RNA–Protein interactions for RNA: ENST00000520808.6

NPIPB4-205, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-205ENST00000520808 LSG1Q9H089 658 aaKnown RBP6.65□□□□□ -1.34
NPIPB4-205ENST00000520808 ZNF395Q9H8N7 513 aaPredicted RBP6.65□□□□□ -1.34
NPIPB4-205ENST00000520808 PA2G4Q9UQ80 394 aaKnown RBP6.65□□□□□ -1.34
NPIPB4-205ENST00000520808 NIP7Q9Y221 180 aaKnown RBP eCLIP6.65□□□□□ -1.34
NPIPB4-205ENST00000520808 PCNTO95613 3336 aa6.65□□□□□ -1.35
NPIPB4-205ENST00000520808 RFX7Q2KHR2 1363 aa6.65□□□□□ -1.35
NPIPB4-205ENST00000520808 TOGARAM1Q9Y4F4 1720 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 TCHHQ07283 1943 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 SASH1O94885 1247 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 MAP4K4O95819 1239 aaPredicted RBP6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 CYP4F22Q6NT55 531 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 CWC27Q6UX04 472 aaKnown RBP6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 USP50Q70EL3 339 aaPredicted RBP6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 CCDC191Q8NCU4 936 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 RPGRQ92834 1020 aaKnown RBP6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 KCNB2Q92953 911 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 EAF2Q96CJ1 260 aaPredicted RBP6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 TRIM34Q9BYJ4 488 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 NYXQ9GZU5 481 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 GZF1Q9H116 711 aaPredicted RBP6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 GPR108Q9NPR9 543 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 SNRKQ9NRH2 765 aa6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 CWC25Q9NXE8 425 aaPredicted RBP6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 DDX49Q9Y6V7 483 aaKnown RBP6.64□□□□□ -1.35
NPIPB4-205ENST00000520808 H7C1W4 665 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 ERVH48-1M5A8F1 160 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 FZD9O00144 591 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 MBD3O95983 291 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 ATP5JP18859 108 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 ADD1P35611 737 aaKnown RBP6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 KCNJ4P48050 445 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 RGS19P49795 217 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 KRT76Q01546 638 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 DGKZQ13574 1117 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 ANKRD1Q15327 319 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 NBPF20Q3BBV1 942 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 VPS53Q5VIR6 699 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 MCTP1Q6DN14 999 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 CCDC171Q6TFL3 1326 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 UBE3BQ7Z3V4 1068 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 NIM1KQ8IY84 436 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 ZGPATQ8N5A5 531 aaKnown RBP6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 CCDC155Q8N6L0 562 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 ANP32BQ92688 251 aaKnown RBP6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 RBM17Q96I25 401 aaKnown RBP6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 FSD1Q9BTV5 496 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 SPEF2Q9C093 1822 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 TNRC6CQ9HCJ0 1690 aaKnown RBP6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 SH2B1Q9NRF2 756 aaPredicted RBP6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 HMG20BQ9P0W2 317 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 PALD1Q9ULE6 856 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 LIMCH1Q9UPQ0 1083 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 ATP6V1DQ9Y5K8 247 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 SNX14Q9Y5W7 946 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 CYP46A1Q9Y6A2 500 aa6.63□□□□□ -1.35
NPIPB4-205ENST00000520808 KIF13BQ9NQT8 1826 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 ZNF541Q9H0D2 1346 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 LILRA1O75019 489 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 CAMTA2O94983 1202 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 CELF2O95319 508 aaKnown RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 BRD1O95696 1058 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 NCLP19338 710 aaKnown RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 IL15P40933 162 aaPredicted RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 RFX5P48382 616 aaPredicted RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 PTPN12Q05209 780 aaKnown RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 KRT32Q14532 448 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 LRRFIP1Q32MZ4 808 aaKnown RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 TNNI3KQ59H18 835 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 PNMA1Q8ND90 353 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 SUPT20HQ8NEM7 779 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 C7orf43Q8WVR3 580 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 MAP4K1Q92918 833 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 SYAP1Q96A49 352 aaPredicted RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 PCMTD1Q96MG8 357 aaPredicted RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 TTC14Q96N46 770 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 PSMD1Q99460 953 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 UPF3BQ9BZI7 483 aaKnown RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 MCOLN1Q9GZU1 580 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 CCDC8Q9H0W5 538 aaPredicted RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 SIL1Q9H173 461 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 BOLA2Q9H3K6 86 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 GRPEL1Q9HAV7 217 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 POLMQ9NP87 494 aaPredicted RBP6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 FPGT-TNNI3KV9GXZ4 949 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 ARFGEF1Q9Y6D6 1849 aa6.62□□□□□ -1.35
NPIPB4-205ENST00000520808 MYH3P11055 1940 aa6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 SLC35F4A4IF30 521 aa6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 ESPNB1AK53 854 aa6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 ATP5J2-PTCD1G3V325 749 aa6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 H7C1D1 291 aa6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 CIAO1O76071 339 aa6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 XRCC6P12956 609 aaKnown RBP eCLIP6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 CASTP20810 708 aaKnown RBP6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 EPS15P42566 896 aa6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 CASP7P55210 303 aa6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 ZNF445P59923 1031 aa6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 TRIM28Q13263 835 aaKnown RBP6.61□□□□□ -1.35
NPIPB4-205ENST00000520808 NMIQ13287 307 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms