RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 GAS7O60861 476 aa16.14■□□□□ 0.17
TRIO-222ENST00000515144 CYLC1P35663 651 aaPredicted RBP16.14■□□□□ 0.17
TRIO-222ENST00000515144 PPARAQ07869 468 aa16.14■□□□□ 0.17
TRIO-222ENST00000515144 SNX29Q8TEQ0 813 aa16.14■□□□□ 0.17
TRIO-222ENST00000515144 CCPG1Q9ULG6 757 aa16.14■□□□□ 0.17
TRIO-222ENST00000515144 PRR16Q569H4 304 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 FERP16591 822 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 NELFCDQ8IXH7 590 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.13■□□□□ 0.17
TRIO-222ENST00000515144 ABCB5Q2M3G0 1257 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 PLVAPQ9BX97 442 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 PPANQ9NQ55 473 aaKnown RBP16.13■□□□□ 0.17
TRIO-222ENST00000515144 DNM3Q9UQ16 869 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 IBTKQ9P2D0 1353 aaPredicted RBP16.13■□□□□ 0.17
TRIO-222ENST00000515144 SH3BP5O60239 455 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 MAGI3Q5TCQ9 1506 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 GSDMDP57764 484 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 CTR9Q6PD62 1173 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 MRRFQ96E11 262 aaKnown RBP16.13■□□□□ 0.17
TRIO-222ENST00000515144 PPP1R9BQ96SB3 815 aa16.13■□□□□ 0.17
TRIO-222ENST00000515144 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
TRIO-222ENST00000515144 LRMPQ12912 555 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 JAKMIP2Q96AA8 810 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 PUS3Q9BZE2 481 aaKnown RBP16.12■□□□□ 0.17
TRIO-222ENST00000515144 SMCO2A6NFE2 343 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 CHL1O00533 1208 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 FAM193BQ96PV7 902 aaPredicted RBP16.12■□□□□ 0.17
TRIO-222ENST00000515144 SYT1P21579 422 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 SNAP25P60880 206 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 HAUS3Q68CZ6 603 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 KBTBD3Q8NAB2 608 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 GPKOWQ92917 476 aaPredicted RBP eCLIP16.12■□□□□ 0.17
TRIO-222ENST00000515144 USTQ9Y2C2 406 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 SMIM5Q71RC9 77 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 IQUBQ8NA54 791 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 TMEM87BQ96K49 555 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 GUCA1BQ9UMX6 200 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 ATP6V0A2Q9Y487 856 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 SEC24BO95487 1268 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 TECP42680 631 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 PRKAG2Q9UGJ0 569 aa16.12■□□□□ 0.17
TRIO-222ENST00000515144 TNNI1P19237 187 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 PHKA1P46020 1223 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 UAP1Q16222 522 aaPredicted RBP16.11■□□□□ 0.17
TRIO-222ENST00000515144 MSANTD4Q8NCY6 345 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 CLSTN2Q9H4D0 955 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 LZTFL1Q9NQ48 299 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 PPARDQ03181 441 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 RNF187Q5TA31 235 aaPredicted RBP16.11■□□□□ 0.17
TRIO-222ENST00000515144 PPP1R21Q6ZMI0 780 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 ARMC9Q7Z3E5 817 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 ARHGEF12Q9NZN5 1544 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 ICA1Q05084 483 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 TTC38Q5R3I4 469 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 CHURC1Q8WUH1 139 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 MMS19Q96T76 1030 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 NOC4LQ9BVI4 516 aaKnown RBP16.11■□□□□ 0.17
TRIO-222ENST00000515144 SRRTQ9BXP5 876 aaKnown RBP16.11■□□□□ 0.17
TRIO-222ENST00000515144 BLZF1Q9H2G9 400 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 ODF2LQ9ULJ1 636 aa16.11■□□□□ 0.17
TRIO-222ENST00000515144 ABCA8O94911 1581 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 NDC80O14777 642 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 CALUO43852 315 aaPredicted RBP16.1■□□□□ 0.17
TRIO-222ENST00000515144 FAM173BQ6P4H8 233 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 TXNDC16Q9P2K2 825 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 ESPNB1AK53 854 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 GTPBP4Q9BZE4 634 aaKnown RBP16.1■□□□□ 0.17
TRIO-222ENST00000515144 IFNKQ9P0W0 207 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 ANKFY1Q9P2R3 1169 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 E7EVH7 732 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 DYNLL1P63167 89 aaKnown RBP16.1■□□□□ 0.17
TRIO-222ENST00000515144 HERC4Q5GLZ8 1057 aaPredicted RBP16.1■□□□□ 0.17
TRIO-222ENST00000515144 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 AKT3Q9Y243 479 aa16.1■□□□□ 0.17
TRIO-222ENST00000515144 GAS8O95995 478 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 RPL13P26373 211 aaKnown RBP16.09■□□□□ 0.17
TRIO-222ENST00000515144 XDHP47989 1333 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 ROBO2Q9HCK4 1378 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 E7EWF7 191 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 AOC3Q16853 763 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 MARK3P27448 753 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 PPP1R7Q15435 360 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 USP26Q9BXU7 913 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 PABPC4Q13310 644 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRIO-222ENST00000515144 KIFAP3Q92845 792 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 IQCGQ9H095 443 aaKnown RBP16.09■□□□□ 0.17
TRIO-222ENST00000515144 RIMS1Q86UR5 1692 aaKnown RBP16.09■□□□□ 0.17
TRIO-222ENST00000515144 TMEM232C9JQI7 657 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 JAK2O60674 1132 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 OSBPP22059 807 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 REXO1Q8N1G1 1221 aaKnown RBP16.09■□□□□ 0.17
TRIO-222ENST00000515144 PIGBQ92521 554 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 CCDC42Q96M95 316 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 MAP3K4Q9Y6R4 1608 aa16.09■□□□□ 0.17
TRIO-222ENST00000515144 OTUD6AQ7L8S5 288 aa16.08■□□□□ 0.17
TRIO-222ENST00000515144 MIER3Q7Z3K6 550 aa16.08■□□□□ 0.17
TRIO-222ENST00000515144 BRAPQ7Z569 592 aa16.08■□□□□ 0.17
TRIO-222ENST00000515144 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.08■□□□□ 0.17
TRIO-222ENST00000515144 SLC10A4Q96EP9 437 aa16.08■□□□□ 0.17
TRIO-222ENST00000515144 ARPP21Q9UBL0 812 aaPredicted RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms