENST00000522539 SLC15A5A6NIM6 579 aa15.06■□□□□ 0
BRF2-204ENST00000522539 USP17L15C9J2P7 530 aa15.06■□□□□ 0
BRF2-204ENST00000522539 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
BRF2-204ENST00000522539 USP17L11C9JVI0 530 aa15.06■□□□□ 0
BRF2-204ENST00000522539 USP17L18D6R9N7 530 aa15.06■□□□□ 0
BRF2-204ENST00000522539 USP17L22D6RA61 530 aa15.06■□□□□ 0
BRF2-204ENST00000522539 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
BRF2-204ENST00000522539 USP17L19D6RCP7 530 aa15.06■□□□□ 0
BRF2-204ENST00000522539 USP17L20D6RJB6 530 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms