RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 KCNV2Q8TDN2 545 aa6.23□□□□□ -1.41
SDCBP-207ENST00000520168 TBC1D22AQ8WUA7 517 aa6.23□□□□□ -1.41
SDCBP-207ENST00000520168 ZKSCAN4Q969J2 545 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-207ENST00000520168 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.23□□□□□ -1.418e-21■■■■■ 43.8
SDCBP-207ENST00000520168 C11orf49Q9H6J7 331 aa6.23□□□□□ -1.41
SDCBP-207ENST00000520168 MYH16Q9H6N6 1097 aa6.23□□□□□ -1.41
SDCBP-207ENST00000520168 ZMYND8Q9ULU4 1186 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-207ENST00000520168 MAP3K2Q9Y2U5 619 aa6.23□□□□□ -1.41
SDCBP-207ENST00000520168 AOX1Q06278 1338 aa6.23□□□□□ -1.41
SDCBP-207ENST00000520168 PLXNB2O15031 1838 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 ATAD5Q96QE3 1844 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 TNFRSF10AO00220 468 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 NR1I2O75469 434 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 ADH1BP00325 375 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 IGKV5-2P06315 115 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 CSF1RP07333 972 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 CFHP08603 1231 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 CALD1Q05682 793 aaKnown RBP6.22□□□□□ -1.41
SDCBP-207ENST00000520168 NOL9Q5SY16 702 aaKnown RBP6.22□□□□□ -1.41
SDCBP-207ENST00000520168 CCDC30Q5VVM6 783 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 KSR2Q6VAB6 950 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 LIAT1Q6ZQX7 453 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 MAFAQ8NHW3 353 aaPredicted RBP6.22□□□□□ -1.41
SDCBP-207ENST00000520168 TEKT1Q969V4 418 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 FAM122AQ96E09 287 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 MRIQ9BWK5 157 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 HMX1Q9NP08 348 aaPredicted RBP6.22□□□□□ -1.41
SDCBP-207ENST00000520168 GABRQQ9UN88 632 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 SUGT1Q9Y2Z0 365 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 GTF3C3Q9Y5Q9 886 aa6.22□□□□□ -1.41
SDCBP-207ENST00000520168 TTC28Q96AY4 2481 aa6.21□□□□□ -1.41
SDCBP-207ENST00000520168 NEURL1BA8MQ27 555 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 H7C1W4 665 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 GDF9O60383 454 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 ELNP15502 786 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 SYN1P17600 705 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 IFIT5Q13325 482 aaKnown RBP6.21□□□□□ -1.42
SDCBP-207ENST00000520168 UBE4AQ14139 1066 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 NEUROD2Q15784 382 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 UBE3BQ7Z3V4 1068 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 TDRD7Q8NHU6 1098 aaKnown RBP6.21□□□□□ -1.42
SDCBP-207ENST00000520168 CCER1Q8TC90 406 aaPredicted RBP6.21□□□□□ -1.42
SDCBP-207ENST00000520168 SMCR8Q8TEV9 937 aaPredicted RBP6.21□□□□□ -1.42
SDCBP-207ENST00000520168 DIS3LQ8TF46 1054 aaKnown RBP6.21□□□□□ -1.42
SDCBP-207ENST00000520168 JARID2Q92833 1246 aaPredicted RBP6.21□□□□□ -1.42
SDCBP-207ENST00000520168 ZDHHC15Q96MV8 337 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 MBIPQ9NS73 344 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 ZNF112Q9UJU3 913 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 OGDHLQ9ULD0 1010 aa6.21□□□□□ -1.42
SDCBP-207ENST00000520168 TMEM265A0A087WTH1 108 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 A0A0G2JLL6 359 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-207ENST00000520168 PI4KAP2A4QPH2 592 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 TAF5LO75529 589 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 CYP2C8P10632 490 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 HIBADHP31937 336 aaKnown RBP6.2□□□□□ -1.42
SDCBP-207ENST00000520168 GNAI1P63096 354 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 MOGSQ13724 837 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 GCKRQ14397 625 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 FAM110CQ1W6H9 321 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 HHIPL2Q6UWX4 724 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 PRRT2Q7Z6L0 340 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-207ENST00000520168 TRMT44Q8IYL2 757 aaKnown RBP6.2□□□□□ -1.42
SDCBP-207ENST00000520168 PI4KAP1Q8N8J0 262 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 RUNDC1Q96C34 613 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 LBHD1Q9BQE6 289 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-207ENST00000520168 STK31Q9BXU1 1019 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 SLC6A16Q9GZN6 736 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 IFT57Q9NWB7 429 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 RLFQ13129 1914 aa6.2□□□□□ -1.42
SDCBP-207ENST00000520168 FAM187AA6NFU0 413 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 ZNF853P0CG23 659 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 COL6A1P12109 1028 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 FOSL2P15408 326 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 INPP5BP32019 993 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 GCLCP48506 637 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-207ENST00000520168 CWF19L2Q2TBE0 894 aaKnown RBP6.19□□□□□ -1.42
SDCBP-207ENST00000520168 GPAT2Q6NUI2 795 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 LDHAL6AQ6ZMR3 332 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 VPS37DQ86XT2 251 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 FAM151AQ8WW52 585 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 CDX2Q99626 313 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-207ENST00000520168 PICK1Q9NRD5 415 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 CNNM1Q9NRU3 951 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 PRKAG2Q9UGJ0 569 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 JAG2Q9Y219 1238 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 REV3LO60673 3130 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 BDP1A6H8Y1 2624 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 PFASO15067 1338 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 MYH2Q9UKX2 1941 aa6.19□□□□□ -1.42
SDCBP-207ENST00000520168 FRAT2O75474 233 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-207ENST00000520168 OATP04181 439 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 XRCC5P13010 732 aaKnown RBP6.18□□□□□ -1.42
SDCBP-207ENST00000520168 CASP7P55210 303 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 SMAD3P84022 425 aaKnown RBP6.18□□□□□ -1.42
SDCBP-207ENST00000520168 MDM2Q00987 491 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-207ENST00000520168 PABPC4Q13310 644 aaKnown RBP eCLIP6.18□□□□□ -1.42
SDCBP-207ENST00000520168 CCDC57Q2TAC2 916 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 CAVIN4Q5BKX8 364 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 TAF7LQ5H9L4 462 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 MAP3K21Q5TCX8 1036 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms