RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TRPA1O75762 1119 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 ALDH1A1P00352 501 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 ASNSP08243 561 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 CETPP11597 493 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 GABPAQ06546 454 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 SNAPC2Q13487 334 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 CERKLQ49MI3 558 aaPredicted RBP9.93□□□□□ -0.82
CCL28-204ENST00000514421 SBK1Q52WX2 424 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 IFNL1Q8IU54 200 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 IFNL3Q8IZI9 196 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 TBC1D2Q9BYX2 928 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 DNAJC18Q9H819 358 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 CABP5Q9NP86 173 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 SAGE1Q9NXZ1 904 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 KCNH4Q9UQ05 1017 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 AK9Q5TCS8 1911 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 MYO5AQ9Y4I1 1855 aaKnown RBP9.92□□□□□ -0.82
CCL28-204ENST00000514421 PCNTO95613 3336 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 CCL15-CCL14A0A0B4J2E2 113 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 USP17L5A8MUK1 530 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 CDC45O75419 566 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 CYP2D6P10635 497 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 NMIQ13287 307 aaPredicted RBP9.92□□□□□ -0.82
CCL28-204ENST00000514421 CCL15Q16663 113 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 BRI3BPQ8WY22 251 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 FAM227BQ96M60 508 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 PTPN18Q99952 460 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 AS3MTQ9HBK9 375 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 ARPP21Q9UBL0 812 aaPredicted RBP9.92□□□□□ -0.82
CCL28-204ENST00000514421 SWAP70Q9UH65 585 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 AFG3L2Q9Y4W6 797 aa9.92□□□□□ -0.82
CCL28-204ENST00000514421 MINDY4BA8MYZ0 360 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 GDF11O95390 407 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 HSPA8P11142 646 aaKnown RBP9.91□□□□□ -0.82
CCL28-204ENST00000514421 SHMT1P34896 483 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 TDO2P48775 406 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 CDK8P49336 464 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 MFAP1P55081 439 aaKnown RBP9.91□□□□□ -0.82
CCL28-204ENST00000514421 JAG1P78504 1218 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 SPP2Q13103 211 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 ALX1Q15699 326 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 ABCB5Q2M3G0 1257 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 FASTKD5Q7L8L6 764 aaKnown RBP9.91□□□□□ -0.82
CCL28-204ENST00000514421 ZNF280CQ8ND82 737 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 DYNLL2Q96FJ2 89 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 CCDC17Q96LX7 622 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 WDR18Q9BV38 432 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 DIAPH3Q9NSV4 1193 aa9.91□□□□□ -0.82
CCL28-204ENST00000514421 CYP2D7A0A087X1C5 515 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 A0A0D9SFI3 127 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 IGF2BP3O00425 579 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCL28-204ENST00000514421 GH2P01242 217 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 LBX1P52954 281 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 EVX2Q03828 476 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 CWC27Q6UX04 472 aaKnown RBP9.9□□□□□ -0.82
CCL28-204ENST00000514421 CCDC129Q6ZRS4 1044 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 C16orf86Q6ZW13 317 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 ANP32EQ9BTT0 268 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 CFHR5Q9BXR6 569 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 C22orf23Q9BZE7 217 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 NAPBQ9H115 298 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 ZNF287Q9HBT7 754 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 EPB41L4AQ9HCS5 686 aaPredicted RBP9.9□□□□□ -0.82
CCL28-204ENST00000514421 ZCCHC17Q9NP64 241 aaKnown RBP9.9□□□□□ -0.82
CCL28-204ENST00000514421 PRDM10Q9NQV6 1147 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 ZBTB21Q9ULJ3 1066 aa9.9□□□□□ -0.82
CCL28-204ENST00000514421 DOCK2Q92608 1830 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 A0A0G2JLL6 359 aaPredicted RBP9.89□□□□□ -0.83
CCL28-204ENST00000514421 TRIM75PA6NK02 468 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 C19orf81C9J6K1 198 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 BTBD19C9JJ37 291 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 TBC1D8O95759 1140 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 FGAP02671 866 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 SLC3A2P08195 630 aaKnown RBP9.89□□□□□ -0.83
CCL28-204ENST00000514421 HSPD1P10809 573 aaKnown RBP9.89□□□□□ -0.83
CCL28-204ENST00000514421 BACE1P56817 501 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 MOGSQ13724 837 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 RAB3GAP1Q15042 981 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 VPS53Q5VIR6 699 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 PRRT2Q7Z6L0 340 aaPredicted RBP9.89□□□□□ -0.83
CCL28-204ENST00000514421 ANKRD23Q86SG2 305 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 CCDC84Q86UT8 332 aaPredicted RBP9.89□□□□□ -0.83
CCL28-204ENST00000514421 ZNF444Q8N0Y2 327 aaPredicted RBP9.89□□□□□ -0.83
CCL28-204ENST00000514421 FAM43AQ8N2R8 423 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 MKNK2Q9HBH9 465 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 ZFYVE28Q9HCC9 887 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 TSKSQ9UJT2 592 aa9.89□□□□□ -0.83
CCL28-204ENST00000514421 CCDC171Q6TFL3 1326 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 USP17L10C9JJH3 530 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 SMIM22K7EJ46 135 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 MPHOSPH10O00566 681 aaKnown RBP9.88□□□□□ -0.83
CCL28-204ENST00000514421 FOXP2O15409 715 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 EPB41L2O43491 1005 aaKnown RBP9.88□□□□□ -0.83
CCL28-204ENST00000514421 CHMLP26374 656 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 PDE4BQ07343 736 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 PPARAQ07869 468 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 NOM1Q5C9Z4 860 aaKnown RBP9.88□□□□□ -0.83
CCL28-204ENST00000514421 SH3D19Q5HYK7 790 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 GPAT2Q6NUI2 795 aa9.88□□□□□ -0.83
CCL28-204ENST00000514421 TMEM179Q6ZVK1 233 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms