RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
MRPS28-208ENST00000521605 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
MRPS28-208ENST00000521605 CDH23Q9H251 3354 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 ERC2O15083 957 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 SMARCA5O60264 1052 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-208ENST00000521605 SLURP2P0DP57 97 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 SDSP20132 328 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 CYP2B6P20813 491 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-208ENST00000521605 G3BP1Q13283 466 aaKnown RBP eCLIP13.09□□□□□ -0.31
MRPS28-208ENST00000521605 BECN1Q14457 450 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 FAM110CQ1W6H9 321 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
MRPS28-208ENST00000521605 GPATCH3Q96I76 525 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 MRIQ9BWK5 157 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 FAM198AQ9UFP1 575 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 MUC3AQ02505 3323 aa13.09□□□□□ -0.31
MRPS28-208ENST00000521605 PHF20L1A8MW92 1017 aa13.08□□□□□ -0.32
MRPS28-208ENST00000521605 GLRX3O76003 335 aaKnown RBP13.08□□□□□ -0.32
MRPS28-208ENST00000521605 METTL24Q5JXM2 366 aa13.08□□□□□ -0.32
MRPS28-208ENST00000521605 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
MRPS28-208ENST00000521605 SEMA6BQ9H3T3 888 aa13.08□□□□□ -0.32
MRPS28-208ENST00000521605 USP40Q9NVE5 1235 aa13.08□□□□□ -0.32
MRPS28-208ENST00000521605 GJD2Q9UKL4 321 aa13.08□□□□□ -0.32
MRPS28-208ENST00000521605 PNMA3Q9UL41 463 aa13.08□□□□□ -0.32
MRPS28-208ENST00000521605 AGTPBP1Q9UPW5 1226 aa13.08□□□□□ -0.32
MRPS28-208ENST00000521605 DOCK2Q92608 1830 aa13.08□□□□□ -0.32
MRPS28-208ENST00000521605 MROH5Q6ZUA9 1318 aa13.08□□□□□ -0.32
MRPS28-208ENST00000521605 PTPRFP10586 1907 aa13.07□□□□□ -0.32
MRPS28-208ENST00000521605 CIAO1O76071 339 aa13.07□□□□□ -0.32
MRPS28-208ENST00000521605 REC8O95072 547 aa13.07□□□□□ -0.32
MRPS28-208ENST00000521605 COL6A1P12109 1028 aa13.07□□□□□ -0.32
MRPS28-208ENST00000521605 FOSL2P15408 326 aa13.07□□□□□ -0.32
MRPS28-208ENST00000521605 LRRC24Q50LG9 513 aa13.07□□□□□ -0.32
MRPS28-208ENST00000521605 ZSCAN29Q8IWY8 852 aaPredicted RBP13.07□□□□□ -0.32
MRPS28-208ENST00000521605 PI4K2BQ8TCG2 481 aa13.07□□□□□ -0.32
MRPS28-208ENST00000521605 IL17RAQ96F46 866 aa13.07□□□□□ -0.32
MRPS28-208ENST00000521605 SUGT1Q9Y2Z0 365 aa13.07□□□□□ -0.32
MRPS28-208ENST00000521605 TNFRSF10AO00220 468 aa13.06□□□□□ -0.32
MRPS28-208ENST00000521605 OS9Q13438 667 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-208ENST00000521605 ECHDC1Q9NTX5 307 aa13.06□□□□□ -0.32
MRPS28-208ENST00000521605 DNAH12Q6ZR08 3092 aa13.06□□□□□ -0.32
MRPS28-208ENST00000521605 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
MRPS28-208ENST00000521605 ATRNL1Q5VV63 1379 aa13.06□□□□□ -0.32
MRPS28-208ENST00000521605 TMEM265A0A087WTH1 108 aa13.05□□□□□ -0.32
MRPS28-208ENST00000521605 CCND3P30281 292 aaPredicted RBP13.05□□□□□ -0.32
MRPS28-208ENST00000521605 SNX21Q969T3 373 aa13.05□□□□□ -0.32
MRPS28-208ENST00000521605 TTYH1Q9H313 450 aaPredicted RBP13.05□□□□□ -0.32
MRPS28-208ENST00000521605 TTC28Q96AY4 2481 aa13.05□□□□□ -0.32
MRPS28-208ENST00000521605 RFX7Q2KHR2 1363 aa13.05□□□□□ -0.32
MRPS28-208ENST00000521605 PLXNB2O15031 1838 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 PHIPQ8WWQ0 1821 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 APBB1O00213 710 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 PEX10O60683 326 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 PDE8BO95263 885 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 PRDX5P30044 214 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 PLA2G5P39877 138 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-208ENST00000521605 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-208ENST00000521605 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-208ENST00000521605 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
MRPS28-208ENST00000521605 SHHQ15465 462 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 MAP3K21Q5TCX8 1036 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 FAM122AQ96E09 287 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 SENP6Q9GZR1 1112 aaPredicted RBP13.04□□□□□ -0.32
MRPS28-208ENST00000521605 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
MRPS28-208ENST00000521605 CTNND1O60716 968 aaKnown RBP13.03□□□□□ -0.32
MRPS28-208ENST00000521605 IFIT2P09913 472 aaKnown RBP13.03□□□□□ -0.32
MRPS28-208ENST00000521605 ZKSCAN1P17029 563 aaPredicted RBP13.03□□□□□ -0.32
MRPS28-208ENST00000521605 CACNB2Q08289 660 aaPredicted RBP13.03□□□□□ -0.32
MRPS28-208ENST00000521605 SPP2Q13103 211 aa13.03□□□□□ -0.32
MRPS28-208ENST00000521605 TJAP1Q5JTD0 557 aa13.03□□□□□ -0.32
MRPS28-208ENST00000521605 C9orf50Q5SZB4 431 aa13.03□□□□□ -0.32
MRPS28-208ENST00000521605 SH3BP5LQ7L8J4 393 aa13.03□□□□□ -0.32
MRPS28-208ENST00000521605 WDR66Q8TBY9 1149 aa13.03□□□□□ -0.32
MRPS28-208ENST00000521605 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
MRPS28-208ENST00000521605 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
MRPS28-208ENST00000521605 MYH13Q9UKX3 1938 aa13.03□□□□□ -0.32
MRPS28-208ENST00000521605 MAST2Q6P0Q8 1798 aa13.02□□□□□ -0.32
MRPS28-208ENST00000521605 DDTLA6NHG4 134 aaPredicted RBP13.02□□□□□ -0.33
MRPS28-208ENST00000521605 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 HIP1O00291 1037 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 IFIT1P09914 478 aaKnown RBP13.02□□□□□ -0.33
MRPS28-208ENST00000521605 CHMLP26374 656 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 HMGCS2P54868 508 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 ANAPC15P60006 121 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 PICALMQ13492 652 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 CCL14Q16627 93 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 LHX8Q68G74 356 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 VGLL2Q8N8G2 317 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 PROCA1Q8NCQ7 364 aaPredicted RBP13.02□□□□□ -0.33
MRPS28-208ENST00000521605 KLHDC4Q8TBB5 520 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 NUDT12Q9BQG2 462 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 USP26Q9BXU7 913 aa13.02□□□□□ -0.33
MRPS28-208ENST00000521605 ASCC2Q9H1I8 757 aaPredicted RBP13.02□□□□□ -0.33
MRPS28-208ENST00000521605 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.33
MRPS28-208ENST00000521605 EYA2O00167 538 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms