RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 MRC1P22897 1456 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 ATRNL1Q5VV63 1379 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 USP31Q70CQ4 1352 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 MAGEB6P1A0A0J9YX57 407 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 USP17L3A6NCW0 530 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 USP17L4A6NCW7 530 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 NEURL1BA8MQ27 555 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 EGFRP00533 1210 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 ADH1AP07327 375 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 ARAFP10398 606 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 PTGIRP43119 386 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 KCNQ1P51787 676 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 EIF4G2P78344 907 aaKnown RBP eCLIP4.84□□□□□ -1.63
CPNE3-204ENST00000517862 NR1H3Q13133 447 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 CCDC85BQ15834 202 aaPredicted RBP4.84□□□□□ -1.63
CPNE3-204ENST00000517862 AAK1Q2M2I8 961 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 KANK4Q5T7N3 995 aaPredicted RBP4.84□□□□□ -1.63
CPNE3-204ENST00000517862 SOGA3Q5TF21 947 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 USP17L2Q6R6M4 530 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 MPRIPQ6WCQ1 1025 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 SPOCD1Q6ZMY3 1216 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 USP17L1Q7RTZ2 530 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 ARMC2Q8NEN0 867 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 ANKS1AQ92625 1134 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 SIRT1Q96EB6 747 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 CHAMP1Q96JM3 812 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 NOVA2Q9UNW9 492 aaKnown RBP4.84□□□□□ -1.63
CPNE3-204ENST00000517862 ITPR3Q14573 2671 aa4.84□□□□□ -1.63
CPNE3-204ENST00000517862 SPTBN2O15020 2390 aa4.84□□□□□ -1.64
CPNE3-204ENST00000517862 LOC102724428A0A0B4J2F2 783 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 LOC105371045A0A1W2PR82 267 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L5A8MUK1 530 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 E9PSI1 815 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 F12P00748 615 aaPredicted RBP4.83□□□□□ -1.64
CPNE3-204ENST00000517862 GJB1P08034 283 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 SKIP12755 728 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 SIK1P57059 783 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 SREBF2Q12772 1141 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 CRTC2Q53ET0 693 aaPredicted RBP4.83□□□□□ -1.64
CPNE3-204ENST00000517862 POU5F2Q8N7G0 328 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 PNMA1Q8ND90 353 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 PRSS33Q8NF86 280 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 JDP2Q8WYK2 163 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 PRAM1Q96QH2 718 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 FAM86C1Q9NVL1 165 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 CXXC1Q9P0U4 656 aaPredicted RBP4.83□□□□□ -1.64
CPNE3-204ENST00000517862 ANKRD26Q9UPS8 1709 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 DMXL1Q9Y485 3027 aa4.83□□□□□ -1.64
CPNE3-204ENST00000517862 GVINP1Q7Z2Y8 2422 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 NCANO14594 1321 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 MAP2P11137 1827 aaKnown RBP4.82□□□□□ -1.64
CPNE3-204ENST00000517862 UNCXA6NJT0 531 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 C9orf172C9J069 976 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L15C9J2P7 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L10C9JJH3 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L13C9JLJ4 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L12C9JPN9 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L11C9JVI0 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L21D6R901 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L18D6R9N7 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L22D6RA61 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L17D6RBQ6 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L19D6RCP7 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L20D6RJB6 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 F11P03951 625 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 SCNN1AP37088 669 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 CAP1Q01518 475 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 TFF2Q03403 129 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 KRTAP1-1Q07627 177 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 USP17L24Q0WX57 530 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 TRIM28Q13263 835 aaKnown RBP4.82□□□□□ -1.64
CPNE3-204ENST00000517862 ITPK1Q13572 414 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 PHLDB3Q6NSJ2 640 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 ZKSCAN4Q969J2 545 aaPredicted RBP4.82□□□□□ -1.64
CPNE3-204ENST00000517862 GPRC5DQ9NZD1 345 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 ADGRB1O14514 1584 aa4.82□□□□□ -1.64
CPNE3-204ENST00000517862 MYOM3Q5VTT5 1437 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 ASPMQ8IZT6 3477 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 CACNA1HO95180 2353 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 ZBBXA8MT70 800 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 C2CD2LO14523 706 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 PRRG2O14669 202 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 CAMTA2O94983 1202 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 IARSP41252 1262 aaKnown RBP4.81□□□□□ -1.64
CPNE3-204ENST00000517862 CD97P48960 835 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 SP3Q02447 781 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 FKBP4Q02790 459 aaKnown RBP eCLIP4.81□□□□□ -1.64
CPNE3-204ENST00000517862 ARHGEF6Q15052 776 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 AKNAD1Q5T1N1 836 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 TXNRD3Q86VQ6 643 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 ARHGEF25Q86VW2 580 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 RMDN1Q96DB5 314 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 CARD14Q9BXL6 1004 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 RNF208Q9H0X6 261 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 POGKQ9P215 609 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 SRP68Q9UHB9 627 aaKnown RBP4.81□□□□□ -1.64
CPNE3-204ENST00000517862 FKBPLQ9UIM3 349 aa4.81□□□□□ -1.64
CPNE3-204ENST00000517862 ATXN7L1Q9ULK2 861 aaPredicted RBP4.81□□□□□ -1.64
CPNE3-204ENST00000517862 GNEQ9Y223 722 aaKnown RBP4.81□□□□□ -1.64
CPNE3-204ENST00000517862 DNAH14Q0VDD8 3507 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms