RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SH2B2O14492 632 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 GUCY1A2P33402 732 aa14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 NOA1Q8NC60 698 aaKnown RBP14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 DIP2BQ9P265 1576 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 SPATA1Q5VX52 437 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 FAM71BQ8TC56 605 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 CABLES1Q8TDN4 633 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 EPSTI1Q96J88 318 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 TEX13AQ9BXU3 409 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 EIF5P55010 431 aaKnown RBP14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 UBXN1Q04323 297 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 ZNF174Q15697 407 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 UBN2Q6ZU65 1347 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 TMEM87BQ96K49 555 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 PANX2Q96RD6 677 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 ZNF532Q9HCE3 1301 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 GPR108Q9NPR9 543 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 MFAP3LO75121 409 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 CCDC122Q5T0U0 273 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 KRT28Q7Z3Y7 464 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 TMTC1Q8IUR5 882 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 RIN2Q8WYP3 895 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 EEF2KMTQ96G04 330 aa14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 NAA15Q9BXJ9 866 aaKnown RBP14.51□□□□□ -0.09
TRAPPC9-208ENST00000520857 GPIHBP1Q8IV16 184 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 H7C1W4 665 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 FXR1P51114 621 aaKnown RBP eCLIP14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 TBX2Q13207 712 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 E2F4Q16254 413 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 WHAMMP3Q1A5X7 153 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 EFCC1Q9HA90 598 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 BRMS1Q9HCU9 246 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 MKRN1Q9UHC7 482 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 RANBP6O60518 1105 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 PTPREP23469 700 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 NR1I3Q14994 352 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 CYP26C1Q6V0L0 522 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 GSPT2Q8IYD1 628 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 PPM1EQ8WY54 764 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 MAP3K14Q99558 947 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 VPS54Q9P1Q0 977 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 L1RE1Q9UN81 338 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 JRKLQ9Y4A0 524 aa14.5□□□□□ -0.09
TRAPPC9-208ENST00000520857 FMN2Q9NZ56 1722 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 SRGAP2O75044 1071 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 MBD4O95243 580 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 DCAF5Q96JK2 942 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 NACAP1Q9BZK3 213 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 ZNHIT6Q9NWK9 470 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 HDAC6Q9UBN7 1215 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 CCDC196A0A1B0GTZ2 297 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 NAP1L1P55209 391 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 STIM1Q13586 685 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 MORC3Q14149 939 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 OXER1Q8TDS5 423 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 PSD3Q9NYI0 1048 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 MTMR7Q9Y216 660 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 DIP2AQ14689 1571 aa14.49□□□□□ -0.09
TRAPPC9-208ENST00000520857 IBSPP21815 317 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 ERCC5P28715 1186 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 LIG3P49916 1009 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 DNA2P51530 1060 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 TTC19Q6DKK2 380 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 TRIML1Q8N9V2 468 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 ARMT1Q9H993 441 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 ZSWIM5Q9P217 1185 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 MAGEC2Q9UBF1 373 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 TRIM10Q9UDY6 481 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 MACROD2A1Z1Q3 448 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 MAP2K7O14733 419 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 ABL1P00519 1130 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 MMP1P03956 469 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 MNAT1P51948 309 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 A0A1B0GTH6 734 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 PRDM1O75626 825 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 ZNF18P17022 549 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 MAGEA9P43362 315 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 ICE2Q659A1 982 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 MAGEB6Q8N7X4 407 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 MIGA1Q8NAN2 632 aa14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 GNL3LQ9NVN8 582 aaKnown RBP14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 CHD2O14647 1828 aaKnown RBP14.48□□□□□ -0.09
TRAPPC9-208ENST00000520857 CCT5P48643 541 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 PPARDQ03181 441 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 TUBB2AQ13885 445 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 FAM76AQ8TAV0 307 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 SYMPKQ92797 1274 aaKnown RBP14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 PSMB7Q99436 277 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 TUBB2BQ9BVA1 445 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 MED4Q9NPJ6 270 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 SETD1AO15047 1707 aaKnown RBP14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 LRRIQ3A6PVS8 624 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 TUBB4BP68371 445 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 MRPS25P82663 173 aaKnown RBP14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 FBXO2Q9UK22 296 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 TFR2Q9UP52 801 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 LUC7L2Q9Y383 392 aaKnown RBP14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 NWD1Q149M9 1564 aa14.47□□□□□ -0.09
TRAPPC9-208ENST00000520857 AGLP35573 1532 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms